Alep024765.1
Basic Information
- Insect
- Aleiodes leptofemur
- Gene Symbol
- -
- Assembly
- GCA_963942555.1
- Location
- OZ012621.1:4172398-4178002[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.00081 0.12 13.7 0.7 1 20 141 160 141 162 0.95 2 20 0.0063 0.94 10.9 0.6 2 23 167 189 166 189 0.96 3 20 4.8 7.1e+02 1.8 0.2 5 20 484 499 483 500 0.92 4 20 0.057 8.4 7.9 1.4 2 23 510 531 509 531 0.95 5 20 4 6e+02 2.1 2.1 3 19 560 576 559 578 0.91 6 20 0.73 1.1e+02 4.4 0.1 3 21 674 692 672 693 0.91 7 20 1.6 2.3e+02 3.4 0.5 3 23 702 723 700 723 0.92 8 20 0.015 2.3 9.7 2.1 3 23 734 755 732 755 0.94 9 20 0.0094 1.4 10.4 0.2 2 20 777 795 776 797 0.93 10 20 2.1 3.1e+02 3.0 3.2 1 14 804 817 804 827 0.75 11 20 4.4 6.6e+02 1.9 5.5 1 23 838 861 838 861 0.91 12 20 0.0014 0.21 13.0 0.4 1 23 878 900 878 900 0.96 13 20 0.012 1.7 10.0 3.9 1 23 906 929 906 929 0.98 14 20 0.12 18 6.8 0.2 2 23 939 961 939 961 0.96 15 20 0.0013 0.19 13.1 0.3 1 23 1028 1050 1028 1050 0.97 16 20 0.27 40 5.8 1.4 2 20 1173 1191 1172 1193 0.92 17 20 0.0089 1.3 10.4 1.0 1 23 1200 1222 1200 1222 0.96 18 20 0.25 37 5.9 1.1 2 22 1233 1253 1232 1255 0.83 19 20 1.9 2.8e+02 3.1 1.2 3 23 1357 1378 1355 1378 0.93 20 20 0.0084 1.3 10.5 1.0 1 23 1444 1467 1444 1467 0.95
Sequence Information
- Coding Sequence
- atggcACGTGCCAATATCTTCAAGGGCTCATCGAGCATGGTTCCAGTCGAAAATGCAGCAGACGAGCGCGACCCCTTGGATCCTGGTATAAAAAATGAGCCAACAAGTCCAACAATGGTTCATCCCGAGGAAACTGATACACCTGAGCTTCTCTCCGAGCTCGAGGCAATAGAAGCAAATGCCTCAAGTCAAAGAGCCATGGATTCCCATCAACCAATGGAAATCGATGTTGCCGAGACACTAAATACACCTGTTACATCAACGAGTAAGCAACAAGGAACAGAtataatcgatgaaaaaaaattaacacgtGTCCGTAGAAATCGACGTGCATCAGCCAATGATTCCGTCACTAATGACCAAGCAATGGCCAGATTACGTTGTAGATCGTCATTAGGTGTTCCATCGTTATGGCCAGTTTTCGAGTGTGACATTTGTTTCAGATCATTTAACAGAGAACGTGATCTAGCAAAACACAAAACATATTATAAGGCACTTAGATGTAGTAtttgtgagaaaaattttgattcagcTAGGAGTATAATGTTGCACAGAAAAAGAGTACATCGTAATGTTAATTGGCAAAGATACAAGTGTAAAtgtcatttttgtaatttaacaATCGGTAAACGTACGTCATTGCAGTcgcatatatttcattttcatggaaatcaaGAAGAGCCCATAAAAACGCATAGAAGATCGAGAGATGTCAAGAGTGAGATGATTCAGGGTGAATTGTCTGGGTCAGAATCAGCTAGAGCCGCGAGAAAGAGAAAACGCGATCAATTGATTGAGGATAAAAaggaattcaataatttgcCATCAAATACTAGTGCTCCATCTCAGGAGAGTAGTAAGTCTGATTTAGGTGCTAGATCATTGGAGGATAAGAGTGTTAATCGTAGATCACAGAATAGAGACAGGCCACTCGTTAAAATTCATGCGATACCCCACGAGGTTGAGGCATTACTGAGCGATTATGATGAGAGCTCAGTGAAAAGGCGAAAGATCGATCGTGCAGGAGACGTTAGGGTTGAGAATGTTAGAGATCGGCGATTGCGATCCGGTAGACTGCGTAATGAATCAACCCCCGGGGGAGAAGAAAATCCTGAGATTAACGTTGAATTACCTAAAAATGAGGCTAAAGAAATGCCACAAGTCAAAAAGACAGATCCTCTATTAAAATCACCGAGCATCTCGCAGAATCCAGTTAGACTAGTTACTCGAAAGTGGGCCTTGCTGAAGATGCAGTACAATTGCAGAGAGTGCTGCGTATCGCTGGAGAAAATCGATGCTAATCGGCGTAAAAATGCTGATGCTCTTGACGATTCATCAGGCGCAATCGACGTGCAGTTGAGGAACTTGGAGATTGCGCTGAAGAAGCTGGATGTTCCTGACTCGGAAAGTTCCACTTCTAAAGGAAAGAAGGAGATCTACAGATCAAGCATTTGCCGTACGAGATTCACGAAGAGACAGAGGCTAATCAATCACTACCTGTGCTTCCACACAAATCTGATTCAGGACGAGTGCGGAATCTGTCGAATGCGCTGCGGTAATCAGAAGAAACTAAGAAATCATTTGATCCTTCACTGCATAAAGATCCCTAAATCCAAACAGGATCGTTCGCCGATAGATCCGAAGGGTCCATGCGAGAGGtacaagaagaaaaatttctgcaGTGGCTGCAAAAAGAGATTCTGGCTGCTCAGCTGCTTGCGAAAACACGAAGAGTTCTGCAGATTTGTGCGAAAGCCAGAAACTCCACAAGAAGAGAATCCTGATGACGAGCCAAATGTCGAAGATATCGAGTTGCCTGTTCTTGCCATTGGTGGTAATCAGTATTTGGAGACTGATAATGACGTTAGTGATACTACAGAAGTTGCGGTTGCACCAGTTCATCCGGAAGCGCCAATTGTCCCACTCAATGACATCAATGTTCACCAAAAATTGACGTTCGAACCATCGAAGAATCGCTCGTACGAAGTACGGATAATGCGGGGATTGCCAGCACATCTCTGCACTATTTGCAACGCAGCCTTTGGATCAGACAACGCATTCACAGAACATCTAAACAGATACGTCCAACGTAATGCCACACGTTGCATTTACTGTGGCACCCTTTTCCCATCCAGACAACTTCAGTTGAATCACTACAGATCCGCCCATACATTAGAATCAATGAACTTCAAGGTACACTGTTCAGTATGTTACCAAGGTTTTGCTTCCAAAAGATATCTTCGCAGTCACATTCTGCACATTCATTGGGAGCAACAGACGAATGAACACGAAAAAGAATGGCTACCAATTGAACCAAAGTACGAGATGAAGTGTAAAGTATGTAGTTTAGTATTTACAAATCGTAAGAGTTTCATTGAACATGCTATGTATTTCTACGACGATGAACACTACGATTGTAGTCTTTGTGATAAGAGTTTTATCGGTAAATTTCGCTGTCACTCGCACTGGAAATTAGTACACTACACAGAGGAAATAACAAAATCATACACCCATTATTGTAGAGTATGTAGAGAGGGATTTATGTACAAATTTCATCTGTACTCACATCTCGTTCATGTACATCATCTAACTCAAGATGCTATTAAAGATAATCTTAAGGTAAAAACACATTTTGTTTGTGAAGAATGTGAGGAAACATTCTTAACACCTGCACATTTGTCAAAACATCAGGATCTTCACTCGTACAATGGTAATTATGTGTGCAGCAAGTGTACACGCAAGTGTAATTCAATAGAACTGTTAACCAGTCACTACAAAACAAGTCATATgggcaataaaaattatcagaatgcCAAATGTCCAATTTGCGGTGAGGGAATGATGTCAAAAGCATTGTGGATGTCACACATGAAGCATGCACATAAAAATTCAGAGGATCTACCATCGGAGATGTGTTTAGAAAAAGTTTGCACTATCAATGAATTGATTAATGTCAATGTCATTGAAAAACCTGGAAACCCCGTAATTCAAGCCAGTTCAACGTCAAGTACGTCAGATAATGTACCTGCATACGAGGATGACGATGTAATTAGTATAAGTGAAGAGCTGTTAAATATCGAGTATACATGCGCAATATGCGATGAAAAATTCGTCTCAATGCAGTTGCTGAAGGATCACAAGAGTATACACGAGCCATCTAATTACGGCTGTCAGGATAATACGGTAAATGTACAGGAGGATGAACGCTCTAGAGACAGTGTAATCGTATGTGAACCTAATCAATTGCCCAATCTCAAGCCATACAAAAGGATCCCATTGGTCAATGGAGTAGAGAGCCAGCCAATATCACTCGTTGCACCACAGCAGAATCCAGAAAGTTGCGCTATTCTCCCAATAACTTATCATTCTGACAAAGACATCCCATGCAACTTATCAATATCCAGTATTTATTCAGTTGGATTAGAGGAGTACGAGAAAATAGCTAATGATCAAGCAGCCCAGGATAATCAATGGGCAGAAGCAAAAGGTGCTAATGAGAATCCAGAGAATGATCTGCGCTGTGACGTATGCAACGTTGTTTTTACCTGCTCGAAAACCCTGAAAAACCACAAGATAAGATACTCAAATTCAGGTGATTACATATGTGAAATTTGTGGAAGACGATTCAAGTGGATGAAGGCTTATAAGAAACACGTTACAAAACATCGTAGGAAGATTAATGGTACACCTTTGTGGTACTGTGATAAATGTGACGAGGCATTTGcaacgaaaaattcaaagctCATGCACTTTTCACATATTCACAATGAGCATTTGCCAGCAGACGACAGTAGTAATAATCCGAGAGTATCAATTGACAGTACACTTGATTCATCAAATGATTTGAATGTAACATCCTCGTCACAGGATAAATCAACTGATAGAGATGTTTATATTGAGGAAGTTGATTTGACAGAGGATGAATCAGGTGAACCAACTAATACACAAGCTACAAAGACAAATCCAACTAATAGTGTGGCTGTTAAACCTACAATCATTCAACCAAATCGTGTACTATTGAGTAATTATCATTCAATGGATGTTGTGCCAAATTTATGtccaattttttgtaatatctGTCATATACAGTGTAtgagtattgaatttttagttAAACACATTGAAAATGCACATGGTATACGTTTGCCTGGATACAAAGTAAATCGTCAAGTTGAATCGAGTGTTAATTCAACAATGTAcgaacaacaacaacaacagcagcagcagcagcaaaaTTCAACGATACAATCGAGTTATCAAAGTAATCAGGATATGATGAGAAATGCAGCTTATAAAATTGACAGAATTGAAACACAATCGTCGTCAAATTATTACTGCAAAACTTGTAGAGTACCATTTCCTAGTGAATATTCATTGATATCACATCTACATAATGTACATGGTGACAATGAAACTGGTAATTTGATTAGTGAAAATACAACGAGATCCGATGTAcagatgattgaaaaaaaacaaattgatggTACTACAAGAGAAACATCTTTTCTCAATTCAGAGAaacaaaatatgaataaaaattcatcgaaaaatgagAGAGCCATggatttaacgaaaaaaaaagataatattgttttgaaaaaagttcattTGTCTGGTGATTCAACTAATTATCGTATTATTGGCAGTAAAGATACACATGGTAATGTTCAAATAATtagtatcaaaaaaaatgaattacttaatgtaagaaaattacaaaataccAGTGATACTCCGGGAAAAAGTAATTTACGTTGa
- Protein Sequence
- MARANIFKGSSSMVPVENAADERDPLDPGIKNEPTSPTMVHPEETDTPELLSELEAIEANASSQRAMDSHQPMEIDVAETLNTPVTSTSKQQGTDIIDEKKLTRVRRNRRASANDSVTNDQAMARLRCRSSLGVPSLWPVFECDICFRSFNRERDLAKHKTYYKALRCSICEKNFDSARSIMLHRKRVHRNVNWQRYKCKCHFCNLTIGKRTSLQSHIFHFHGNQEEPIKTHRRSRDVKSEMIQGELSGSESARAARKRKRDQLIEDKKEFNNLPSNTSAPSQESSKSDLGARSLEDKSVNRRSQNRDRPLVKIHAIPHEVEALLSDYDESSVKRRKIDRAGDVRVENVRDRRLRSGRLRNESTPGGEENPEINVELPKNEAKEMPQVKKTDPLLKSPSISQNPVRLVTRKWALLKMQYNCRECCVSLEKIDANRRKNADALDDSSGAIDVQLRNLEIALKKLDVPDSESSTSKGKKEIYRSSICRTRFTKRQRLINHYLCFHTNLIQDECGICRMRCGNQKKLRNHLILHCIKIPKSKQDRSPIDPKGPCERYKKKNFCSGCKKRFWLLSCLRKHEEFCRFVRKPETPQEENPDDEPNVEDIELPVLAIGGNQYLETDNDVSDTTEVAVAPVHPEAPIVPLNDINVHQKLTFEPSKNRSYEVRIMRGLPAHLCTICNAAFGSDNAFTEHLNRYVQRNATRCIYCGTLFPSRQLQLNHYRSAHTLESMNFKVHCSVCYQGFASKRYLRSHILHIHWEQQTNEHEKEWLPIEPKYEMKCKVCSLVFTNRKSFIEHAMYFYDDEHYDCSLCDKSFIGKFRCHSHWKLVHYTEEITKSYTHYCRVCREGFMYKFHLYSHLVHVHHLTQDAIKDNLKVKTHFVCEECEETFLTPAHLSKHQDLHSYNGNYVCSKCTRKCNSIELLTSHYKTSHMGNKNYQNAKCPICGEGMMSKALWMSHMKHAHKNSEDLPSEMCLEKVCTINELINVNVIEKPGNPVIQASSTSSTSDNVPAYEDDDVISISEELLNIEYTCAICDEKFVSMQLLKDHKSIHEPSNYGCQDNTVNVQEDERSRDSVIVCEPNQLPNLKPYKRIPLVNGVESQPISLVAPQQNPESCAILPITYHSDKDIPCNLSISSIYSVGLEEYEKIANDQAAQDNQWAEAKGANENPENDLRCDVCNVVFTCSKTLKNHKIRYSNSGDYICEICGRRFKWMKAYKKHVTKHRRKINGTPLWYCDKCDEAFATKNSKLMHFSHIHNEHLPADDSSNNPRVSIDSTLDSSNDLNVTSSSQDKSTDRDVYIEEVDLTEDESGEPTNTQATKTNPTNSVAVKPTIIQPNRVLLSNYHSMDVVPNLCPIFCNICHIQCMSIEFLVKHIENAHGIRLPGYKVNRQVESSVNSTMYEQQQQQQQQQQNSTIQSSYQSNQDMMRNAAYKIDRIETQSSSNYYCKTCRVPFPSEYSLISHLHNVHGDNETGNLISENTTRSDVQMIEKKQIDGTTRETSFLNSEKQNMNKNSSKNERAMDLTKKKDNIVLKKVHLSGDSTNYRIIGSKDTHGNVQIISIKKNELLNVRKLQNTSDTPGKSNLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00046554;
- 90% Identity
- -
- 80% Identity
- -