Basic Information

Insect: Aleiodes alternator
Gene Symbol: -
Assembly: GCA_963921955.1
Location: OY998101.1:6756417-6762183[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00011 0.014 16.5 2.3 1 23 125 148 125 148 0.97

2 17 0.032 4.1 8.7 1.5 2 23 164 185 163 186 0.95

3 17 7.5 9.7e+02 1.2 5.4 1 23 192 214 192 214 0.97

4 17 0.0015 0.19 12.9 0.7 2 23 220 241 219 241 0.97

5 17 2 2.5e+02 3.0 0.8 6 23 488 505 486 506 0.87

6 17 0.0017 0.22 12.7 2.0 2 21 517 536 516 537 0.94

7 17 2.2 2.9e+02 2.9 1.0 1 23 602 624 602 624 0.82

8 17 0.22 28 6.0 0.2 2 23 814 835 813 835 0.92

9 17 0.0061 0.78 10.9 0.6 1 23 843 865 843 865 0.98

10 17 0.035 4.5 8.5 0.6 2 23 954 975 953 975 0.96

11 17 0.51 66 4.9 0.2 2 23 986 1007 985 1007 0.95

12 17 0.0073 0.94 10.7 0.3 1 23 1084 1106 1084 1106 0.98

13 17 0.012 1.5 10.0 0.6 1 23 1174 1196 1174 1196 0.97

14 17 3.1e-05 0.004 18.2 0.6 1 23 1202 1224 1202 1224 0.97

15 17 0.016 2.1 9.6 3.7 1 23 1273 1295 1273 1295 0.97

16 17 0.0016 0.2 12.8 2.3 1 23 1386 1408 1386 1408 0.97

17 17 0.87 1.1e+02 4.2 0.6 2 23 1522 1543 1521 1543 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00011	0.014	16.5	2.3	1	23	125	148	125	148	0.97
2	17	0.032	4.1	8.7	1.5	2	23	164	185	163	186	0.95
3	17	7.5	9.7e+02	1.2	5.4	1	23	192	214	192	214	0.97
4	17	0.0015	0.19	12.9	0.7	2	23	220	241	219	241	0.97
5	17	2	2.5e+02	3.0	0.8	6	23	488	505	486	506	0.87
6	17	0.0017	0.22	12.7	2.0	2	21	517	536	516	537	0.94
7	17	2.2	2.9e+02	2.9	1.0	1	23	602	624	602	624	0.82
8	17	0.22	28	6.0	0.2	2	23	814	835	813	835	0.92
9	17	0.0061	0.78	10.9	0.6	1	23	843	865	843	865	0.98
10	17	0.035	4.5	8.5	0.6	2	23	954	975	953	975	0.96
11	17	0.51	66	4.9	0.2	2	23	986	1007	985	1007	0.95
12	17	0.0073	0.94	10.7	0.3	1	23	1084	1106	1084	1106	0.98
13	17	0.012	1.5	10.0	0.6	1	23	1174	1196	1174	1196	0.97
14	17	3.1e-05	0.004	18.2	0.6	1	23	1202	1224	1202	1224	0.97
15	17	0.016	2.1	9.6	3.7	1	23	1273	1295	1273	1295	0.97
16	17	0.0016	0.2	12.8	2.3	1	23	1386	1408	1386	1408	0.97
17	17	0.87	1.1e+02	4.2	0.6	2	23	1522	1543	1521	1543	0.96

