Basic Information

Insect: Aleiodes alternator
Gene Symbol: -
Assembly: GCA_963921955.1
Location: OY998097.1:16547976-16551092[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00025 0.033 15.3 3.9 1 23 260 282 260 282 0.98

2 10 0.022 2.9 9.2 11.8 1 23 288 310 288 310 0.95

3 10 5.9e-05 0.0075 17.3 6.6 1 23 316 338 316 338 0.99

4 10 0.00071 0.092 13.9 1.6 1 23 344 366 344 366 0.95

5 10 2.1e-06 0.00028 21.8 1.6 1 23 372 394 372 394 0.97

6 10 3.9e-05 0.005 17.9 0.3 1 23 400 422 400 422 0.97

7 10 0.00083 0.11 13.7 1.5 1 23 427 449 427 449 0.97

8 10 1.1e-05 0.0015 19.5 0.0 1 23 455 477 455 477 0.97

9 10 1.6e-06 0.0002 22.2 2.0 1 23 556 578 556 578 0.97

10 10 2.5e-05 0.0033 18.4 4.6 1 23 588 610 588 610 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00025	0.033	15.3	3.9	1	23	260	282	260	282	0.98
2	10	0.022	2.9	9.2	11.8	1	23	288	310	288	310	0.95
3	10	5.9e-05	0.0075	17.3	6.6	1	23	316	338	316	338	0.99
4	10	0.00071	0.092	13.9	1.6	1	23	344	366	344	366	0.95
5	10	2.1e-06	0.00028	21.8	1.6	1	23	372	394	372	394	0.97
6	10	3.9e-05	0.005	17.9	0.3	1	23	400	422	400	422	0.97
7	10	0.00083	0.11	13.7	1.5	1	23	427	449	427	449	0.97
8	10	1.1e-05	0.0015	19.5	0.0	1	23	455	477	455	477	0.97
9	10	1.6e-06	0.0002	22.2	2.0	1	23	556	578	556	578	0.97
10	10	2.5e-05	0.0033	18.4	4.6	1	23	588	610	588	610	0.97

