Alep000076.1
Basic Information
- Insect
- Aleiodes leptofemur
- Gene Symbol
- -
- Assembly
- GCA_963942555.1
- Location
- OZ012609.1:472938-474844[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-11 3e-08 34.1 0.0 1 41 106 146 106 149 0.88
Sequence Information
- Coding Sequence
- ATGTACTCTTGGGCCTCAAACCTGAGGAAACATCTCAAGACGGGCTGTGGTTTGGCAGCATCTGAAGCCAACTGGACAATGATGGTACCATCCTCAGGACAAACACTTATGATTAACAACCTGTGGGCCGATGTGACTTGTCCAATATGCAGCAAAACATTTCCATCATACGATAATCTGGCAGCACACAGAAGAAGATACTGCGGTGTTGCAGCTAATATACAGTGTGCTTATTGTGATCGTCGTACAAAACGCGTTTGGGACATGAAAGTACACATTGCTGgtAGACGACGAGGAAAGTATAACAGATTTTATACTGACGACAGCCTCACTCGAGCTATGGAAGCTGTCGCTCAAGGTATGTCTTTAAGAGCTGCTGAAGGTCTATTCAAGATACCAAGGACTACACTCCAAAGATATATTAAGCAAGaAACAAATCAACATGGTTACGTTAACTGCCAGAAAGTCACTTATTCCtgtaaaaattgtggaaaaatctacaattattattcaagtttgGCGAGACATCTCAAGCACGAGTGTGGTGTTGAACCAAAATTCCAGTGTCCACTGTGTCCATACAGAACTAAACATAAATCAAGTTTAAATACACATCTAAATGGAAGAcatatgaaattaatgaatgattATTACGTTACACCAAATTATCATGAGAATGAAGCAAAGTCCTCGAATTGA
- Protein Sequence
- MYSWASNLRKHLKTGCGLAASEANWTMMVPSSGQTLMINNLWADVTCPICSKTFPSYDNLAAHRRRYCGVAANIQCAYCDRRTKRVWDMKVHIAGRRRGKYNRFYTDDSLTRAMEAVAQGMSLRAAEGLFKIPRTTLQRYIKQETNQHGYVNCQKVTYSCKNCGKIYNYYSSLARHLKHECGVEPKFQCPLCPYRTKHKSSLNTHLNGRHMKLMNDYYVTPNYHENEAKSSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00046503;
- 90% Identity
- iTF_00047535;
- 80% Identity
- iTF_00047535;