Alep014621.1
Basic Information
- Insect
- Aleiodes leptofemur
- Gene Symbol
- -
- Assembly
- GCA_963942555.1
- Location
- OZ012615.1:7036041-7039253[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8e-10 9.1e-07 29.3 0.0 1 38 43 79 43 83 0.93 2 2 2.5e-10 2.8e-07 31.0 0.0 1 36 109 144 109 146 0.95
Sequence Information
- Coding Sequence
- ATGTATGCCCAAGTGTTTTTCTTAACAATTTATTACAATATATCTGAACAGGACTTGCGGAAGGTCAGTTATAGTTCAGCAGCAAAGACGGATAAAACAAATGAGAACGGTCGTTATGCTTCCTACTCGGAGGAGAGCCTGAGCGCAGCCCTCTCCGCAATAAAGCGCGGTGTCCCAGTGACGAAAGCAGCTCATGACTACGGAATCCCTCGTTCGACCCTTTCCTaccaaaagaaaataatgctGAAGCCAAAGGTGCTAAGAAAGAGGCCTATTATCCTAGGCCCAGACGGAAAGCCAAAGAAGCAGAGTTATGCAGCCTACACGGAGGAATCTCTTCAAGCAGCACTGACCGCAGTGCGTAATGGAGCGAAAGTCCGACGAGCCTCCGAAGACTACGGAATTCCGAAGACAACACTGCTCTCGAAGCACACGGGGGTCCTAAAGCCAACAATCTGCAAGCGCGGACCAGACACGATTCTCGGCCAGGACAACGAAAAGACACTTGCCAAGTGGGTGCAGAACAGAGTTGCTCACAAGCTTCCAATAACGCGAGATCAATTGCTGGAAAGCATTCGCATATTCTTAGATAGAATCGACAAGAAGACGATATTCCGAAACAATCGTCCGGGTCGACACTGGATCGACGCGTTCAGGGATCGGCACAATTTGATAGACCAGATCACTCCAACTCCAACAAACGCCAAGACTCGAGGGATCAAACTAAAGCGCTGGTTCAGAGAGgtaaaggcgtatctccaaggGCAAGGATTGCTAGATGTTGATGGTTCCCGCGTCTTCCACTGCCATGAGCTTGCACTTCTGCTGAACCCTGAGACCAAAAAGTCGATAATACGTCCAGGAGACAGGACGCCGCATAATTTTAGCAGCGGCGATCCACATCAGTGCATCAGCACGATGATCTGCGGAAATGCGGTTGGGGATCTGTCACCGCCTCTCACGATCTTCAAGTGTTCGCGTGTTGCTGCGAATATTACAGCTGCACTGCCAAACAGTTGGGCAGTCGGAAGGAGCGAGGATGGATGGGTAGATGGAGAGTCCTTCTACGACTGGATGAAGACCGTTTTCCATCCTTGGTTGGTCAGGAAGAATATTCAACTGCCGATCGTCTTGTATCTTGATGGCTACAAGACCAACTTTTCGCTTGAGTTGAGTCAGTTTTGCAGTGGAATGGGGGTGGTTCTGGTCTCGATGCCGATGAATGTCAGCGAAGCAATACAGCCGATGGATGCGGGGCTCTTTCAGGAGGTAGAGAAGATCTGGTTCAAGGCAGTTTCTGCGTGGAGAAAGAGGAACGGTGGAGGCAGGATGAAGGGCGAGGACTTTTGCCCATTACTGGATGAAGTTATCGGGAAACTTGACGTGAAGGAGATTTTGGGGGGTGCGTTTGAGAGGGTCGGGTTCTGGCCCTTCTCCATTGATGCACTCAGCCAGATTGATTACTACAAGGACAATTCGGAGGATGCTCTTCTTGTTCCGGTTGATCCTGAGATCCTTCGGAGTGCCGATGAGGTCAATGACTTTTTGAGCGTCGTGGAGTTCAATATCGGTGATGAGATTATGAAGATCTTTGAGAAGATTGGGGTGGAGGGCGAGTGGAGGGGACCAGCTGAACATGAGAAACTTTTTTATCTGTGGCAAAAGATCAAGAGCAATGGGACTATTGATAATTTGATGAGGACTTGA
- Protein Sequence
- MYAQVFFLTIYYNISEQDLRKVSYSSAAKTDKTNENGRYASYSEESLSAALSAIKRGVPVTKAAHDYGIPRSTLSYQKKIMLKPKVLRKRPIILGPDGKPKKQSYAAYTEESLQAALTAVRNGAKVRRASEDYGIPKTTLLSKHTGVLKPTICKRGPDTILGQDNEKTLAKWVQNRVAHKLPITRDQLLESIRIFLDRIDKKTIFRNNRPGRHWIDAFRDRHNLIDQITPTPTNAKTRGIKLKRWFREVKAYLQGQGLLDVDGSRVFHCHELALLLNPETKKSIIRPGDRTPHNFSSGDPHQCISTMICGNAVGDLSPPLTIFKCSRVAANITAALPNSWAVGRSEDGWVDGESFYDWMKTVFHPWLVRKNIQLPIVLYLDGYKTNFSLELSQFCSGMGVVLVSMPMNVSEAIQPMDAGLFQEVEKIWFKAVSAWRKRNGGGRMKGEDFCPLLDEVIGKLDVKEILGGAFERVGFWPFSIDALSQIDYYKDNSEDALLVPVDPEILRSADEVNDFLSVVEFNIGDEIMKIFEKIGVEGEWRGPAEHEKLFYLWQKIKSNGTIDNLMRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00046064;
- 90% Identity
- iTF_00046064;
- 80% Identity
- -