Basic Information

Insect: Aleiodes alternator
Gene Symbol: -
Assembly: GCA_963921955.1
Location: OY998105.1:3627069-3633957[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.041 5.2 8.3 0.3 3 23 535 557 533 557 0.93

2 10 0.0081 1 10.6 2.3 1 23 563 587 563 587 0.98

3 10 0.00035 0.045 14.8 0.5 1 23 593 617 593 617 0.96

4 10 0.0048 0.62 11.3 0.4 3 23 625 647 623 647 0.94

5 10 0.0021 0.26 12.4 2.1 1 21 654 676 654 678 0.95

6 10 0.0012 0.16 13.1 0.3 2 23 686 709 685 709 0.95

7 10 2.7e-05 0.0035 18.3 0.7 1 23 715 739 715 739 0.97

8 10 0.00049 0.062 14.4 1.4 3 23 747 769 745 769 0.92

9 10 7.7e-05 0.0099 16.9 1.1 1 23 775 797 775 797 0.99

10 10 0.00033 0.043 14.9 0.3 1 23 871 896 871 896 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.041	5.2	8.3	0.3	3	23	535	557	533	557	0.93
2	10	0.0081	1	10.6	2.3	1	23	563	587	563	587	0.98
3	10	0.00035	0.045	14.8	0.5	1	23	593	617	593	617	0.96
4	10	0.0048	0.62	11.3	0.4	3	23	625	647	623	647	0.94
5	10	0.0021	0.26	12.4	2.1	1	21	654	676	654	678	0.95
6	10	0.0012	0.16	13.1	0.3	2	23	686	709	685	709	0.95
7	10	2.7e-05	0.0035	18.3	0.7	1	23	715	739	715	739	0.97
8	10	0.00049	0.062	14.4	1.4	3	23	747	769	745	769	0.92
9	10	7.7e-05	0.0099	16.9	1.1	1	23	775	797	775	797	0.99
10	10	0.00033	0.043	14.9	0.3	1	23	871	896	871	896	0.95

