Ates001666.1
Basic Information
- Insect
- Aleiodes testaceus
- Gene Symbol
- bab1
- Assembly
- GCA_963565655.1
- Location
- OY751412.1:4202958-4204720[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.8 1e+04 -3.6 0.0 10 21 92 104 89 104 0.64 2 3 4.4 7.7e+03 -3.2 0.0 5 14 199 208 198 211 0.85 3 3 1.4e-09 2.5e-06 27.2 0.1 2 41 335 375 334 379 0.91
Sequence Information
- Coding Sequence
- atggaGGCATCATCGTCGGAGCAACAATTTTGTTTACGCTGGAACAATCACAAGAGTAATTTACTaacagaattcaatgaattacttCAAAACGAGGCATTTACAGACGTAACCCTCGTAGTTGAGGATGGTCCATCATTCATAAAATGCCACAAGATGGTATTAGCAGCATGCTCAACATACTTCCAGGCGCTGTTCATCCACTTGCCCACAAACGATCAACACCCAGTAATAGTCTTAAAAGACGTTAAATACAGTGAAATGAAAGCAATCCTGGAGTACATGTATCAGGGTGAAGTAAGCATTGCCCAGAATCAACtgagtgaattattgaaagttGCTGATTTACTGAAAGTCAAGGGTTTGGTTGATGACAAACCACTGCGTCCACGTGGTAATTCAATGTCACCACCGCCAGCAATAAGCACCAGTACAGAACGCAGTGCATACAGCAATGACAGCATGCACAATGACATGTCATCACCACCTCACTCAACAAGTTCATCGCCTTATTACTCCTATTACGGAAAATCACCAAGCACTACACCCCAGCAACAATTAACAGCTCCACCAGTCTGGAATCACTTCTCCCGTTTAACATTAGCTGCACAGAGTGTAATGAATTCCCCAATGACACCAACAGCACCATTATTCTCGAGGATATTCGAGAATGAAGAAACCAACATCCGCAAAAAAATGGGCGCCGTTGGTAATAGAGACACGCCAATACTCAGAACTGTACTTGGTGGTCGTGAACATGCTGATAGCTCACAAGGAATTCCAGTGATTCATGGAGATAATCCTGAATTACATAGAAGCAACAGTAATGGCTCGGCTAATGATGGTCATGATGGAAGGAGAAGTAGTTTGGATTTGTCAGGACACAGTGGACACAGTCCGTATCCAGCTGAGGCCTCAATGGAAGATGATGATAAGAAGTACTCATCGATGAGTGGACAGAATAGAAAACACAAAGAGTGGAAACGCTACAAGCAATATTCAAAGGAAGACATGCAGCAGGCAATTGAAGCTgttaaaacccaaaaaatgACTGCACTCAAGGCAGCTGGTATGTTTCGTATACCATCACGTACCCTGTACGATAAAGTTAAGAAAATGGGGATTATAACGCAGCGAAATGGCCGACGCCATTTGAGTACCAGTGGTGCTCATTTTCCACATGGTATTGGTGGCAATAGAAATGGCAGTATTTACAGTGGTATTAcagataatgataatgataatgatcaTCATAGACAAGATAGTATCATGGAAAGCTCATCTGCATTACTTGAATTAGCTTATGGTAATATGCGTGAACAACAAATTGATGACGAGACAATGAGTACTGATACAATTAAACGTTCATCAAGCCCTGATGATGAATCGAATAATGACGAAGAACAGGACAATGATGATCGTGTACAGGATTTATCGGTTAAACGTAAAAATGTTATTGTACCACCGTTAAATCCAATTATCAAAGAAGAAAAGCCAGATGGAACACAGAActga
- Protein Sequence
- MEASSSEQQFCLRWNNHKSNLLTEFNELLQNEAFTDVTLVVEDGPSFIKCHKMVLAACSTYFQALFIHLPTNDQHPVIVLKDVKYSEMKAILEYMYQGEVSIAQNQLSELLKVADLLKVKGLVDDKPLRPRGNSMSPPPAISTSTERSAYSNDSMHNDMSSPPHSTSSSPYYSYYGKSPSTTPQQQLTAPPVWNHFSRLTLAAQSVMNSPMTPTAPLFSRIFENEETNIRKKMGAVGNRDTPILRTVLGGREHADSSQGIPVIHGDNPELHRSNSNGSANDGHDGRRSSLDLSGHSGHSPYPAEASMEDDDKKYSSMSGQNRKHKEWKRYKQYSKEDMQQAIEAVKTQKMTALKAAGMFRIPSRTLYDKVKKMGIITQRNGRRHLSTSGAHFPHGIGGNRNGSIYSGITDNDNDNDHHRQDSIMESSSALLELAYGNMREQQIDDETMSTDTIKRSSSPDDESNNDEEQDNDDRVQDLSVKRKNVIVPPLNPIIKEEKPDGTQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00048062;
- 90% Identity
- iTF_00048062;
- 80% Identity
- iTF_00048062;