Basic Information

Gene Symbol
ARID5B
Assembly
GCA_963565655.1
Location
OY751412.1:7239190-7255078[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2e-24 4.9e-21 75.0 0.0 2 89 308 393 307 393 0.95

Sequence Information

Coding Sequence
atgtctGTATGCAGATTACTGGGTGGTGCCTGTTTCAGTCATGGCCCATACACATTCTACAAAGCCGTGAGAATCGGCAGTGGACGTGTTTTACGACTtggtagtttttttttaacaaaattgtGGACTGATGCGGATTTAGTTAGTATCGGTGAACTACAGCTGCTATGGATAGACAGCAGGGGCTCCAATCAGCCATTAGCATCGTTGAGGCTCTACTTCCTGCCTGAAAATACTCCGGATGGACGAAGGGATACTCACGGGGAGGACGAAGTGTTAACAATATCAGAGAAGGTTGTTGTTCGTGTCCACGATTTGGTGACATGGCTGTCACCCTCTTTGGAGTGGTCATGGGGTCGAGAGGTGTCCTCTCCTCCATCAACGGAGACAGGGCAAATTAGCGATGAGAAATTTGAGCCACAGCCACAGGTCCTGACAGATCCTGGTATCGATTTTTCCGACGTTGATAAGCAGCAGAAAGATTACGAGGATAATGGGAATTATGGGAGGAAGAATGAGGCAGTCACACAGACTAGAGTTGTAGTCCTGTCTTATCCGAGGTACTGTAGGTATCGAGCATTATTAAGAAGACTGGAGGGTGCTGAACCTGCTTGGCTATGCTCTTCAATCGCTGCTGCACTCGGAGGATTCACTGCACTTCCTGGGACGAGAGTtctcttttgtagagacaCTTTTGATTATCCAGATTTGGAGACACATGAATTATTGTGCAATCATTTAGcgCCTAAATTGAAAGGGAGACCACGAAGAAAACGCAAAAAGCGCAGTGCTTCACCGGGCGAATCGAGCAACGAGAGCGAAGCATCAGTAGCCTCAACCTCACAGAGTTCTATATCAAATTCGACGTCCAAAGATTCATCGAGTATCGTGAGACGAAGTGAGCGAAAAACTGGATTTGATGAGAAGAAATTCCTTATTGATGTGCAGAATTTTATGAGCTCACGGGGAACCCCCGTTGGGAAAATGCCGTTACTTGGATACAGACAAAttGACTTGTACTCGTTTTACTCGAAAGTACAAAAATTAGGTGGATACGATTCAGTGAGTGCTGGAAGATTGTGGAAGTCGATTTACGATGATATGGGGGGCAATACGGGATCAACGAGTGCAGCTACGATAACGAGACGTCATTATGAGAGATTACTGTTGCCGTACGAGAGACACCAGAAGGGCTCGGAAACAAAAGTGCGACCAATAGGAAGAAGAACAAAATGCACGTGGGAGGAATCCATAAACATTAAATCGGAAAGAGCCGGCTCTCCTCCACAAAATCGAACCTCAACTCCCTCCCCAACTTCTCCACAAATGCAAAAGTTATTCACAACAATGTCAAATCTCCCTGGACTTGATAAACCAAAGTCTGAAGTAAAACCTTCATCTCTCCGAAGCGTTCGAGTGAAACCAGAACGTCTAAAATCTCTCaatacaataatttcattgaatccgTCGAATCCACCGACTCCTCCACCATCATCAAACACTTCAAATACCTCATCAAGCAGTACAACACCATCGACAACACCAACAGGAAATGCGAGTGCATTGGAAAGGCAACTCAATAGCCCTCTCATGAGCCAACAACAACAGTCAtctccttctccttctcctccttCAGAAATCTCACAGAATCCAAACACAGTCATAACTCTGACTCCACCACCCGAGAAAGATTTAAAGGAAATGACACTGGATAGTCAAAATCTGAAGCAAACTCCAGCCAtcatcaccaccaccaccaccaccacaaACCTGCTGGCTCAGGGAAAAGAAAACATACCTCTTTTTGGTGAGAAAGCACAATTCATGAACTCCGAGAGGATAAATCCCCCGAAATCACCAGAAGTCATTGATCTCGAGCTAGAGAGTGATACGAGtagagataaaataataattccatcattcaaaaaacgaaaactcgAAATTCTCCGAGAAGGAGGCCTCGAGGTCACTGCAGTCGAGTTGGATACAAGACCGAGTGTTATCCAGGCAACAATAACTCCAGTTACAGTACCAATGAGCCCGAAAAAAGAAGATCGTATCACTTACTCATCGTCATCTGGAAATAGCCCAAATATTTCAGTACCAAAACTCATTTCCGTAACAGTAACTCCTGATATTGGACATATGCTGCCATCACCagtagaaataaataatcagcCACGATCTCTGAAGATACACAACAACAATTGTAATTCAATCgtgaataataatagtaatagtaataatgataatagtgATAGGATAGATGATGATAGTGATAAAagtataattaatgataatagtaataataacaGAGTCATTAATCTAGGaacatcaaataattcaaatctcCTTCAGCTTTACGCAAGTGCTGGCTCTGGTTTACCAAATTCTCCAGTGGCATCAAGTAGATTCAACAATTCCAATGACAGAATTCTCCCACCAAAAGTCACACAATCAAGATCAATATTCGCTCACAATGAAAGAACAGTCTATGGTAATCCAAAGGAGATTTTAGGACATCAGAAATATCATCAAACTGTTGAGCAGAgtgtgaattcattgaatccaaCTGGAAGTGTCCTCGATTTAACCGCAAAACAATTAgacaaaaataaaggatttgcAAGGCCGAATTTGGAGATTGTGAGAGTACCAGTGGTCCCACGACCTAATCCCATGAATCTAGAGATGAAGCCTGTGTCATCGATGAAGGACAATTCATCAGAGTCTCCACGAAagaattccttcaattatcCAATGCTCGACAGTCGCACAATGGCCTCGAATAATCTCGAGATAACCCTTGTCAACCCCAAATTGAAGCCATCAAGCCAATTACCTAGTCCAGTTAAAAACGGAAATTCAATATCTAATATTAACAATATAAACGTGAGTCTGCAGGGTCAACCCCTGAAGAATGGAAAGTTTCCGTCTAAACAATCcgataataattcatctccATATCCATCACGAAAATCAACTGGTCATCAAGTGATTCCGAATATCCCCAATCTCAATCACATTGGCGCCTATCCTCCGAGAGTTATCCATCAACAATCAGCAATTGATAAGCGAACCGACATGAGAGATCATCAATTGACAATGGAGAACGACAAgtttgctgctgctgctgctgttgctgctcaCAAAGCCCAGAGGAGAGACGACAGGAGGCACAGCATGCCGAATATTCCTTCCAGCTTTGTCTCAAGTCTTCCTCACAATTCTGGATTCATCAATCAATTGCCAAACACCGGAAAATATCTACCAGGCAGCATGACGATGCTCGATCCTGTCTACTATTCCGCCATTTACAATGGACTATTTCCACCGCACATACCACCACCCAGTCCCTTCTTTCCACCGGAAATGAGGGCCTATTACAAGGAATTacttgagagaaagaaaaggatGCCAATGAGCCAACCTGTTATTCCTACCTCCAAATGA
Protein Sequence
MSVCRLLGGACFSHGPYTFYKAVRIGSGRVLRLGSFFLTKLWTDADLVSIGELQLLWIDSRGSNQPLASLRLYFLPENTPDGRRDTHGEDEVLTISEKVVVRVHDLVTWLSPSLEWSWGREVSSPPSTETGQISDEKFEPQPQVLTDPGIDFSDVDKQQKDYEDNGNYGRKNEAVTQTRVVVLSYPRYCRYRALLRRLEGAEPAWLCSSIAAALGGFTALPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASTSQSSISNSTSKDSSSIVRRSERKTGFDEKKFLIDVQNFMSSRGTPVGKMPLLGYRQIDLYSFYSKVQKLGGYDSVSAGRLWKSIYDDMGGNTGSTSAATITRRHYERLLLPYERHQKGSETKVRPIGRRTKCTWEESINIKSERAGSPPQNRTSTPSPTSPQMQKLFTTMSNLPGLDKPKSEVKPSSLRSVRVKPERLKSLNTIISLNPSNPPTPPPSSNTSNTSSSSTTPSTTPTGNASALERQLNSPLMSQQQQSSPSPSPPSEISQNPNTVITLTPPPEKDLKEMTLDSQNLKQTPAIITTTTTTTNLLAQGKENIPLFGEKAQFMNSERINPPKSPEVIDLELESDTSRDKIIIPSFKKRKLEILREGGLEVTAVELDTRPSVIQATITPVTVPMSPKKEDRITYSSSSGNSPNISVPKLISVTVTPDIGHMLPSPVEINNQPRSLKIHNNNCNSIVNNNSNSNNDNSDRIDDDSDKSIINDNSNNNRVINLGTSNNSNLLQLYASAGSGLPNSPVASSRFNNSNDRILPPKVTQSRSIFAHNERTVYGNPKEILGHQKYHQTVEQSVNSLNPTGSVLDLTAKQLDKNKGFARPNLEIVRVPVVPRPNPMNLEMKPVSSMKDNSSESPRKNSFNYPMLDSRTMASNNLEITLVNPKLKPSSQLPSPVKNGNSISNINNINVSLQGQPLKNGKFPSKQSDNNSSPYPSRKSTGHQVIPNIPNLNHIGAYPPRVIHQQSAIDKRTDMRDHQLTMENDKFAAAAAVAAHKAQRRDDRRHSMPNIPSSFVSSLPHNSGFINQLPNTGKYLPGSMTMLDPVYYSAIYNGLFPPHIPPPSPFFPPEMRAYYKELLERKKRMPMSQPVIPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00045921; iTF_00046741;
90% Identity
iTF_00045921; iTF_00046741;
80% Identity
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