Basic Information

Gene Symbol
JARID2
Assembly
GCA_963565655.1
Location
OY751414.1:5666983-5672729[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2 5.4e+03 -2.0 0.3 49 83 156 191 153 192 0.73
2 2 6.2e-23 1.5e-19 70.3 0.0 6 89 1344 1425 1340 1425 0.94

Sequence Information

Coding Sequence
atgGTACTCGGACGTAATGacaaaagaaagagaaaggaGGGTGACTTGGTGGACCTCATGGACCCAACATCAGGAAGCCCAAAAAGGGCAAAGGTCCATGCACAAAGAAAATTTGCGCAGGGAGTAACAACTGTCTTCAGTCCAGTGCCTCCACTGCTAAAAGAGAAGGAGAGGCCACGTTCAACAATGGTCACCGAATTAATAACCCACAAACGCCCGAATACCGAGGATTTCCTGACGTTTCTCTGCTTCAGAGGCACGTCCATCTTGCCCCCGAGCCTGAACTTCTTCAATcaaggaaataaaaaggagaaaacagATCCAAAGTCACGTAGATCAAGTGCAACTCCCGTAGCTTCTTCCACACAGAGCACTCCACCGGTTCCATCGAGTGGAGGTAAATCCGAGGGTAATCCTAATAATTCCAGCACAATTCAATCATCTAAGCCAGTAGCTTCAACTCCAGTCTCTAGTAAGAAGAAATTCACTGATGTTATTAAGAAGAATGTTAACGTCAACAAGTACAAAACAGCGACGTCGACGATTCAAGctttaaagaagaaatataAAGAGCAGAGACTAGCGAAGCAACggattgagaataaattcaagacTTCAGTGATGAGGACAAGATCAGCAGCTAGTCGTGCGTTATTGAAGCCGAGTAAGATTCTGCAGCGGATAGAGAAGAAGAGCCTCTGTTTAAGGAGCAGTGGTGCTATTGTGGATAAGAGCAAGATGATAGGATCAAAGAGCAGTAAATTGTTgccaaagaagaagaagattgGGTTGAAGAAGAGAGCTGCAGAGAGAAGTGAATCGTCGAGTGGATCAGTTTCTGATGACAGTCCATCGGAGGTTTCAAAGAGAACCGTTAAATTGAAGACAGGACCTGGAAAACAAGCGAAAGGGGGAAATGTCAAGGGAAAGACTGTTTTGGCTACTGCTAAGAAAAAACCGGAACTGACGAGACGAGTGACTCGATCACGTTCTGAAACAACTCCTAATACGACGCAGATGAGTCAGAGGCCATCGAGAAAGACTAAAGAAGCTGCTGCTGTTTATATGGAGATTTTGAGTCGTAAATTAGTGAGTCCTGATTTGgagaatgatgataatatGTCGTTGGAGAGTTTTCCAGAAGTGCCGAGCTCTCGGAGGGACTCGTTGGCtaaaaatgtggagaatgagaagaagaagaagctgattaagaagaaaattggGGAGAATATTAGtggaaaggagaaaaatgttAAGGGCACAAGCCAGAAGGCTCCTGTTAGAGTTAAAAAGTGTGTTAAAGCTAGTAGAGACTCTGAGAGTGATGATAATGAGTCAATTGCATCTGAAAAGAGTCTAAAAGTTGGAAATATGAAGACGAGAGCTGTAACGAGACGTAACAGTAGTTTGCAGCAAGTTCAATCGTTAAATCGTAATTTACGTTCATCCAGAAGTGCATaccaaaaaattgagaaaaataaattaaataatcaagctAATGtgataaataaagagaagaaattgaatattaaacgTAGAAATGATGAATCAATTGGAAGAGATTCTGGTGAGAGTAATGTTAAATACGAGGgtgagaaaaaggagaagagactGAGAAAAAAGGGTAATGATAATGGTGAATCTGATGAAGAGCCACTTGGTAAAGTACTGAATAGAATCAAAAAGGATAAAGTATCAAAACCATTGATACTAGCGCGACGTGCaccaattaataataaaacaaatgaaattaagaaaattgaatcaagtGAACCtgtgataatgataaagaaaattaataaaattggaattgatGCTGTTACAAAAGTATCTGATGATGAGGGATCATTTCGTGGATTCAGTAAAAAGTCAATTAAAAGTGTTACTAATTCATCATCAGCCAATGATAATGATCTTTCATTAGTTATTGATTCTAAAGAGACTGATAGTAAATTAgatttattaaagaattacgagaaaattaaattagaagGAAAGAATGAATCTGTTAAAATAATGAGTACAAGTGGAGTCAAAGGTAAACCATCATTagctgataaaataataattccccaattttttccaaaaaatttagCACCAAGCGTCTCAAGTACTCttccctcttcttcattaacaattaatgagaaaatgcagAATATCATTGGAGTACCATCGACAAAATTAATCAGTCGTAAGGAACGTGTTAATATGTCTGCTGAGGAGATTGAAAAATGGTTGGACAACAGTCTACTGCTTAATGAAGAGAGCAAAGCTGAGATGGAGACTGTAACTAATTTTTCCTATGGAATAGAACCCGAGAAGACTAAATTAGATACTTCTACGTCGTGTCATTTATCGATACCAACGAGAATTCAGCATTTGGTGAGACCAGTAAACGTGGCGATTGCTAAAATGGCTGATAAACAGTTCAACATTGAATCGAGTCAGAGTATGGATAATCACATGAAGACGGATATAATAGTATCGAGTACTGGGATCGCTGTGGCTAAACCGATCAACATTCCGACtcatagaaataaaataaacgccGACATGAAAGAGATCATAAAGGGGAGAACTGTGAAAAATATCCTGGATTTAACGCCTGACAAAACAGTCTCTCCTGCAATTGACCAGAATGAAACAACCCTGAAGAGCACCGATGATAGTGACACTTCTCCATCATCAATCGCCGacaaaataaagaagaaatccCAACCACAGCAACGTAAAACATTTCTATCAAAAACGAAAGAACGTAAACTCTCAACTCCGAATTCAAACGCATTTTCCCCGGAGAATGAGAGCAGTGTCTATGCATTTGAGAGTGAGACAGAGACACCAGTGAGCACTCCATTCAGACGAAAAGCTCGGGATAGTAAGATTGATACTCCtgagaagaatgaagagaagagtACAAGTGATGTTGGTTCTACTGCCAATAATAGTTCAAAAGAAGAGGATAAGAGTGTTAATTCATCGAAAGAAGGTTTGAAGAACCTTCCGAATGCTAAACTTCTTCGGTTTGATAATATCCCAACGGGTTGGAACAATCTGAGCTGCGGGAATTCCATCGCAGTTCAGGTGAACTTCGACGACAGTCAAGAATCCCAAGAAATTCATGTTCAATCACGTGAGAATAATGATTCCGAAGAGATTACCGAGAgaagtgatgataaaaattgtgataataacACCAGCACTGAGATTTCCACACAGACTGACAATGCTAACGATAATGAGGATGATAATACTCAGGTATTTTATATTCCCTTTGAGACAGTCGGAAGAAATATCTCACATTTATCAGCTCTTCAGGGACAGCCTCTGATCCAGGGTGTTGCGGTTAAACTGGGGACTGAGGGAGCGAGTGGACCGAATCAACGAGTCTTGTTGAGGGCTCAATTGGTAACGAAGCCACCGATGACTGTCACAAGATGTCCACCAGTTGGGACAGTCCAACCGACGACTAGAGCACCTCAGAGTACTTTAGACTCAGTTCCCTCAACCTCTTCATCCACAAGCGCATCTTCAGCCCAGGCTCTTCAAACCAGAAGCACCGGCACCGATTCAGCCCCAGAAAAGCCCAAGAAACAAGTAAAAACTGTGTCTCGTGCTAAGAAGTTATCAGCCTCTGATTCCCCATCGACAATAAAAGCCgcagagaaagagaaacgTCGGCCTGGAAAGAAAGTGAAAAAGACATCGATATCCTCATCAGAACCCGAGCAATCCTCCATCAATCAAGACGCCCATTCTTCTCTAATGTCCAGTAGCTCCATAACAAACGACAAATCAGAGGCGAGACTCGCTGATGCTCCCACGTTTCACCCAAGCGAGAAAGATTTCCAAGATCCTCTGGAGTACATCGAGAAAATTCGTCCTTTGGCTGAGAAATACGGGATCTGTAAAGTAGTTCCACCTTCCAACTTCAAACCAGAGTGCAAGGTCTCCGACGACATGAGATTCACAGCGTACAATCAATACGTCCATCGGATGCTGCACAGATGGGGACCGAATGTGAAAGAGATGATGGCGATAAAGAAGTACTTGGCTACGCAATCGATCACTTTATCCCAACCGCCTTGGATAGGCGGCATGGAGGTTGACCTTCCCCATTTGTATCAGACTGTGCAGAGTTTAGGGGGATTGAAGGAGGTGATCGAGAAAAAGAAGTGGCAGAAGGTTGCTGATGGAATGAAGATCCCGAAATCGGCGCAGGATCGAGTGACTAAACTCGACGATATCTACTGCAAGTATCTCCTCCCCTACGACACTTTATCAACAGGCGAAAGGGAGAAGCTCTTCGAAGACGTTGAGAAAGAGTGGAGAAAACGGGAGACCAAAGCCCTGGAGCGATTGAACGACTCAACGACCTCTCTATCCTCTCTCGAAACGAGCAATGACGACGAGGATGACGACGACAGTTCCGATGAGATAGAAGAGTGCATCGTCAAAGGCAGAAATATGCCCCTGAATGCATTCTACAGAATAGCGAGAAACACCCAGCGCATGTGGTTCGGAGAGACCCAGAGGAACAACCAAAATGAGATGGAAGGGGCCTCTTCCAGCGAAGTTGAAGCAGCCTTCTGGAAACACGTGTCCGAACGAAAGAGACATGTCTGCGTTCATGCGGCTAGTATTGACTCCAGTGGCCGAGGTTTTGGGTTCTCCGTGGCTAAGAATAGTCCATTCGCTCGTCACCCCTGGAACCTCAAAGTCCTGACGAATAATTCAGGCTCAGTTCTACGTGCACTTGGACCTCTGATGGGTGTGACCATTCCAACGATTCATGTGGGCATGCTGTTTAGTGCCTGTTGCTGGTATCGTGATCCCCATGGGCTTCCTTGGATCGAGTATCTTCATACAGGTGCTAAGAAGATCTGGTACGGCATACCGAACGAGTACAACGATAATTTCAGAGAGGCTCTGTCTAAAATGGTGCCGAGATTCTGTAAAAACAAGACCATCTGGCTGCCATCAGATACAGCTATGGTTCCTCCGGAAATGCTGGTGAGCAACGGCGTGCCTCTCTGCCGAATCGTTCAGGAACCCGGACAGTTTATCATCGTATTCCCAAAGGCTTTCACCTCCAGCATATGCACTGGTTACGTTGTGTCGGAGAGCGTTTATTTTGCGCAGACAATGTGGCTGGAGAATGCTGAACAGATATTCAAGGATCTTCAGGACAGCTGCGAACCCTCGATGTTCTCCTTTGAACAATTGTTGTTCAGTATCATCAATGACTCGAGATCACACGTTGATATACTGAAACAGATACTACCGGTTATGATGAAGATCAGGGAGAGGGAACTGCATCATAGGCAACAGCTGGAGTATTATGGattgatgaaaatggagaaattaccACTGCCCGATAGTGGAAAGAGGAAGAAGGCACTCAAAGTTAAGGATGATGATGGGGACTTTGAGTGCGAGACTTGTAGGATGAATTTGTTTGTTTCTTTGGTGAATAATTCGTTGGATGATAGTGCGTACTGTCTGCCTCATGCTCTGCAATTAATCGCGAGGAAGAAGCAAGTTCTGAAACACTGTACTTTGAAGTATACTTATAATGAGGACGAGTTGGACGATTTGATACACAAATTGGAGGACAGAATTGAGGCGAAATCGAAGAAGAAACAATCAAAACAGTCATgctag
Protein Sequence
