Basic Information

Insect: Aleiodes leptofemur
Gene Symbol: ZNF236
Assembly: GCA_963942555.1
Location: OZ012610.1:22951180-22962807[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00018 0.026 15.8 2.7 2 23 147 168 146 168 0.96

2 17 1.7e-05 0.0025 19.0 0.5 1 23 174 196 174 196 0.98

3 17 1.9e-06 0.00028 22.0 0.3 2 23 202 223 202 223 0.98

4 17 0.0039 0.58 11.5 0.2 3 23 231 251 229 251 0.96

5 17 3.8e-05 0.0057 17.9 1.0 2 23 262 283 262 283 0.98

6 17 2.9e-07 4.3e-05 24.5 1.1 1 23 304 326 304 326 0.99

7 17 9.7e-06 0.0014 19.7 1.9 1 20 332 351 332 354 0.96

8 17 1.2e-05 0.0018 19.5 0.2 1 23 360 383 360 383 0.96

9 17 0.001 0.15 13.4 2.2 1 23 392 415 392 415 0.97

10 17 1.1e-06 0.00016 22.8 1.9 1 23 525 547 525 547 0.98

11 17 3.4e-05 0.0051 18.0 4.3 1 23 553 575 553 575 0.99

12 17 0.00012 0.017 16.3 3.1 1 23 581 603 581 603 0.99

13 17 6.7e-06 0.001 20.2 3.0 1 23 607 629 607 629 0.98

14 17 0.00018 0.027 15.7 3.6 1 23 685 707 685 707 0.98

15 17 1.2e-06 0.00019 22.6 2.9 1 23 713 735 713 735 0.99

16 17 2.6e-05 0.0039 18.4 1.4 1 23 741 763 741 763 0.98

17 17 5.6e-05 0.0083 17.4 7.2 1 23 769 791 769 791 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00018	0.026	15.8	2.7	2	23	147	168	146	168	0.96
2	17	1.7e-05	0.0025	19.0	0.5	1	23	174	196	174	196	0.98
3	17	1.9e-06	0.00028	22.0	0.3	2	23	202	223	202	223	0.98
4	17	0.0039	0.58	11.5	0.2	3	23	231	251	229	251	0.96
5	17	3.8e-05	0.0057	17.9	1.0	2	23	262	283	262	283	0.98
6	17	2.9e-07	4.3e-05	24.5	1.1	1	23	304	326	304	326	0.99
7	17	9.7e-06	0.0014	19.7	1.9	1	20	332	351	332	354	0.96
8	17	1.2e-05	0.0018	19.5	0.2	1	23	360	383	360	383	0.96
9	17	0.001	0.15	13.4	2.2	1	23	392	415	392	415	0.97
10	17	1.1e-06	0.00016	22.8	1.9	1	23	525	547	525	547	0.98
11	17	3.4e-05	0.0051	18.0	4.3	1	23	553	575	553	575	0.99
12	17	0.00012	0.017	16.3	3.1	1	23	581	603	581	603	0.99
13	17	6.7e-06	0.001	20.2	3.0	1	23	607	629	607	629	0.98
14	17	0.00018	0.027	15.7	3.6	1	23	685	707	685	707	0.98
15	17	1.2e-06	0.00019	22.6	2.9	1	23	713	735	713	735	0.99
16	17	2.6e-05	0.0039	18.4	1.4	1	23	741	763	741	763	0.98
17	17	5.6e-05	0.0083	17.4	7.2	1	23	769	791	769	791	0.98

