Aalt010073.1
Basic Information
- Insect
- Aleiodes alternator
- Gene Symbol
- nfxl1
- Assembly
- GCA_963921955.1
- Location
- OY998103.1:2660575-2664341[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1.1 1.5e+04 -3.2 1.1 15 19 125 129 124 129 0.81 2 20 0.044 6.2e+02 1.2 1.9 4 10 160 166 159 166 0.97 3 20 3.5e-08 0.00049 20.7 17.7 1 19 174 191 174 191 0.99 4 20 1.1 1.5e+04 -3.3 1.3 6 10 217 221 216 222 0.55 5 20 3.7e-05 0.53 11.0 14.5 1 19 227 244 227 244 0.98 6 20 0.53 7.5e+03 -2.3 1.5 5 10 268 273 268 275 0.93 7 20 2.3e-06 0.033 14.9 11.2 1 19 279 298 279 298 0.93 8 20 6.3e-06 0.088 13.5 12.9 1 18 334 351 334 352 0.97 9 20 0.0057 81 4.0 8.4 1 12 386 397 386 397 0.94 10 20 0.006 85 3.9 1.5 2 10 402 410 402 410 0.95 11 20 1.6e-07 0.0022 18.6 14.1 1 19 416 434 416 434 0.91 12 20 2 2.8e+04 -4.2 0.8 6 10 463 467 463 467 0.95 13 20 0.00021 3 8.6 8.4 9 19 482 492 480 492 0.90 14 20 0.0025 35 5.2 4.8 1 12 502 512 502 512 0.96 15 20 0.85 1.2e+04 -2.9 5.8 14 18 543 547 543 548 0.89 16 20 0.00084 12 6.7 5.0 1 12 584 595 578 599 0.88 17 20 0.59 8.3e+03 -2.4 1.8 6 10 609 613 608 613 0.89 18 20 0.0076 1.1e+02 3.6 16.2 4 19 623 638 621 638 0.91 19 20 1.7 2.5e+04 -3.9 1.7 9 13 644 648 642 648 0.73 20 20 6.6e-05 0.93 10.2 8.3 1 16 683 697 683 700 0.95
Sequence Information
- Coding Sequence
- atgagaaagtTCAGGAGAGCTCAGGCCCAGAATCAGGCATCGATAGAGAGACACCTGAATGGTAAATCCATTGATTCATCCAGTGATGAGGAGAACGAAAGCACAAATGAAGCACTTCAGCAGGCAGTTACAAAAACATTGTCCACTTATGAATTTGAGGGtggagatattgaaaaaacgtTATCTTATTTAACGGATCTTTTTCAATCTGGTGGTGCAGTTTGCCTCATTTGCATTTCTACAGTGAAGAAAATAGATCAGaTATGGAGCTGTTCAATTTGTTATTCCTTCATGCATCTCACGTGCATTCGACACTGGATACGAGACAGTCTCACTTACAAGCACGAGAAAGGAATAACACCACTTTGGGCCTGTCCAAAATGCAGAACCGAGTATCCAGAATCATCAGTACCAACGAAATACTTCTGTTTCTGTGGAAAAACCGAGGATCCCGAGTCTCAGCCCTGGCGAATTCCACATTCCTGCGAGGAAAAATGCTCAAAACCGCTGCAACCAGCTTGCGGTCACAATTGCACACTCCTATGTCATCCAGGTCCCTGTCCCCCCTGTCCAAAAATGGTGTCAACAAGCTGTCACTGCGGCAAACAGCAGCCACAGCCACGTCGCTGCAACACAAAATCCTGGAGCTGCCAAACGCCCTGCAGCAAGCTCCTCCCCTGCGGCCACACCTGCAAACTCGACTGTCACCCCGACTCGTGTCCCCCCTGTTCCGAGATAATTACCACCTCCTGTCACTGCGAATCCTCCACAAAGTCCGTGGAATGCAGCAAAAGCTCCtggaaatgtgaaaaaaaatgctcaaagCAGCTGGACTGCAAGATTCACACGTGCGAGGAGATTTGCCATTTTCCTGGAACTTGCGGCGAGTGTCCAATCGCAAAAAACCGCAGTTGTCCATGTGGCAAAAAGAGATACAACGTCTCCTGCAGGCAGGCATCTCTCCCCACATGTGGTGACACATGCGGAAAGCTCTTAGATTGCGGTGCACATTACTGCAGCATGAGATGTCATCACGGTAACTGTGGCCAGTGTCTAGAACTCGTCAACAAAACATGCAGATGCGGTTCCTACACCAAGGAGATCTCCTGCATCAAAGAATTCCACTGCACAAAAAAGTGCACGAACATGAGAGCTTGTGGGAAGCATCCCTGCAACAAAAAATGCTGCGACTGCAGCAGAACAGGTGTTCATCAGTGCGAAAAGATATGCGATACTTCGTTGAACTGCCGCAAGCACAAATGCACGGCTCCTTGTCATTCTGGACCATGTTATCCATGCCAGAGGACAATAGTTATACAGTGTAGATGTGGAAACAGCAAGATTGAGGTGCCATGTGGCACGAGAAAGAGAATCAAGCCACCGCACTGCAATAAATTGTGCAAAATACCACCGATTTGTCATCATCCCAAGCAGGAATCACACAAGTGTCATCAGGGAAGCTGTCCACCTTGCAAGAAAATCTGTGGTTTGAGGTATGAGAGGTGTGGCCACAATTGCGTTGTTATTTGTCACTCGAAGGTTTGGGTCAAGGTGAGGATCAATGGAGTTTCACAGCCTGCTGGACCTTGGGAGATCTCCAAGGATCGACTGGAGCTGAAGACACTGCCATGTCCACCTTGTGAGGTCTCTGTCATGGTGACATGTCTTGGGGAGCATGAGACAAAACCCTGGCCTTGTCATATAGCTATTCCCAGCTCTTGTGGTCGAGAATGTGGTCGGAGGCTGCCATGCACCAATCACACGTGTCTACTGACTTGTCATAGGGTCAAGGGGGATGGAGGAGAGGGAACGGAGTGCATGGAGTGCGAGGAACCGTGCAAGCTGGAGAGGAAGAAAGGATGCACACATCTGTGCACAAAGGGCTGTCATCCAGCACCTTGTCCTCCATGCAAACAGAATGTTAAGGTTCCTTGTCACTGTGGAATTAATAGTCTTTATAAGAGATGTGTGGAGATCACGGATACCAAAGGGAAGGAGAGAGATGAGATGCTGAAGTGCGGGAATCAATGCCCAAGAATTtattctTGTGGACACCGTTGCGTGGACGATTGTCATCCTGGCACTTGTCGCTCCTCAGAATTCTGCAACAAACGTGTAAAAGTCACATGCAAATGccaaagaataaagaaaaatgccCAATGCACAGAAGTCCAAAAgggtaaaattaaaattgaatgtgACGATCAGTGCAGAGAactgaaggaagaaaaagagagaatgagacAAATTGAACTcgcaaaaaagagaaaggagGAGGAATTGAAGAACCAAAAGgaagtggaaaaattcgagagaaaatttaaacctagaaaaaaaggaaacgaCAGACTTGAGATAATCAATCATTCTGAGACTAAGGATCGTTTTTATATCATGAAATTCGTTTTCTTTGCTGTTATCTGCATGATAATTGCTGTTGTAACATTTCAGATGACTGAATGA
- Protein Sequence
- MRKFRRAQAQNQASIERHLNGKSIDSSSDEENESTNEALQQAVTKTLSTYEFEGGDIEKTLSYLTDLFQSGGAVCLICISTVKKIDQIWSCSICYSFMHLTCIRHWIRDSLTYKHEKGITPLWACPKCRTEYPESSVPTKYFCFCGKTEDPESQPWRIPHSCEEKCSKPLQPACGHNCTLLCHPGPCPPCPKMVSTSCHCGKQQPQPRRCNTKSWSCQTPCSKLLPCGHTCKLDCHPDSCPPCSEIITTSCHCESSTKSVECSKSSWKCEKKCSKQLDCKIHTCEEICHFPGTCGECPIAKNRSCPCGKKRYNVSCRQASLPTCGDTCGKLLDCGAHYCSMRCHHGNCGQCLELVNKTCRCGSYTKEISCIKEFHCTKKCTNMRACGKHPCNKKCCDCSRTGVHQCEKICDTSLNCRKHKCTAPCHSGPCYPCQRTIVIQCRCGNSKIEVPCGTRKRIKPPHCNKLCKIPPICHHPKQESHKCHQGSCPPCKKICGLRYERCGHNCVVICHSKVWVKVRINGVSQPAGPWEISKDRLELKTLPCPPCEVSVMVTCLGEHETKPWPCHIAIPSSCGRECGRRLPCTNHTCLLTCHRVKGDGGEGTECMECEEPCKLERKKGCTHLCTKGCHPAPCPPCKQNVKVPCHCGINSLYKRCVEITDTKGKERDEMLKCGNQCPRIYSCGHRCVDDCHPGTCRSSEFCNKRVKVTCKCQRIKKNAQCTEVQKGKIKIECDDQCRELKEEKERMRQIELAKKRKEEELKNQKEVEKFERKFKPRKKGNDRLEIINHSETKDRFYIMKFVFFAVICMIIAVVTFQMTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00047653;
- 90% Identity
- iTF_00047653;
- 80% Identity
- -