Basic Information

Insect: Aleiodes alternator
Gene Symbol: -
Assembly: GCA_963921955.1
Location: OY998102.1:9871598-9875131[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0003 0.038 15.1 1.0 1 23 113 136 113 136 0.93

2 13 0.0099 1.3 10.3 4.6 2 23 249 271 249 271 0.91

3 13 9.4e-05 0.012 16.6 0.8 3 21 325 343 323 344 0.93

4 13 5.5 7.1e+02 1.6 7.6 3 23 440 461 439 461 0.95

5 13 0.0057 0.73 11.0 1.8 1 23 510 533 510 533 0.96

6 13 0.0017 0.22 12.7 0.9 2 23 578 600 577 600 0.94

7 13 0.00048 0.062 14.4 0.1 2 23 629 651 628 651 0.92

8 13 0.0072 0.93 10.7 3.6 2 23 715 737 714 737 0.96

9 13 0.098 13 7.1 4.2 3 23 752 773 750 773 0.92

10 13 0.00014 0.018 16.1 0.1 2 23 821 843 821 843 0.93

11 13 0.088 11 7.3 0.9 1 23 922 944 922 944 0.98

12 13 6.4e-05 0.0082 17.2 0.9 2 23 958 980 957 980 0.93

13 13 0.11 14 7.0 1.2 1 23 1055 1078 1055 1078 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0003	0.038	15.1	1.0	1	23	113	136	113	136	0.93
2	13	0.0099	1.3	10.3	4.6	2	23	249	271	249	271	0.91
3	13	9.4e-05	0.012	16.6	0.8	3	21	325	343	323	344	0.93
4	13	5.5	7.1e+02	1.6	7.6	3	23	440	461	439	461	0.95
5	13	0.0057	0.73	11.0	1.8	1	23	510	533	510	533	0.96
6	13	0.0017	0.22	12.7	0.9	2	23	578	600	577	600	0.94
7	13	0.00048	0.062	14.4	0.1	2	23	629	651	628	651	0.92
8	13	0.0072	0.93	10.7	3.6	2	23	715	737	714	737	0.96
9	13	0.098	13	7.1	4.2	3	23	752	773	750	773	0.92
10	13	0.00014	0.018	16.1	0.1	2	23	821	843	821	843	0.93
11	13	0.088	11	7.3	0.9	1	23	922	944	922	944	0.98
12	13	6.4e-05	0.0082	17.2	0.9	2	23	958	980	957	980	0.93
13	13	0.11	14	7.0	1.2	1	23	1055	1078	1055	1078	0.97