Sequence Information

Coding Sequence: ATGTCTAATGACAGTGGAATTATTGGCAAACAGAGACACGTGCCTCGGATAccaaataattcgattttatcAACACAATCAAGAGATATTTGGAGTACATTTGAATCAAATTACTTTGGTAATTCCAATTGTCAGTCTACAAGCGTGTCCTGTGAGCCAACAATCACTTggacaattgaaaataaacaatttaagGAAATTAATCATTGCTCGAGTGAAATCGAGTCAATGATTGTTACTTCTGGAAGAAATTGGAATGGATACCacTGCACAAATGGAAAGCACGAGGATCTCCCAAAGCCTCCGAAGATCCGTGACTCCTCGAAATCTCATCCAAAAACCGTCGAGGACATCGAGAGATGGTTAAAGATAAGAGCCGACCCCTGCCCAACAATGGACCAATCAAAATCCGACGTAGAGACAGTCGACCGCTACCTAAACACCGATTTATCCTCAACTTTCCTGGAAAAAGATGCGGACGTTCTCTCAATCGAGAAGTTGACCCTCGGCTACGATCCATCCTACGAGTTCCAGGAACTCCAAAGTGAAAAGTTCCTTGAAGTCTGCGGAAAAGACGCTTTCATCCTTCCGGAGTTCCAATTGGACAATTTGGACCCCTTGACACTCGCAAACAACGATATGATGGTTGCTGGGGAGATCCTTCCCTCCACAAGCACCCACCCTGAAGACTTCCCATCCCCCAAGGCCCCCCAGTCCCCCCTGAAACCGCAAATCCCCGAATTCGACCTTTTAACCCTCTCAAACCCTGAAAAACTCGAATTATCGACTCCAAGTCCTGACCAGGCCCTCGCCGAGGCTCAGCCAAGGCTCGATGGACCTCCGAGGCTCATCCAGGCCTCGTCCGAGGTTCAATCAAGAGTCGCAGGACCTCCAAGGCTCCTCCATATCTCGTCCGAGGCTCAACCAACACTGGATGAACCGCCAAGGCTCATCCAGACCTCGACCGAGGCTCAGCCAAGACTCGCCAGTGCACCTCCAAGGCTCATCCAAACCTCGTCCGAGGCTCAACCAAGACTCGCAGGACCGCCAAGGCTCATCCAGATCTCGGCCGACGCTCAGCCAACACTGGATGGATCCCCAAGGCTCATCCAGACCTCGTCCAAGCCTCAATCAAGCCTCGATGAACCTCCAATGCCCAGCCAGGCCTCGTCCGGGCCTCAGCCAAGCCTGGCCCAAGCCTCGCGATCAAAATTAAAGACTagaatagtaaagaaaaagCGCAAACCCCCaaaatttgacgaaaaaatgcAATACGAAGAGGGAGAGTATCAGACTGACAGTAAAGATGGTATAATGGCGGTTGTAGCTATATCAACGGACAAAGTATCGAACATGACGCAAATTGTTATCAATACGGGGAAAGAGGAGCAGATTTATCAGGGGAAAACGTCGGAATTGATGGAAGCAACAGGTTACTTTCCGAAATTACCGAAAATCGAGACTTGGAGGAGCTTAGAAAAAGAGGCTGTTCCTAGTAATCATGAGGTGATTATCACCAATGCTCTTCAAGAGTTGGGATATACGGAAACGGGGCTAATTTCGATGTCACTGACGTTGAGCGCCAATGGAAAGACTTGGATTTGCCCCATGGACGATTGCCGCAGGGAATTCAACAGATTGTGCGCACTAAAAGGACACTTGTTGGCGCATTATGGGGTGAGGCCATTTAAATGTGACCAGGTCGGCTGCACGTGGGCATTTCACTCGGAATTTAAGCTCAAACGTCACAAAGAGAcgcatttgaagagaaaagacTATGTTTGCCAGGTGCCAAACTGCAATCGGAGATTTACGACGATCTATAATTTGTGGACACATGAAAAATTGCACTCGAGGCCTAGTCGAATTGCTTGTCATGTTCCTAATTGCGCGGAAAGGTTTCAAACGAAGAGAGCTTTGGAGATTCACATGAAATCACATGATCAGGAACACGCACCTTATGTTTGCCAGCAGGAGGGATGTGGAAAGAGGTATTACAGCTCGAATGCTTTGACTTCACATCAGAGGTGCCATAGTTATAAGGAGgTCGATATAAAATGCGGTTGGATCGGTTGCGGTAAAATTTTCGACAAGCCCTGTCGTTTGAAAGCCCACGTACGTTCTCACACTGGTGCAAAACCCTATTCCTGCACTTATCCCGGCTGCGAATGGGCATTTTCCTCATCCAGCAAGCTCAAAAGACACGAAAAGAAGCACACAAATGAGCGCAAATTTCTCTGCGACTTTCCCGGTTGCAGCAAGGCCTTCATGAGATCAGAACACCTGAAAGAGCACAGATTGACGCACAAAGAGGGCCGATATTTCCAGTGCTACATGTGTGATGCACGTTTTTCCGCGAAAAGTAGCCTCTACGTACACATAAAAAAGCATCAAAAACGAGAGAACGAGGGGGAGGCTCCTCCCCCCCTTCTCGCAAAAATAGGGGGTCTATCTATAGATAAGTGCAGATTGGAAGATTCAGAGAGTGTTAAAATCCTGTGCAACGAACTTGCCATCGAAGAAGCggtgaaaaacaatttaaatttgaatttaaaattggAGCGAAATGCGCGGGAAACTGCAGAGAATCAGGGAATTATGAAGTACAAGTTTGTCTGTTCTTTTGCCAgttgtggaaaaatttatgCTTCAAAATCGTCGTTAAGGGGTCACATGACGAGAGTTCATGGTGCTGATGATGGTTTTACCATGGAGAAGAGGGAAAAATCCTCGGGAGATGAtttaaattatgttttttatggTAATGATGAGAATGGGGGGGTTGTGGGGGAGGGAGAGGTGCCAATGGCTGTCGAGGCAGATGAAGAGATCAATGAGTGTCTTCCTGAACCTGAACCACCACCTCTCATCAAAATCAGAAAATGCCATGGAGCCGCAAGAACTGGCTTGACCTATCTCGATGtctggaaattgaaaaaaaaaattaatacaacACTCAATTCGGTTGGACCATCTGATGTTGTACTTGGGAGTGGTGATATTGATGATGGATTGATGCTGAGTGAGGAATTACCATCTATGTACTATCAGGATGAACTTGGTACTGAGTGCCAAATTTTAATGCTCGATTCTTCGGCCAATGAGAGCACCATTAATCTTAGGGATCTCGAGtaa
Protein Sequence: MSNDSGIIGKQRHVPRIPNNSILSTQSRDIWSTFESNYFGNSNCQSTSVSCEPTITWTIENKQFKEINHCSSEIESMIVTSGRNWNGYHCTNGKHEDLPKPPKIRDSSKSHPKTVEDIERWLKIRADPCPTMDQSKSDVETVDRYLNTDLSSTFLEKDADVLSIEKLTLGYDPSYEFQELQSEKFLEVCGKDAFILPEFQLDNLDPLTLANNDMMVAGEILPSTSTHPEDFPSPKAPQSPLKPQIPEFDLLTLSNPEKLELSTPSPDQALAEAQPRLDGPPRLIQASSEVQSRVAGPPRLLHISSEAQPTLDEPPRLIQTSTEAQPRLASAPPRLIQTSSEAQPRLAGPPRLIQISADAQPTLDGSPRLIQTSSKPQSSLDEPPMPSQASSGPQPSLAQASRSKLKTRIVKKKRKPPKFDEKMQYEEGEYQTDSKDGIMAVVAISTDKVSNMTQIVINTGKEEQIYQGKTSELMEATGYFPKLPKIETWRSLEKEAVPSNHEVIITNALQELGYTETGLISMSLTLSANGKTWICPMDDCRREFNRLCALKGHLLAHYGVRPFKCDQVGCTWAFHSEFKLKRHKETHLKRKDYVCQVPNCNRRFTTIYNLWTHEKLHSRPSRIACHVPNCAERFQTKRALEIHMKSHDQEHAPYVCQQEGCGKRYYSSNALTSHQRCHSYKEVDIKCGWIGCGKIFDKPCRLKAHVRSHTGAKPYSCTYPGCEWAFSSSSKLKRHEKKHTNERKFLCDFPGCSKAFMRSEHLKEHRLTHKEGRYFQCYMCDARFSAKSSLYVHIKKHQKRENEGEAPPPLLAKIGGLSIDKCRLEDSESVKILCNELAIEEAVKNNLNLNLKLERNARETAENQGIMKYKFVCSFASCGKIYASKSSLRGHMTRVHGADDGFTMEKREKSSGDDLNYVFYGNDENGGVVGEGEVPMAVEADEEINECLPEPEPPPLIKIRKCHGAARTGLTYLDVWKLKKKINTTLNSVGPSDVVLGSGDIDDGLMLSEELPSMYYQDELGTECQILMLDSSANESTINLRDLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00047496;
90% Identity: -
80% Identity: -