Ates016324.1
Basic Information
- Insect
- Aleiodes testaceus
- Gene Symbol
- bab1
- Assembly
- GCA_963565655.1
- Location
- OY751428.1:1847159-1849441[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.00014 0.25 11.2 0.0 3 42 194 233 192 235 0.85 2 4 2.2e-12 3.9e-09 36.2 0.0 2 38 243 278 242 284 0.87 3 4 0.0018 3.2 7.6 0.0 8 33 301 325 298 330 0.72 4 4 4.6e-11 8.2e-08 32.0 0.0 4 40 357 394 354 399 0.88
Sequence Information
- Coding Sequence
- ATGTCTGAAGCAACGAATCAACCTCAAATACAACAGAGTTATTGTTTCAAATGGAGCGATTATCAGAATCATTTGTCGGGTGTTGTTAAACAGTTGTTGGATGAGGATTGTATGGTTGATGTTACATTGGCAGTTGGTGGTGAACGCATCCGTGCACATCGAATTGTACTATGTGCCTGCAGTACGTTATTTCAAGAGATTCTGAGTGAAACAAAAGAGGATCATCCAACCATAATAATCAGCGATATATCTCCACAGGATGTCAGATCAATTGTGCAATTTTCGTACCAGGGGGTGGTCAGGATCCCAGTTGAAAACATATCTAATTTATTGGATGCAGCAAAATTACTGAGGATAAGTGGATTAATGgagATCGACGGACTCGACGAGAACGACACAATCATCAGCAAGGAACTAActgaggaaattgaggaagaatTCGATGAATCTTGTGATAAAGAGACCCTCGAAGCGCTGGATGGAGACGAATTATGCAATTCTGGACTAAACGACGACAATTCCAATGAtgcgaagaagaaaaaaaagaagagagatccGATCAAGAGGGATTACAACGACGACATGTTGGAGCGGGCTATAAACGACttgaaaaatggtaaaacaCTTGTGGAAGCTTCTACAAACAATCATATTCCTCGATCCACTCTCTACATGAGAGCAAAGTCCCTCGggattcaattgaatgcaTCGAGAAGCGAATATCCTCCAGAGTGCATGAAAGCTGCTATAAACACTGTACTCAATGGTTCAAGTCTTCAACATGCTTCTGAAATGTACGGAATCCCAAAAACGGTTCTCTGGAGGCGAATGCAGAAGGAGGGATACCAGATCATCAGATCAGAGATGAAGAGATCGTATGGTTCTGAGAGAAGAGAAGCTGCTATAAAGGCACTTGCGAGAGGAGAGAATTTAACGACAGTTGCACATGAAtataatataCCAAAAACAACGTTGTTCAGAGATAAAACAAAGCTCGTAGGCGAAGGAAAATTGCCTGAGTCGTTCTGGAAGAAGCGAAAGGGTGATGATGAGGAATTAAAGAAATCGAGACTGGAAAAAGCTGTTGCAGCCTgtaaagatggaaaaatgtcacaGGCAGCAGCTGCAGTAGCCTATCGCATCCCGAAAACCACAATCTGGCGTAAATTACAtcaagaaaatggaaaactcGATAATTCTGGACACAGAAAAAAGCAGAaagtggagaatgaaaagagtaTAGAGAAACCGGAAGCTGCTGACGAATTTACTCTTTGCGAAGTTTCATCAGAGATTCCCATCACCTACATCGACGAAAACAGTATTCCTCAAGACTCAGTGATTATTCTAACGACGGAAGACGTCGACGATCTCAATTTAGAAGACGAACGCCAAATAATAGTTACCGCAGATTCCGCTCAGGAATTCGTTCCCTGCACTATGAGCATCGACGAGGACTCAAATTACACTTCCACAGAAACCTAA
- Protein Sequence
- MSEATNQPQIQQSYCFKWSDYQNHLSGVVKQLLDEDCMVDVTLAVGGERIRAHRIVLCACSTLFQEILSETKEDHPTIIISDISPQDVRSIVQFSYQGVVRIPVENISNLLDAAKLLRISGLMEIDGLDENDTIISKELTEEIEEEFDESCDKETLEALDGDELCNSGLNDDNSNDAKKKKKKRDPIKRDYNDDMLERAINDLKNGKTLVEASTNNHIPRSTLYMRAKSLGIQLNASRSEYPPECMKAAINTVLNGSSLQHASEMYGIPKTVLWRRMQKEGYQIIRSEMKRSYGSERREAAIKALARGENLTTVAHEYNIPKTTLFRDKTKLVGEGKLPESFWKKRKGDDEELKKSRLEKAVAACKDGKMSQAAAAVAYRIPKTTIWRKLHQENGKLDNSGHRKKQKVENEKSIEKPEAADEFTLCEVSSEIPITYIDENSIPQDSVIILTTEDVDDLNLEDERQIIVTADSAQEFVPCTMSIDEDSNYTSTET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00048077;
- 90% Identity
- iTF_00048077;
- 80% Identity
- iTF_00048077;