MVLGRNDKRKRKEGDLVDLMDPTSGSPKRAKVHAQRKFAQGVTTVFSPVPPLLKEKERPRSTMVTELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNQGNKKEKTDPKSRRSSATPVASSTQSTPPVPSSGGKSEGNPNNSSTIQSSKPVASTPVSSKKKFTDVIKKNVNVNKYKTATSTIQALKKKYKEQRLAKQRIENKFKTSVMRTRSAASRALLKPSKILQRIEKKSLCLRSSGAIVDKSKMIGSKSSKLLPKKKKIGLKKRAAERSESSSGSVSDDSPSEVSKRTVKLKTGPGKQAKGGNVKGKTVLATAKKKPELTRRVTRSRSETTPNTTQMSQRPSRKTKEAAAVYMEILSRKLVSPDLENDDNMSLESFPEVPSSRRDSLAKNVENEKKKKLIKKKIGENISGKEKNVKGTSQKAPVRVKKCVKASRDSESDDNESIASEKSLKVGNMKTRAVTRRNSSLQQVQSLNRNLRSSRSAYQKIEKNKLNNQANVINKEKKLNIKRRNDESIGRDSGESNVKYEGEKKEKRLRKKGNDNGESDEEPLGKVLNRIKKDKVSKPLILARRAPINNKTNEIKKIESSEPVIMIKKINKIGIDAVTKVSDDEGSFRGFSKKSIKSVTNSSSANDNDLSLVIDSKETDSKLDLLKNYEKIKLEGKNESVKIMSTSGVKGKPSLADKIIIPQFFPKNLAPSVSSTLPSSSLTINEKMQNIIGVPSTKLISRKERVNMSAEEIEKWLDNSLLLNEESKAEMETVTNFSYGIEPEKTKLDTSTSCHLSIPTRIQHLVRPVNVAIAKMADKQFNIESSQSMDNHMKTDIIVSSTGIAVAKPINIPTHRNKINADMKEIIKGRTVKNILDLTPDKTVSPAIDQNETTLKSTDDSDTSPSSIADKIKKKSQPQQRKTFLSKTKERKLSTPNSNAFSPENESSVYAFESETETPVSTPFRRKARDSKIDTPEKNEEKSTSDVGSTANNSSKEEDKSVNSSKEGLKNLPNAKLLRFDNIPTGWNNLSCGNSIAVQVNFDDSQESQEIHVQSRENNDSEEITERSDDKNCDNNTSTEISTQTDNANDNEDDNTQVFYIPFETVGRNISHLSALQGQPLIQGVAVKLGTEGASGPNQRVLLRAQLVTKPPMTVTRCPPVGTVQPTTRAPQSTLDSVPSTSSSTSASSAQALQTRSTGTDSAPEKPKKQVKTVSRAKKLSASDSPSTIKAAEKEKRRPGKKVKKTSISSSEPEQSSINQDAHSSLMSSSSITNDKSEARLADAPTFHPSEKDFQDPLEYIEKIRPLAEKYGICKVVPPSNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLSQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSTGEREKLFEDVEKEWRKRETKALERLNDSTTSLSSLETSNDDEDDDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGETQRNNQNEMEGASSSEVEAAFWKHVSERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNSGSVLRALGPLMGVTIPTIHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPNEYNDNFREALSKMVPRFCKNKTIWLPSDTAMVPPEMLVSNGVPLCRIVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQTMWLENAEQIFKDLQDSCEPSMFSFEQLLFSIINDSRSHVDILKQILPVMMKIRERELHHRQQLEYYGLMKMEKLPLPDSGKRKKALKVKDDDGDFECETCRMNLFVSLVNNSLDDSAYCLPHALQLIARKKQVLKHCTLKYTYNEDELDDLIHKLEDRIEAKSKKKQSKQSC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00046743;
90% Identity
-
80% Identity
-