Sequence Information

Coding Sequence: ATGTCTCTTGCAGTTGATACAATATCACTTGGATTTGTAATTTCCGAGGATGGTCGTGCTCTTCTAGTTGCAGgGAATGATGAGGGCAGCCTGGAGCTCATTCCTGCTCCAATATCAATAATCCAACAGAATGGTGCAATTTTATCACCAtctataaaattgaataatggtaattccaataattctcaagtgtttcaaattaatttggaaaatctAGTTGGTGTTTCGAGTATTCAACAGACAACATTCCTATCAGAGAATGAAGACAACGCAGTTACTAATgatgagaataataaaaataaggaGAAAATTTGTGAGAATGGTTCAAGTGAATCGAGTTGTTTAAGTAATAATGCTACTAATGTACCtgaaaagacgaaaaaaggTCCTGGAAGACCGAGAAAAAATCCAACTACCTCAGCAAATAATAAAGAACTGAAATGCGAAATTTGTGGAgaacaattcaaaaaacagaTGCTATTCCGTAAACACATGGATCATCATGCAGAAGAGAAGCCCCATCGTTGTCCAAAGTGCCCAGCATCATTTAATATACCATCGAATTTTACGCTTCACATGGCAACGCATAATACAGGGGAGCCAAAGTGTCCAGAGTGTGGTAGAAAATTCGCGAGAATGGCTAGTTTAAAGTCACACATGTTGGTGCatgaaaaagaggagaatctATTCTGTACTGAGTGTGAGGATGCATTTTCAACAAAGGCACAACTCGATGCACATTTGAAGCTACACAATGAAAAATGGTCATCAGAAGACGTAAGAAAGTGCAAACTCTGCAACAAACAATTCACTCAGCCTGCTCTTTATCGTCTTCATATCCGAGAGCACTACAGAcTACAGACGAAGATAATGAAACAAACGAAGCGCGGTACAACGCAGAAGACAATTTACAAGTGTAGAATATGTACGAAGGTCTTTCAGAAACCGTCACAGTTGATGAGACATATACGTGTACATACGGGAGAGAAACCGTTTAAGTGTAATGTCTGCACCCGAGCATTTTCCCAGAAGAGTTCCCTCCAGATTCACATGTGGCATCACGTTGGCGTCCGACCATTTCCCTGCGAGCAGTGTAACgcaaaattctctcaaaaaggCAATTTAAATGCCCACGTCCTCCGTGTCCACAATGCACCAGAGGGTGAACCAATTTATGCATGCAGTCAGTGCAGTTGTGTCTTCAAAAAACTCGGTAGCCTAAACGgacacatgaaaaaaatgcatgcaGTACCAGCAGAAGAGCCAATGAAGTGCGACTCAACCCAAGAAAACGACATACAAACCGTAAAAAATGTCATATCACAACTAGTCTCTCTCGACTCCAGTATTAAATCCCATCCAGATTCAACCGACAAGAACAACGAGAAGAGTGATATTCTCCAACAAGCATTAACAAACAGTGGATTAAATGAAAGAGacaaaatcagtgaaaattcaacgaaaaaatctgacgCACAAACATCCTATGTAACACTTGTTGACAGAACACCAGACGGTTCATTACGAAAATACGTTACAATCAAACAGCGAAGAATTGGTGCAATAAGATGGTATGCCTGTTCATTTTGTCACAAAGAATTCAAGAAACCATCTGATTTAATCCGTCATCTACGTGTTCATACACAAGAAAAGCCATTCAAGTGCTCCTACTGTCATCGTTCATTTGCCCTAAAATCAACGATGAAAGCACACGAGAGAACACACTTTGGTACGAAGAAATATTCTTGTGGAGTTTGTGGAAAAATGTTTGCTTGTCACAGTAGTTTGACAGCACATACAAGAACTCATACGAAACCACACAAGTGCAGTATCTGCGATATGTCGTTTAGTACAAGTACTGTTTTGAAGAGCCACATGAAGAGTCACACAAAGCCAAAGTCGAAATTATCACCAGAAGCAGAGAAATTAGTGCCGCAGATTGTTTTGGAGGAGCCGCTTGTTATTAGTGATGCAGGCAACAAAATAAGCGTTGCTCAGGTGCAATCGAAGCAACGGCACGTTTATAATACAGACGATGATGGCAATAGGCCACACAAGTGCTGGGTTTGTCCTGCGgcattcagaaaaattagcCATTTGAAGCAACACTATCGCAGACACACTGGCGAAAGGCCCTACAAGTGTCCAAAGTGCGATCGTAGATTCACTTCAAACAGTGTATTAAAAGCACATTTACATACTCATGAAGAGTCAAGGCCATTCAGTTGTAATGTTTGTAATGCAACATTCTCAACTCAGAGCAGTCAGAAGAGACATTTAGTCACACACAGCAATAAAAGACCATTTATGTGTCCCTATTGTCATAAAACCTTTAAAACATCTGTTAATTGTAGAAAACACatgaaaatacataaaaatgaattggcACAACAGCAACTTGAGAAACAAAAGACTTGTCAGGATAATGGTGGTACATTGGTGGAGAATCAGAAGGATATTAGGAGTCATATTTTaacgggaaatttgaatttaggaGAGGAAATTGGAgttgattttcagggaaataTGAGTGAAGATTTTGCACAAGTATTTACGGAACAATTGCAGGCAATTGGGGATAAAGAGAAGGGATTTTTGAATGATGGCAATGGAAATGAGACTATTAATCAAAATTTGCCAGTAGAATCCGGAAACTTGGTGCCCTCACAGACTCTTCATGCAGACGAAACTGGTACAATAACTCTACCAAATTACACTGGAGAACAAACGTTAACAGCAGAAAGTATACGTGAAATTGAGGAGACTCTGAATCAGCAATTATTCAATATAGGCCTCGGTAATCTTGGTTTAACAAACAATTTAACCCGCCAAATTAATGAAGCTGCAGAAAGTATCGAATCCCGTGAACAGCCAGCATTGAACATAATTTATGATAATCAAAAAGTCCTGGATACAACAGTTCAACCATCGATGAACTCAAGTCTATTTGGTTCATCCCATTTTGATACATTTGACATGAGCCAAATAACACTGCAGGcaagttaa
Protein Sequence: MSLAVDTISLGFVISEDGRALLVAGNDEGSLELIPAPISIIQQNGAILSPSIKLNNGNSNNSQVFQINLENLVGVSSIQQTTFLSENEDNAVTNDENNKNKEKICENGSSESSCLSNNATNVPEKTKKGPGRPRKNPTTSANNKELKCEICGEQFKKQMLFRKHMDHHAEEKPHRCPKCPASFNIPSNFTLHMATHNTGEPKCPECGRKFARMASLKSHMLVHEKEENLFCTECEDAFSTKAQLDAHLKLHNEKWSSEDVRKCKLCNKQFTQPALYRLHIREHYRLQTKIMKQTKRGTTQKTIYKCRICTKVFQKPSQLMRHIRVHTGEKPFKCNVCTRAFSQKSSLQIHMWHHVGVRPFPCEQCNAKFSQKGNLNAHVLRVHNAPEGEPIYACSQCSCVFKKLGSLNGHMKKMHAVPAEEPMKCDSTQENDIQTVKNVISQLVSLDSSIKSHPDSTDKNNEKSDILQQALTNSGLNERDKISENSTKKSDAQTSYVTLVDRTPDGSLRKYVTIKQRRIGAIRWYACSFCHKEFKKPSDLIRHLRVHTQEKPFKCSYCHRSFALKSTMKAHERTHFGTKKYSCGVCGKMFACHSSLTAHTRTHTKPHKCSICDMSFSTSTVLKSHMKSHTKPKSKLSPEAEKLVPQIVLEEPLVISDAGNKISVAQVQSKQRHVYNTDDDGNRPHKCWVCPAAFRKISHLKQHYRRHTGERPYKCPKCDRRFTSNSVLKAHLHTHEESRPFSCNVCNATFSTQSSQKRHLVTHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKNELAQQQLEKQKTCQDNGGTLVENQKDIRSHILTGNLNLGEEIGVDFQGNMSEDFAQVFTEQLQAIGDKEKGFLNDGNGNETINQNLPVESGNLVPSQTLHADETGTITLPNYTGEQTLTAESIREIEETLNQQLFNIGLGNLGLTNNLTRQINEAAESIESREQPALNIIYDNQKVLDTTVQPSMNSSLFGSSHFDTFDMSQITLQAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -