Basic Information

Gene Symbol
ct
Assembly
GCA_963942555.1
Location
OZ012612.1:14669132-14687224[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.4e-27 9.3e-24 84.1 0.0 2 72 471 542 470 547 0.95
2 3 3e-32 2e-28 99.0 0.0 3 77 882 957 880 959 0.96
3 3 3.4e-30 2.3e-26 92.5 0.0 3 75 1110 1183 1108 1187 0.95

Sequence Information

Coding Sequence
ATGGTGAAAAAATTGCTGATTAATCAACTCGTCGATGAGGTATCGAGGTTACAGCAGACACTCCAAAGACTTCAGGAGACAAGTGCCCAAGCAACAGCAAGACTAGAGGAGGAACTTGACAATAGAAGACAGCATATAGCAAGATTGGAGAGTAAATTGGACAGACAGAGAgattatgatgaaattaaaagGGAAATAAGTGTATTGAGATCAGTTGATTTGTCACAAATACCAACTGGTGAACCTGGAAAAAGTCTTGAGCATTTATTGATGGAAAGAACAAAGGCATTACAACAGGCAGAAACATTAAAACCACCAAGTACACCAGATGCAATTGGTGGACTAGCCTCACCAATGCAGCGTGCTGCAACTGCCTCTCCCTCTCATGGCAGTGGTGTTATTGGTGTTGGCACCGGGATAACACCGGTTACCACTCTCGTATCCACCCAACAGGTGCTCCAAAAACGCTCCACCCCAACACCCACAGTCGGTCAAACGGCTGTAGCAGCCTCAAGTATCCTATTTCCGCCTCCTCTTcaaaatgttgaaacatttGGCTCATTTCTTGGCGAAGAGATTGTCGCCAATTGGAGGCGATCCCTGGAGCGTTCAATAATGAGCCAACAACAAgcacaacaacaacaacaacaacaacaacagccaAATCAACAACAAACATCACAGTCAGGTGTTCTCCAATCTCAACCGACAACTGCCCAAATAACCCAGATGTCCCAATCGCCATTACAAATTGGTGTCCATCAAAATACAACACTGTATTCACAACCAACGACACCAAACCTAAATCACCTTCAATCACCAACAGATTCAGCATCAACATCcaccaacaacaacaacaatacAACAACTCCAACACCGATAAGTGGACCAGCAAAATCGGTTACACCATTAACAACAAGCCTGGATACCTCAGCTGAGAAGGCACCAACGCCTGTTCCTGGTCACGTGACACCAGTACCACCGACACCAGTTCCACCAACATTAACACCATTAACAGCATCAGCATTGACATCACCACCAGCTAGTCTTCAGCTGCCATCAAGTATGATAGAAGCTGCTATGAATGGTGCAAGTCTGCCTGGATTATCGATGTCCCAGTCTCAGCCACCAAAGAGCCCCCACGATGAATCCTGCCACAATAAcaacaacaataataataacagtCATCATCTAGCTAATAACAACAACAATAGTATTGGAAGTTTGAGTGTATTAGACAGCTTGAAGAGTCCTTTCCGTTTCGACGACAGAACACATCCATTCCGTTTTGGTGATGAATTCGGTGCTGCTAGTATGGCAGGAAGACTTGGCGAATCATTAATACCTAAGGGTGATCCAATGGAGGCAAGATTACAAGAAATGCTGCGTTACAATATGGACAAATACGCTTCACAGAATCTTGATACACTACATATAGCAAGACGCGTACGTGAATTACTGTCAATACACAATATTGGACAACGTTTATTTGCCAAATATGTTCTTGGATTGAGTCAAGGTACTGTCAGTGAATTACTCAGTAAACCAAAGCCATGGGACAAATTAACGGAAAAAGGACGTGATAGCTACAGAAAGATGCATGGTTGGGCCTGTGACGAGAATGCTGTACTATTGCTGAAATCTCTAATACCGAAGAAAGAGTATGTTTCAGGAAAGGAGCAGGGTATGCCAACGTTTGGACGTCCACAGGATGGTGGACCACCGGACATCAATGACGAGAGAATTGCCCACATGCTGTCGGAATCTGGTCACTTGCAGATGAGCCGAAGCGAACACGATACGTCGAATGATGCCGATAGCAAAAGCCCAAGCAGACTCGGTTGTCCAAGTCCGTTTGGCAAAGACAGATACGACAGTCAAAATAGAAgacttaaaaaatatgaaaacgaTGACATTCCCCAGGAGAAGGTTGtgagaatttatcaggagGAACTTGCTAAATTAATGGGCAGAAGAAGCGATGATTTGCGTGGACCAAGAGACTTTCCTCCGAGCGCGAtgtttcctcattttttcagtgGAGCCCAAGGAATCCCCGGAATGGAGCGTACCCAAGAAGAGATAAGACTAGCATTAGACGCATACCACCGTGAgctccaaaaattaaatacagCACCAGGTCAAAATCCAGCTCTGGCAACTCTCTCCGGTCTCCCAAGTCTCCCCGGACTTCTAGCACTTCATCAGCAAGCATTGCAGCAAAATCACATGGCAGCAAATGGTGGTACTGGTGTTGGTGTCCAAGACTTGAGTCTCGGCAAAGTTGATCCACGCACTAAAATAATGAACGGTGTAACGGAagaggaaaaggaaaaaatggaagaagCCATGAGACATGCAGGTAGTGCATTTTCTCTTGTACGACCAAAACAAGAGCCATCAGCACAATCAACACCAGGTGGTTCAAGTGCAAGTTCACCACTTGGTAATTCAATATTGCCACCAGCAATGACACCAAGTGATGAATTTACTGGTGCTGCTGCAGCAAGTCCATTGCAAAGAATGGCATCAATAACAAATAGTTTGATAAGCCAGCCATCAACACCAACCCATCATTCAGCAAATCAACGTCCATTGAAAGCTGTATTACCTCCAATAACCCAGCAACAATTTGATCTTTATAATAATCTCAACACTGAAGATATTGTGAAGAGGGTGAAAGAACAATTGTCGCAGTACTCGATATCCCAGAGATTATTTGGTGAATCTGTACTTGGTTTGTCGCAAGGCTCAGTGTCTGATTTATTGGCACGTCCTAAGCCATGGCACATGTTGACGCAGAAAGGACGTGAACCATTTataagaatgaaaatgtttcTTGAGGATGAACAGGCTGTACACAAATTAGTTGCTAGCCAATACAAAATAGCAccggaaaaattaatgaggacCGGTGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCCTGTGGAACCCCGATGAAGCCGATGCCACCTACGAAACTCGTCCAAGAGCAGCTCCAAAATGCGGCAAAAGCGCAGGCAGCAGCACAAGCAGCAGCCCAAGCAGCGGCCCAACACCAAGAAAGTCAGCTTCAACTAGGACCCCCTCAACCAGGTTCACAACACGGTCCCCACCCCCAACCGCCCCCAATGATGCTAACACCCCCTGGTCCCCACCACGTAGCGAGTCACGCTGCCCAAATATCCATCCAggagctccaaaaaaagcaGCATCAACAGCAACAAATGGGCCTCCACTCGCCCCACCAAATGACCTCCCCCCTCCGTAATCTCCATGCTCACATATCCCCAAGTGTCTACGAAATGGCTGCCCTAACACAAGACCTCGACACCCAAACAATAACCACAAAAATCAAAGAAGCCCTTCTCGCAAACAACATAGGTCAAAAGATTTTCGGCGAGGCAGTTCTCGGCTTGTCCCAAGGTTCAGTAAGTGAGCTTCTGAGCAAGCCAAAACCCTGGCACATGCTCAGCATAAAAGGAAGAGAGCCCTTCATAAGAATGCAACTGTGGCTAGCCGATACCCACAATGTCGACAGACTTCAGGCCCTAAAAAACGAGAGGCGCGAGGCAAATAAAAGACGCAGAAGCAGTGGTCCAGGTCACGACAACAGTTCCGACACATCAAGCAACGATACAGCTGATTTTTACCATGCATCAGGTTCCCCCGGTCCAGGTCCACCATCAGCAAAAAAGCAGCGTGTTCTATTTTCCGAGGAACAAAAAGAAGCCCTAAGATTAGCATTTGCCCTTGATCCATATCCAAATGTAgcaacaattgaatttttagccGGTGAATTAGCTCTATCATCACGTACAATAACAAACTGGTTTCACAATCATCGAATGAGATTGAAACAACAAACACCACATGGACAACCAGAGCCACAATCACCACGTGAACCTGGACAGCCATTTGATCCAGTACAATTTAGATTATTGTTAAACCAAAGACTGCTTGAAATACAAAAAGAAAGACTAGGTTTGGGCAATGTACCAATACCATATTCCCCTTATTTTAATCCAAATTTGGCAACATTAATGAGTAATGCACTTAAAGAGCAGTGTTCAGGTTTGGATTTATCTATGGGTTCATTGAAACGTGAGCCTAATCAGGAGTTTGAGGATGATGATGGTGATGATGCTATGAGTAATCTTGGAAGTGAGGATTCTGATGGATCAAATTCTAGTATTAAACGTGAACCTAATGACAACAATCAAACACAGCCAACATCATCAGCAACATCAGCACGTTCTAACAGAAGAAAACCAGCTGCACCACAGTGGGTTAATCCAGAATGGCAAGAACCAGCTAGAACTGGTGATGAAGTTATAATTAATGGTGTTTGTGTTATGCAGACTGATGATTATGGTgttaagagagaaaatgaagagaCTATTAGAGTTGAACCTACACCAGTACAGGACAGATATGATGAGGATGCTGCGAGTGATGTATCATCTGTTTCTGGTAATAATGGACAGGAACGTGATTTAAGTCCATTGCCAAGTCCAAAATCTACTGCTAATAGTCCAATAACGTCACCAAGGCCACCATCGTCTCAACAAAATCCGCAAATTGAGGAAAGTCCTAAGGATACGATTAAGCATGAACCTGAAGAAACGTGGGATTATTGA
Protein Sequence
MVKKLLINQLVDEVSRLQQTLQRLQETSAQATARLEEELDNRRQHIARLESKLDRQRDYDEIKREISVLRSVDLSQIPTGEPGKSLEHLLMERTKALQQAETLKPPSTPDAIGGLASPMQRAATASPSHGSGVIGVGTGITPVTTLVSTQQVLQKRSTPTPTVGQTAVAASSILFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQAQQQQQQQQQPNQQQTSQSGVLQSQPTTAQITQMSQSPLQIGVHQNTTLYSQPTTPNLNHLQSPTDSASTSTNNNNNTTTPTPISGPAKSVTPLTTSLDTSAEKAPTPVPGHVTPVPPTPVPPTLTPLTASALTSPPASLQLPSSMIEAAMNGASLPGLSMSQSQPPKSPHDESCHNNNNNNNNSHHLANNNNNSIGSLSVLDSLKSPFRFDDRTHPFRFGDEFGAASMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVLLLKSLIPKKEYVSGKEQGMPTFGRPQDGGPPDINDERIAHMLSESGHLQMSRSEHDTSNDADSKSPSRLGCPSPFGKDRYDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRSDDLRGPRDFPPSAMFPHFFSGAQGIPGMERTQEEIRLALDAYHRELQKLNTAPGQNPALATLSGLPSLPGLLALHQQALQQNHMAANGGTGVGVQDLSLGKVDPRTKIMNGVTEEEKEKMEEAMRHAGSAFSLVRPKQEPSAQSTPGGSSASSPLGNSILPPAMTPSDEFTGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDEQAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQESQLQLGPPQPGSQHGPHPQPPPMMLTPPGPHHVASHAAQISIQELQKKQHQQQQMGLHSPHQMTSPLRNLHAHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLADTHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTADFYHASGSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPIPYSPYFNPNLATLMSNALKEQCSGLDLSMGSLKREPNQEFEDDDGDDAMSNLGSEDSDGSNSSIKREPNDNNQTQPTSSATSARSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKRENEETIRVEPTPVQDRYDEDAASDVSSVSGNNGQERDLSPLPSPKSTANSPITSPRPPSSQQNPQIEESPKDTIKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00046850;
90% Identity
iTF_00047758;
80% Identity
iTF_00046850;