Alep009200.1
Basic Information
- Insect
- Aleiodes leptofemur
- Gene Symbol
- bab1_1
- Assembly
- GCA_963942555.1
- Location
- OZ012612.1:16855452-16859385[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.00012 0.14 12.7 0.0 2 38 193 229 192 235 0.84 2 4 5.9e-12 6.6e-09 36.2 0.0 2 38 243 278 242 284 0.87 3 4 0.0048 5.4 7.6 0.0 8 33 301 325 298 330 0.72 4 4 7e-11 7.9e-08 32.7 0.1 4 36 357 390 354 396 0.89
Sequence Information
- Coding Sequence
- ATGTCTGAAGAAACGAGTCAATCTCAAATACAACAAAGTTATTGTTTCAAATGGAGTGATTATCATAATCATTTGTCAACAGTTGTCAAACAATTGTTGGATGAGGATTGTATGGTTGATGTTACACTTTCAGTTGGAGGTGAACGTATTCGTGCACATAGAATGGTACTATGTGCTTGTAGTACGTTATTTCAAgaaattctgAGTGAAACAAAAGAGGATCATCCAACAATAATAATCAGTGACATATCACCGCAGGATGTCAGATCAATTGTGCAATTTTCGTACCAAGGAGAGGTACGAATCCCCGTTGAAAACATATCTAATTTATTGGATGCAGCACAATTATTGAGAATAAGTGGATTAATGGAGATCGAGGGACTCGACGAGAACGACACAATCATCAGCAAGGAATTGACTGAGGAAATTGACGAAGAATTAGATGAAACTGGAGATAAAGACGTGCTCGAACCGATCGAAGGAGATGAAGTATGTATTTCGGAAGTGAACGACGACAATTCTAACgaggtgaaaaagaaaaaaaagaagagagatcACGTTAAAAGAGATTACAACGATGACATGTTGGAACGGGCTATAAATGACTTGAAAAATGGTAAAACACTTGTTGAAGCCTCTACAAAGAATCATATTCCACGTTCCACGCTTTATATGAGAGCAAAGACACTTGGGATACAGTTGAATGCATCGAGGAGTGAATATCCTCCGGAGTGTATGAAAGCTGCTATCAACACTGTGCTCAATGGTTCGAGTCTTCAACATGCTTCTGAAATGTACGGAATACCGAAAACAGTTCTCTGGAGGAGAATGCAGAAGGAGGGCTATCAGATTATCAGATCAGAGGCAAAGAGATCATATGGCTCTGAGCGAAGAGAGGCTGCTATAAAAGCACTTGCGAGAGGGGAAAATCTTACGACAGTTGCACATGAATATAACaTACCAAAAACAACGCTATTCAGAGACAAAACAAAGCTTGTAGGCGAGGGTAAATTGCCGGAGTCATTTtggaaaaaacgaaaaggcGATGacgaagaattgaagaaatcacGACTTGAAGAAGCTGTTGCGGCTTGTAAAGATGGGAAAATGTCACAGGCAGCAGCTGCAATAGCTTATCGTATTCCAAAAACTACAATCTGGCGTAAATTACAtcaagaaaatggaaaaattgataattctggACACAGTAATAAAAAACAGAAAGtggataatgaaaaaaatagagacaaATCGGAAAGTGGTGATGCGTTTGCTTTGTGTGAaGTTTCATCAGAGATTCCAATCACCTACATCGACGAAAACAGTATTCCCCAAGACTCCGTGATAATTCTAACGACCGAAGACGTCGACGACCTCAACCTAGAGGACGAGCGCCAAATAATAGTCACAACAGACTCGACTCAAGAATATGTTCCCTGCGCTATGAGCATCGACGAGGACTCGAATTATACATCAGCAGAAACATAA
- Protein Sequence
- MSEETSQSQIQQSYCFKWSDYHNHLSTVVKQLLDEDCMVDVTLSVGGERIRAHRMVLCACSTLFQEILSETKEDHPTIIISDISPQDVRSIVQFSYQGEVRIPVENISNLLDAAQLLRISGLMEIEGLDENDTIISKELTEEIDEELDETGDKDVLEPIEGDEVCISEVNDDNSNEVKKKKKKRDHVKRDYNDDMLERAINDLKNGKTLVEASTKNHIPRSTLYMRAKTLGIQLNASRSEYPPECMKAAINTVLNGSSLQHASEMYGIPKTVLWRRMQKEGYQIIRSEAKRSYGSERREAAIKALARGENLTTVAHEYNIPKTTLFRDKTKLVGEGKLPESFWKKRKGDDEELKKSRLEEAVAACKDGKMSQAAAAIAYRIPKTTIWRKLHQENGKIDNSGHSNKKQKVDNEKNRDKSESGDAFALCEVSSEIPITYIDENSIPQDSVIILTTEDVDDLNLEDERQIIVTTDSTQEYVPCAMSIDEDSNYTSAET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00048077;
- 90% Identity
- iTF_00048077;
- 80% Identity
- iTF_00047246;