Sequence Information

Coding Sequence: atggCATCAACATTGGCACGTGAAACAATGCTAATATCGAGTGAAGTGGACAGTGAAGCTTCAAGTATAGGCGATGAAAGAGATACGAATAAACGAACACGCGAGGATACTGATTCCAGTAGtccaaaaaaaagacgaaaacaAACAACTCCAGTACGTGTATCAGCATCGATGTTAACAACCAATGAATTACCAGAATCAGAGGAGGAACATGACAATGAAAACGATGATAATATGAAtggtataaaaaaatttgacgaagtaattgatgataatgaaaagcAACTGAACGAAGAACAAACTGTATCTAGCAGAGACGAGAATTTAAATACAGAGTTCAGATGTCAATACTGCAGTCGTACATTCGAGGATAATGAGAGCCTTTTGCAACATAATGAGAGTGATCATGGAATTAGTAATCCATTTAATAGTAAtgttcaaataaaaatggaacCACAAAATCCACAAGAAGAATCAGATTATCCAGTTAATTTGTCTGGTCTtagtataaaaaattttgcaacATCTTGGCTATCAAGTCATGCACAATTACAGGGACAAGAGCCAACTGATTGGACAGGACAAAATCCCATTAAATCAAGTACATCACATTTATCTGGCTTACCATTTACCAGTGGTCTTGCGCAATACCTTCCTCTACCAGGTTTTTCACTCGGTGATCCTGGACAATTACCCAGGCTCCCAATTGGTCCAGCACCAATAAGAATATTCAATCCAGATGCATACTGCGATCTCTGTAACAAGGAATTTTGTAATaagtattttttgaaaacacaCAAGGCTAATAAACACGGAATCTACACTGATTTGCCGCAGCAAAATCCAAATGACAATAATGGAATACCTTATACAAGTTTGCCATTTCAAATTAGTGGTAAAATCGagcagcagcaacaacagcagcagcaattATCGGCGAGAATTGATGCATCAATGACGAATCCAGTGATCTGTCAAATTTGTCAAAAGCGattcaaaaatgaagattctCTTCGTAAACACAAGCAAAAGTGTCGACTCGAAAGTCATCAGAGTGAATTACAATCGGAAAGTCAATCATCAACAGCAACGCGAGAATATAGTGCATCAATTGGTAATGAAGAGAAAGATATATCTACAAGTAGTCCAAGTGCAATGGAATCACTATTCAAACAGGAGTACGGAATAGAACAAGAGGATTCAAAATTTATGCCAGCTCCAAGACACTTGTCACCACAATCCAGTCAACAAGCACGTGATTCCGGCTTTAATGCCGATAGATTACGCAGATTAGGTGTTTTAAATATAGAGGCATTCTGTGAAATTTGCTGCAAAGAATAttgcaataaatattttttacgtACCCACAAAATGAAGAGACATGGTATTataattcatgataatgaaaaatcaccaAGTACACCAGGTGCTGCAGCAACATGGCATCAGATACAAACTAGtccattaaatttaattgttgctGATAATAATCCAGGTGGTTCAGAGTCAAATGATAAAAGTGAAGAGTATGAGTGTAAATCATGtggtattaaatttcaaacacaGGGGCTTTATCAATTGCATCATGCAAAAATGCACGAAGGTAGTGACGACGAGAAATCAGCAAAACATGATACTGAAGAGGAACGTACAGATTCAATATCTGAGGAtctacaaaaattacaaacaaTGATATTACAATTGAATGGTTTAGAATCAAGTAAAACATGGACATGTGAAATATGTGGTAGAGAGTGTGAAAATCGATTAACATTAAAAACTCATATGACACTTGAGCATTCAAGTAATTTATCAGATGAGCCATCACTTTCACCTGGTCAGTTaactgaaaattcattgaacaaTACTAGTGCCAATTTAGTATATTGTACAATTTGtgagagagaatttcaaacTAACGATGCCCTCAAGCAGCACATTGCCGAGGATCACAATCCAACATCaccaataattaaaaataattcacaagTAACAAGCAATATTCCACAAATATCATCAGCAATAACTGGAGCTCAATTAACTTCAATTCCACCGACTTCATCGTCTTCATCGATTCCACCAGTTCCGCCaattcccccaccacccgACAAAAAATTATCCTCATTAACACCAACATCAAGCTACTGTGAAATTTGTAACAAAGAATTATGCAACAAATACTTCATGAAAACACACATGCAAAGAATGCAcggtattgaaattgaaaatggtTCACAAATTGGTGGTGTTATTTGCAATATCTGTAACAAAGAATTGTGCAGCAAGTATTTTTTACGTGTACACAAGCACAATACGCATGGAATTGTCGACGACAGTACAACAACAAACAATAGTAAACAGGAGAATTTCGAACCACCACCGCCGAATATCGATGATTCTGCACTAAAACCAGATCAATTGGGTGACTTGAGCCATCGTTACTTCACTCATTTCAACGAAGTATGTCCAATTTGTAATCGAAGATTCCGAAGTATCAAATGGTTGAAAGCTCATCTACTTGGTGATCACGGTAAGACGGGTATTGACAAGTGGCGTGAATTGGAACAGCAGTACCAGAATCCATCGAGAAGTAGAGTTGGTTCAGTTGGTGCATCGAGTAGAACAAATCCGCCAAATCAAAATATAAAGATACCAAACGGTCTAGACATTGGGCAAACCCTAAAAACCGGTGATTATGGAGGATTAGGTAATCAGGTGCTCTCGACATTGTTCGGTAATAATGAGGAGCAGCAAACGAAGAATTATCGGTGCTCCTATTGCAACTTTACAACACCAGTGCTGCCGTTTCTATTTTTACACGAACGTTCACATATGAGTAATCAGGAGCAAATGAATACAGAGAATAGTCTTCAATGTCCTATATGTTCGCAAGCTTTCACCCAACCAGAACAACTTCATCATCATTTAGTGGTGCGACATCAATTTTCGAACCTATTATCGCAGTATCAACAATTAACAGCTGGCGAATTGCGAACAGATGCTAATCAGGAGCGTCAAGAGGCAGTTGATCAAAAGGAAGCAGAATTTAAGGATGAAAAATCTGGTGATGATCAGATGAGTCCAGTGGTACAAACAACTGTTGAAATACCTAAAAATCAGAAGGAAGAAACTGGTGCCGTTCATGTTACACCTCAGGGTGTTTACAAATGTGCTGAGTGTGGTTTTGCAACAGCTAATCTTCATCGAATAAAATCACATGTTAAGAAAAATCACAAGGACAAGAGTGATCCAGCTGAGAGTGTTATTGCTGAATTGAGCAAGACACTACGTGAAATAGCTAATAAACACAAAGTACCAGCTAGTTATGCTATGCCACAGGACATGAATTCAAATCCagattcaacaataatgcagcCATTTATTATTGAAGAGAGAAATAGTGTTTTTGGTGATGATACATCGACTCATGACAGACGATTTGCACCAGCTCTGGTTTATCTACCGGTACGTACACGTATCAACAGTATCCTAACTGCTTCCTTTACCCTTAGTCCAGCCTCAATTATTTCATAG
Protein Sequence: MASTLARETMLISSEVDSEASSIGDERDTNKRTREDTDSSSPKKRRKQTTPVRVSASMLTTNELPESEEEHDNENDDNMNGIKKFDEVIDDNEKQLNEEQTVSSRDENLNTEFRCQYCSRTFEDNESLLQHNESDHGISNPFNSNVQIKMEPQNPQEESDYPVNLSGLSIKNFATSWLSSHAQLQGQEPTDWTGQNPIKSSTSHLSGLPFTSGLAQYLPLPGFSLGDPGQLPRLPIGPAPIRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYTDLPQQNPNDNNGIPYTSLPFQISGKIEQQQQQQQQLSARIDASMTNPVICQICQKRFKNEDSLRKHKQKCRLESHQSELQSESQSSTATREYSASIGNEEKDISTSSPSAMESLFKQEYGIEQEDSKFMPAPRHLSPQSSQQARDSGFNADRLRRLGVLNIEAFCEICCKEYCNKYFLRTHKMKRHGIIIHDNEKSPSTPGAAATWHQIQTSPLNLIVADNNPGGSESNDKSEEYECKSCGIKFQTQGLYQLHHAKMHEGSDDEKSAKHDTEEERTDSISEDLQKLQTMILQLNGLESSKTWTCEICGRECENRLTLKTHMTLEHSSNLSDEPSLSPGQLTENSLNNTSANLVYCTICEREFQTNDALKQHIAEDHNPTSPIIKNNSQVTSNIPQISSAITGAQLTSIPPTSSSSSIPPVPPIPPPPDKKLSSLTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGSQIGGVICNICNKELCSKYFLRVHKHNTHGIVDDSTTTNNSKQENFEPPPPNIDDSALKPDQLGDLSHRYFTHFNEVCPICNRRFRSIKWLKAHLLGDHGKTGIDKWRELEQQYQNPSRSRVGSVGASSRTNPPNQNIKIPNGLDIGQTLKTGDYGGLGNQVLSTLFGNNEEQQTKNYRCSYCNFTTPVLPFLFLHERSHMSNQEQMNTENSLQCPICSQAFTQPEQLHHHLVVRHQFSNLLSQYQQLTAGELRTDANQERQEAVDQKEAEFKDEKSGDDQMSPVVQTTVEIPKNQKEETGAVHVTPQGVYKCAECGFATANLHRIKSHVKKNHKDKSDPAESVIAELSKTLREIANKHKVPASYAMPQDMNSNPDSTIMQPFIIEERNSVFGDDTSTHDRRFAPALVYLPVRTRINSILTASFTLSPASIIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00047512;
90% Identity: iTF_00048208; iTF_00047512;
80% Identity: -