Sequence Information

Coding Sequence: ATGTCTGAACGTTCACCGAGATTACGGGCGTTACGTCCTCGTCATTCGCTCATTCCAAGATCAACAGAAAAATCTCAGTCATCAATTGATAGTGACGCAGAGGGTAATGCAAGTCAAAAGAATGAATCAGAATTAGAGAATGCTGATGGTACAAGGGATGACAGTGATAGTGAGCCAAGGCTCGTTATCAAAGAAGAACCAGAAGATAATATTTCTGCTACTACTaatgctgctgctgctgctgttgctgaTGAAACAATCGAAGTGGATAGAAAATATATTTGTAATTCTTGTAAGCcttctcctgaattttccagTCTCATTGATTATCTACAGCATTTAAAAGCACgtcatcagcaaaaaaataaaaatcatcaatgtTCCTACTGCAGTTATTCTTATcagaatccaaaaaaattacagcgTCATATTATAACAGCTCATAAAGATGTACAGGGTGAAAAATCTGGTGAAATTGTACGAAGAAATAAATGTACAATGTGTAATTTTGTTGCTTATACACCAACGGATATGGAGAATCATCAGCGACTTCATCATTTGAAAAGACGTTTTTTCCGTTGCACAAAGTGTTCATATATGACTCATGTACGTGCACGTTACACAAAACACGTTAAATATCATTCTATGCCAATGATAAAATGTGATGACTGTGATTTTCGCACTCCTTACAAgtGGAATTTAGATCGACACACTCGAAATCatggtggtggtggtgcaTTTCAATGTCGTGCATGCAATTTTACCGCCGAAATACGTCAAAGTTTAACTGTACATGAAACAAATCACCATGAACCTCCAATTGGACATATAACTAAAAAAATGGCAAGTCCTTTTGAGAGAAAGCCGAAAAATTGTCCAAAACGTTACAATCAAGTTGGTGCCAGTGATTATCGTGAGGTGCAGCCTTTGGATAAAACAGCTCACACTCATCAAAACTCCGAAAATCCACTGGATGAAGAGGATGGAAAGAATGCTGTAGATGGTGCAGACTGTATTGCATtgaaatgtgaagaaaaaggCTGTCAATTTATTACTGCGTGGGACTCAGAAATGCAGAGACACGTAGCTGAATCACATGGTGGATCACAGAGccctaataaaaaaaaaccactgcCAATGCTAATTCCATTGAGTCCCGGAAGTAAATCAACAAATACGAATAGTAATACAACACCTAGCAGTTCTCCAACTACAGTACTCAATGTGCCACGTGTTCGAGTGAGGCCTGAGCTTGCAAAAATTGCTAGAGATACTGAAATAGCTAAATTATATAATAGTCGTGAgGATACGGTGAAAAAAGAGGTCAGTCCACCAAGTTcatttgaaagaagaaatgcAACATTCTTTGATAAACTCAAGGAACGCCTGATGACAACAACTGGAAATACAGGAATCAATAATCAGGTAGCAGTAAGTAGTGTGAACGATCTAAAGTGTTGGTGCACGTTTGAAGCAAGTAGCCCAGATGAATTATCAAGTCATAGAAAAACCCATCACACTGCGCTCAGTGTGTCTCTTGGCGTTTCGCGATGTCCAAAGTGTCGGAGACGTTGTAAAACTTCTAGTGATCTACAAATGCACGTGAAAATATGTCCAGcatataatgataataaaaataatagccAGGAGAACACTGTCAACAGTGATAACTATGTGACAACTTCTTCTTCCAATGATTTTGAGTTACCATTGCAAGTGGATTGGGATGGGAGTCACAATGGATTTATTTCCTCTGGATCCTCGaTGGATGGTGTATCGCAGAATTCAACTACTCGGCGTGTATTCAAGTGCCCTCATTGTCCATTTTGGGCATCAACTGCCAGTAGATTTCACGTGCATATTGTTGGACATTTGAATCGGAAACCTTTCGAGTGTTCACTATGTGCTTACAGATCAAATTGGCGATGGGATATAACTAAACATATTAAGCTCAAAGCAGCCAGAGATGCAGCTCATTTAAATGCCCGAGTACTCATGACCGATGAGACTGGACGTCGTAATTATTCAAAGTACAATAAATATCTTACTCAGATGGAGAATCAGGGTCACGATGATACCAGTATGGACGAGAATCAGGGTCTATTACGTACTGAAGAACCACCACGAAAGGTTCTCATTATGACTGATGAGAATCCTCTTTCTCTGGACGTAAATTCTAGTCAAACAGTTAAAACATTGACTGTTAGTGCGACAAGAACAACACCGGGTCAATCATTGTTGAAAATGGCTCCATCTACAAGCTCGCCTAATACTGCTTCGAGGATTTCCCCACAATCTACTCCATCAGAAGAAACTAAACGTACAATGTGGAAATGTAAACGATGCAACTATCGTGATTCAAGCAAAGAGATATTATTGCTTCACGTAAAGAGTCATTATGAAAGCATAGAAAAATCTCCAAAGGAATCGAATAAATTAACATGTACAGATTGTCCATTTGTAGCCAATGATTCTGAGTCATTGGCAATACATAAAGTACATCATCGTCCAAATCTTGAGGCTATTTTCAAGTGCTATCTATGTCCCTACTACGTGAGTACGAAAACTGAACTTTTGGAGCATGTACGTTTGCATGGTGAAGAATTGGCTGTAGTACATCAATCCGAGGCATCTGGAAAGCCCAAATCTCCAACAAATTCAACTTTAGAAACTACTCTACATGATAAAAAAGCATCatctgaaaaaacaaaagacaTAACACCTCtttcctctatttttaatGCTGCAGTTGAACGTAATGAAGGTCAAGCACCTCCATTACTCTTGGATACACGAGCATTACCAGACACACCAATGGTCTGGGTCTCTAAGCCAGATGGTACTTTTgcaaaaatgttaaaatgcCGTCACTGTCCATATGTATCATCTAGACGAGCTGAAGTTCGAGACCATGAGATTATGCATATGAATACCAATGAAAATGCTAATTTAATTTCCTGTCCAGACTGTAGTTTTATGTGTATTCAACGTGAAGTTATGGAGGCACATGCAAGTATGCATCTGGGATCATTGGGTACAGTTCATTGTCTAGTTGCTGATAATAGAAGTGATGCACAACAATTGGATGATCTCAAGAGTATTTTAGGATTAGCAAAAACACCTACACTGGGCTCAGAACCAGATCTACGTGATTCCAGATTAGTTCACAGTTGTAACAAATGTCCAGCTCgatttttatgtgaaaaagAATTGCGTATTCATCTGCGTTATCATGCAACTGCACTTGCCTACACTTGTGAATGGTGTTCTTATGCTGCTAGACAAACTGCACATCTATTGGCACATCAGAAAGCACATTCTACCGAGTATCAAGAGCGTACACGTTATCTTTCCTCATTGTATGGAAATTCTCAACGATTTCCACCACCACTTACCGCCTgtattgaagcaaaaaaacaaGCTGGTGATGGCAATGAGAATCAGTGTGCTTGGATTGTCGTTGAAGTTGCCAATCGCGATCAGAATCATCAGAATGGAGAACAGCAAGAAAATCAAGTATTCACTTGTACTAAATGTCCAGCAAGATACTTTAAACTTGATGCCCTTGAGTATCACATGACTCTGCATGGATCTAACAATAGATTTAAATGTGAAGAATGTGATTACTCGTCCAAAACAGcgcaaaatttgatgaaacatCAGGTTGTTCATAGAAGATACAATGAAACAACTGAACAAATTATTTCCCGGCTACCATCACTCAATTCAGAAATGATTACAGTCATCAATGGAAGTGGAGATGGTAATTTTACCTATTCAGAAAATCCAAGAAATGACGAGCTCAAAGACAGGAAATTCAAGTGCCATAAATGTTCATCAACTTTTGAAAAACGTGAGCAGTATCGTATACATTTAGCACTTCATGgatcaaaacaaaaatatagaTGTAATCAATGTGATTATGCTGTTAAATGTTACGATACTTGTGTACAACATTTGAAAGATCATATAATGAATGGTGAAGTACAAGCATCTACAAATCCACCAGAAATAcattatgaaaatgattatgatgaaattgaagaaactaATACAGGTAAAACTCGAAGAAAATCAACGATATCTTCGGGAACTattgtaaataattcaatgagtggatcttcaatgagaaatggtagaatcaaagaaaaaagatacaAGTGCCATAAGTGTCCATCTGTTTTTGCAAAACGTGAACAGTATCGTATACATTTATCCCTTCATGGCTCAAAACAGAAATATAGATGTAATCAATGTGATTATGCAGTTAAATGTTATGATACTTGTGTACAGCATTTGAAAGAACATGTGGTGAATGGTGATGGACAAGCATCATCTCCCAAACAATCAGATGTTGATGATATTTATGAAGTAGAAAAATCAGATTCAGGAAAGACACGAAGGAAATCCACAATTTCTTCTGGATCTCCTATTGCGAATAATTTACCAAGTGGATCTGTGGGTGATGGTGTATCAGCAGTTTCAAATCAGGATAAACAAACAATCATGTTGCTGCAAAGGAAAGCATCCATGAcatcaaatgaaataaataatgattgtTTGAGATGTTCAGAGTGTCCATTTTCAACTGATGATCAAACTATACTTGATAGTCATAAAAGAAGACACGGAATAGATAGACTCACTCCACCCTGTCCCCATTGTAATTATGTACctagaaaagatgaaaatgttGGTGAACATGTTAAACTTCATTTCACAAGAATGTATAAACCTGATGGTTATTTAATTATCGAAATGCTCTCTctcaaaatggaaaaacttggtggtaataaaaatgacaagaataaagaaaacaaTGAACAATTACTTTTTCGTGAATGTTCAGACGGAAAATACTTGCCTCTATCGGATATAAGTACGTTGCCAATGAGCAATAAGAGAGGAAGAAGTGCTAAAGAGAAAATCATCATTGATCCAACAACAGGAGAAGCTACACATCGTGTAAAAGATTAG
Protein Sequence: MSERSPRLRALRPRHSLIPRSTEKSQSSIDSDAEGNASQKNESELENADGTRDDSDSEPRLVIKEEPEDNISATTNAAAAAVADETIEVDRKYICNSCKPSPEFSSLIDYLQHLKARHQQKNKNHQCSYCSYSYQNPKKLQRHIITAHKDVQGEKSGEIVRRNKCTMCNFVAYTPTDMENHQRLHHLKRRFFRCTKCSYMTHVRARYTKHVKYHSMPMIKCDDCDFRTPYKWNLDRHTRNHGGGGAFQCRACNFTAEIRQSLTVHETNHHEPPIGHITKKMASPFERKPKNCPKRYNQVGASDYREVQPLDKTAHTHQNSENPLDEEDGKNAVDGADCIALKCEEKGCQFITAWDSEMQRHVAESHGGSQSPNKKKPLPMLIPLSPGSKSTNTNSNTTPSSSPTTVLNVPRVRVRPELAKIARDTEIAKLYNSREDTVKKEVSPPSSFERRNATFFDKLKERLMTTTGNTGINNQVAVSSVNDLKCWCTFEASSPDELSSHRKTHHTALSVSLGVSRCPKCRRRCKTSSDLQMHVKICPAYNDNKNNSQENTVNSDNYVTTSSSNDFELPLQVDWDGSHNGFISSGSSMDGVSQNSTTRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAARDAAHLNARVLMTDETGRRNYSKYNKYLTQMENQGHDDTSMDENQGLLRTEEPPRKVLIMTDENPLSLDVNSSQTVKTLTVSATRTTPGQSLLKMAPSTSSPNTASRISPQSTPSEETKRTMWKCKRCNYRDSSKEILLLHVKSHYESIEKSPKESNKLTCTDCPFVANDSESLAIHKVHHRPNLEAIFKCYLCPYYVSTKTELLEHVRLHGEELAVVHQSEASGKPKSPTNSTLETTLHDKKASSEKTKDITPLSSIFNAAVERNEGQAPPLLLDTRALPDTPMVWVSKPDGTFAKMLKCRHCPYVSSRRAEVRDHEIMHMNTNENANLISCPDCSFMCIQREVMEAHASMHLGSLGTVHCLVADNRSDAQQLDDLKSILGLAKTPTLGSEPDLRDSRLVHSCNKCPARFLCEKELRIHLRYHATALAYTCEWCSYAARQTAHLLAHQKAHSTEYQERTRYLSSLYGNSQRFPPPLTACIEAKKQAGDGNENQCAWIVVEVANRDQNHQNGEQQENQVFTCTKCPARYFKLDALEYHMTLHGSNNRFKCEECDYSSKTAQNLMKHQVVHRRYNETTEQIISRLPSLNSEMITVINGSGDGNFTYSENPRNDELKDRKFKCHKCSSTFEKREQYRIHLALHGSKQKYRCNQCDYAVKCYDTCVQHLKDHIMNGEVQASTNPPEIHYENDYDEIEETNTGKTRRKSTISSGTIVNNSMSGSSMRNGRIKEKRYKCHKCPSVFAKREQYRIHLSLHGSKQKYRCNQCDYAVKCYDTCVQHLKEHVVNGDGQASSPKQSDVDDIYEVEKSDSGKTRRKSTISSGSPIANNLPSGSVGDGVSAVSNQDKQTIMLLQRKASMTSNEINNDCLRCSECPFSTDDQTILDSHKRRHGIDRLTPPCPHCNYVPRKDENVGEHVKLHFTRMYKPDGYLIIEMLSLKMEKLGGNKNDKNKENNEQLLFRECSDGKYLPLSDISTLPMSNKRGRSAKEKIIIDPTTGEATHRVKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00047605;
90% Identity: iTF_00047605;
80% Identity: -