Alep026559.1
Basic Information
- Insect
- Aleiodes leptofemur
- Gene Symbol
- -
- Assembly
- GCA_963942555.1
- Location
- OZ012622.1:5253097-5253444[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-08 5e-05 23.8 0.0 7 43 25 61 21 63 0.89 2 2 0.079 89 3.7 0.0 2 16 95 109 94 113 0.81
Sequence Information
- Coding Sequence
- ATGCCACCAGAATCGAAGGCAGAGCAAAACACTTCTCGTCAACGTTTCAAGTATTCACCAAGAGATACGGAACAAGCTCTGGATGCTATGAGGAATGGTGAATTGAAAGCTAGCCAAGCTACTGAAATTTACCATATACCTAAATCCACGTTGAGCAATAAactaaatggaaaatttccagagAAACGAAAGATGGGCTCCAAGTCGATATTGTCTGATGAAGAGGATGCATTTCTTGAACGTTGGATCTTGGGAAAGGCAGCAGAGGGATTCCCTATGTACCCCGATGAAGTAAAAAATGCAGTGCAACATGTATTAAAAGGAGCATCCTCGAGACAATCCCCTTGA
- Protein Sequence
- MPPESKAEQNTSRQRFKYSPRDTEQALDAMRNGELKASQATEIYHIPKSTLSNKLNGKFPEKRKMGSKSILSDEEDAFLERWILGKAAEGFPMYPDEVKNAVQHVLKGASSRQSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -