Basic Information

Insect: Aleiodes leptofemur
Gene Symbol: -
Assembly: GCA_963942555.1
Location: OZ012611.1:3301455-3306423[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.013 2 9.9 0.1 2 23 279 301 279 301 0.94

2 8 1.4e-06 0.0002 22.4 0.7 1 23 319 342 319 342 0.98

3 8 2.5e-05 0.0037 18.5 3.1 1 23 365 387 365 387 0.98

4 8 1.1e-05 0.0016 19.6 2.3 2 23 393 414 392 414 0.96

5 8 0.00014 0.021 16.1 6.4 1 23 420 442 420 442 0.98

6 8 1.5e-05 0.0022 19.1 3.8 1 23 448 470 448 470 0.98

7 8 1.1e-05 0.0016 19.6 2.4 1 23 476 498 476 498 0.97

8 8 0.73 1.1e+02 4.4 1.6 1 20 504 523 504 525 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.013	2	9.9	0.1	2	23	279	301	279	301	0.94
2	8	1.4e-06	0.0002	22.4	0.7	1	23	319	342	319	342	0.98
3	8	2.5e-05	0.0037	18.5	3.1	1	23	365	387	365	387	0.98
4	8	1.1e-05	0.0016	19.6	2.3	2	23	393	414	392	414	0.96
5	8	0.00014	0.021	16.1	6.4	1	23	420	442	420	442	0.98
6	8	1.5e-05	0.0022	19.1	3.8	1	23	448	470	448	470	0.98
7	8	1.1e-05	0.0016	19.6	2.4	1	23	476	498	476	498	0.97
8	8	0.73	1.1e+02	4.4	1.6	1	20	504	523	504	525	0.84

Sequence Information

Coding Sequence: ATGTGCACTCAGCTATTTTCATGTCCCCTATGTGCTCAGCCAAGTTTCGATTCACTGGATTCACTTAGAATTGGTCTAGTGAGTGTAGCTACACGTCCACTAGTCTGTCCAATCTGCAATGACACTCTTCTAGGTATAGACAAGTTAACAATTCATCTATTTGGTCATACAATAGCTGCTATTGACTCGAAAACTCAAGCTTTTGACTCAAAGGACTCAAAAACTCattcaatcaataataataataataataataatggtaataataataatgcatTAAATAAGCCCTTAATTTTACCGCAATGGAGTTCATTCAATGATGTTCATACTGAGGAAAATGAGCAGCTCATTAAAATTAGCGTAATTAACAGGCAAAAAACCGCGGATAAATCCGCGAGTTGCATTTCACTTGGAAATGAACCTTCGACTATATTAAATTTGGAAAGACCTCAAAAAAGTAGTCAAAACGATGGAATAAACGGATCATACATAGCTATGCCCATCAtatttgatggaatttcagaAAACTCAGAAAATGCTGGGGAAAGTGATGCTTGGAAAAACGATTTATCAgcagaaattccaaaaaatagaattggtGCGGATGAATTTAAGGGAGAAATGAGGCTTGAGCTAGTTTCAACTCAGCTGCAGTCATCGGAAAATGCTGTTTCGTCGTCTTCATTGAATCTGCACATTCCAGAAAGTTGTAATAGTGTCTCGCGGTTTTCTAATGATGCATTATGTAATAAAAATGCGAGAAATCAGAAGAATTCAGGGGGTTTGAAAGGATTGAAATGTTTGGATGCTGAAGGAGTAAAGGGGAAAACGGAGAGATGCAATATTTGCGGATTTAATCTTCCTAATAGGGATTTATTGATACTGCACAAACAACTTGTGCATTTGATTGCTGCTAAGGATTTTAATGTTAGACCTGaggatttgttgaaaaattatccGTGTCATTTGTGCACGAAGGTGTTCAAAATGAGGGGGAGTCTGATGGTCCATATGAGGGTTGCACATACTGGTGGTAATTTAGCAAATCTGTCTGGAGACAAGAGTGGAGATAAAAATCCTAAAGAAGGAGGCTTCAACTGTCCATTATGCGGAAAGAACTTTAAAAAAgaACAGCACGTGACTCAGCACCTGAAGACTCACGAGGGCAAACAATGGGAATGTGACGTTTGCACCAAGATGTTTACGACAAAATACTTTTTGAAAAAGCACAAAAGACTTCATTCTGGTGAAATGCCATATAAATGCAGTATTTGTGATAAAACTTTTACATTTCAACAATCATATCACAAACACAGGCTCTATCACAAAGATGATAAACCTCATACATGCACAGTTTGTGGTAAATCTTTCAAAGAATTATCAACATTGCATAATCATGAACGCATTCATACGGGAGAAAAACCCTTTGCATGCGAAACTTGTGGCAAATGCTTTCGACAACGAGTATCCTATCTGGTACATCGAAGGATTCATACAGGCGTTATGCCCTATACTTGTATAGcttgtggaaaaaattttagataCAAAgtCAGCCAGAGAACTCACAAATGTATAGGTCAATTGAACTCGCTGGAATCCCAAATACGATCTGCGAATAATCATTTGGATGATGAGAGAAATTCTGAGAATCGTATCAATCCAATCGTTTCCTCTCCACTCGATCAAGCCAACAAATTCGTGCTAATAGTTGATAACAATGGAAAAACCACATTAACTCGAGAGATTGACATGAATATTGCTGATTCTGTAAACGAAAAGACAGGGATAATGCCAACAACTGACGAAAAATCATTACCAGAATGTGAATCAATTGTAAATCTTCGAGATAATAAttctcaggattttttttcattagttatgTCACCTCTGCAGAATGAATTATCATCTCCATCTGCAGAAATGCAACATTTGACACTttcatccccaaaaaataGCGAAAATTATACcgaatccattgaaaaattccaagatcCTACCGACAATCTTCAAAAAGATCTAAAACATGCTATTGATGATATTTTGAGCGAGAGAAATCGCGAAAATACTTCTTTGGAGACTATAAACGAAGAATCACTGAAAGAATTACTTTatggaattaataaaaatctttgA
Protein Sequence: MCTQLFSCPLCAQPSFDSLDSLRIGLVSVATRPLVCPICNDTLLGIDKLTIHLFGHTIAAIDSKTQAFDSKDSKTHSINNNNNNNNGNNNNALNKPLILPQWSSFNDVHTEENEQLIKISVINRQKTADKSASCISLGNEPSTILNLERPQKSSQNDGINGSYIAMPIIFDGISENSENAGESDAWKNDLSAEIPKNRIGADEFKGEMRLELVSTQLQSSENAVSSSSLNLHIPESCNSVSRFSNDALCNKNARNQKNSGGLKGLKCLDAEGVKGKTERCNICGFNLPNRDLLILHKQLVHLIAAKDFNVRPEDLLKNYPCHLCTKVFKMRGSLMVHMRVAHTGGNLANLSGDKSGDKNPKEGGFNCPLCGKNFKKEQHVTQHLKTHEGKQWECDVCTKMFTTKYFLKKHKRLHSGEMPYKCSICDKTFTFQQSYHKHRLYHKDDKPHTCTVCGKSFKELSTLHNHERIHTGEKPFACETCGKCFRQRVSYLVHRRIHTGVMPYTCIACGKNFRYKVSQRTHKCIGQLNSLESQIRSANNHLDDERNSENRINPIVSSPLDQANKFVLIVDNNGKTTLTREIDMNIADSVNEKTGIMPTTDEKSLPECESIVNLRDNNSQDFFSLVMSPLQNELSSPSAEMQHLTLSSPKNSENYTESIEKFQDPTDNLQKDLKHAIDDILSERNRENTSLETINEESLKELLYGINKNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00046493;
90% Identity: iTF_00046493;
80% Identity: -