Sequence Information

Coding Sequence: ATGTGCACAACACCTGGTAATCCTGGCACTGGTTTTGGGTATGCGTGGTCATTTAATCCAACAACTGAACAACGTGAATCAAcacaacaacagcaacaaaaTGATTTAACAGGAAATATAAATTATGCAGTTAATAATAATCAGGATCAAGGAACAAGTCAAAAAATACAAGTTGATGTTAAGCCAAAAGTCACAAATCAATCATCACATAGAcgtcaaatatttcaaatgacTGACAATTGCCAGACTAATCAGCATCatcaacagcaacaacaacaacaacagcaacaacaacaacaacaatcTGGTAATGGTGGTACATCAAGTACACACAATCAGCCACATAATACCCATCACGTGACACATGTGCGTACAAAATCAAAGCATCACgatgttttttcattgacatGTGACAAAGGTGGTTGTAATTGTGATGCAACACATACAACACCATCAACACCACCAGCAACAATATTTCCAAATACCCTTGTATTTACAACAACTGATAAGCACAATATGTCAAAACATTTTATGACACCACTTGGTCCAATACAATTGACTGCTGAAGAGTGCAATGAAATACTGATGAAACGTGCAGCAGcagcatcatcatcatcatcaacacAATCAACAAatacaaataatttgaatcaaAATACGGGTGAAAGTAGTCATTTTGGTCATGTATTAACACACATTAATGCAACACAAATTGATAGTAAAATAAAACAAGGACAGGACATTGGTAGCCAGGCACGTGTACCAAAAGAAAGACCATACTCATGCTCTGAATGtggtaaatcatttttattgaaacatCATTTGACAACACATGCGCGTGTACATACTGGTGAACGTCCACATATATGTGTACACTGTGGTAAATCATTTGCACACAAACATTGTTTACATACACATTTATTATTACACAGTGCTGAAAGACCATATCAATGCCgtgaatgtaaaaaatcatttacatTGAAGCATCATTTGGTAACACATACACGTGTACATACACGTGAACGTCCATTTATATGCCAAGAATGTGGACGTgcatttccattaaaaagaCATCTTGTAAcacattcaaaatttcattctggTGAACGTCCATTTGTTTGTGGTGAATGTGGTGAATCATTTTCACAAAAAGATCATCTTACAATGCATTCAAGATTTCATGGTAGTTTACATCCATTTGTATGCTCTGATTGTGGTGCTACATTTCAACGTAAATTTGAATTAGTTAATCATGGTAGATTACATGGTAGAGTACCACATTCATGTACAGCATGTGGTAAAGAATTTTTACAGAAGAGAACATTATTAGCACATATGCGTTTACATACGGGTGAAACACCATTTGCCTGTACTGTTTGTGGTGAAGCATTTCCAAGAAAAGGAGATCTTGTTGCACATACAAAATTACATAATGCTAATGCTGATGACAAGTCATTGACATGCAGGTTGCATGCAGGTGATAGGACACTTGTAACGGATCTCTGCGGACTTGCTGCTGCATTTCAGCAGACACCAGGACACTTTCTAACTCAGAATACCGGAGGGCATCAGATGAATGGACCAATTGGTACACCAGGTGTATCACACATGCAGAGTGCAACACAGACATCTCCACCAGCTGGTACAGGACCAAAACCAAAGCCACATATATGTCCAGATTGTGGTCGTGGATTCGCTCAGAAGCACGGTTTGTCACAGCATCAGAGACGCCATACAGATGGTAGTTGTCACATAAGATCACATGTTTGTGATAAATGTGGTAAGGCATTCTTCCAAAAGAATCATCTGTTGCTGCATCAACGTCAGCACATGGATCCACCGCCCAGTATACTGAGGCAGCAGCAGAGACAGGCTGCACAGGCAGCTGCACAGGCTGCACAGCAGCAGGGTCAACAGCAGACCCAGCAGAGTCAACAGGTGCAGCAGCAGCCTCAGGTCCAGCAGGTACAGCAACAGGTACAAACACAGCAGGTACCACAGCAAGTTCAGGTTGTTCAGGTACAGCAACAAAATCAACAGCAGAATCAACAGCAAACGTGTACTGTTGATACTAAAGCAATACAGATGCAGACTATTGAGCAGCAGGTGCAGGAGCAGGTACAGCAGCAGGTCCAACAGCATCAACAACatcagcagcagcagcaacagcaacaacagcagcaacagcaacaacaacagcagcaacagTGCAATGAGGATACTAATAAAGCGATACAGTTGAATGTTACCATGTGA
Protein Sequence: MCTTPGNPGTGFGYAWSFNPTTEQRESTQQQQQNDLTGNINYAVNNNQDQGTSQKIQVDVKPKVTNQSSHRRQIFQMTDNCQTNQHHQQQQQQQQQQQQQQSGNGGTSSTHNQPHNTHHVTHVRTKSKHHDVFSLTCDKGGCNCDATHTTPSTPPATIFPNTLVFTTTDKHNMSKHFMTPLGPIQLTAEECNEILMKRAAAASSSSSTQSTNTNNLNQNTGESSHFGHVLTHINATQIDSKIKQGQDIGSQARVPKERPYSCSECGKSFLLKHHLTTHARVHTGERPHICVHCGKSFAHKHCLHTHLLLHSAERPYQCRECKKSFTLKHHLVTHTRVHTRERPFICQECGRAFPLKRHLVTHSKFHSGERPFVCGECGESFSQKDHLTMHSRFHGSLHPFVCSDCGATFQRKFELVNHGRLHGRVPHSCTACGKEFLQKRTLLAHMRLHTGETPFACTVCGEAFPRKGDLVAHTKLHNANADDKSLTCRLHAGDRTLVTDLCGLAAAFQQTPGHFLTQNTGGHQMNGPIGTPGVSHMQSATQTSPPAGTGPKPKPHICPDCGRGFAQKHGLSQHQRRHTDGSCHIRSHVCDKCGKAFFQKNHLLLHQRQHMDPPPSILRQQQRQAAQAAAQAAQQQGQQQTQQSQQVQQQPQVQQVQQQVQTQQVPQQVQVVQVQQQNQQQNQQQTCTVDTKAIQMQTIEQQVQEQVQQQVQQHQQHQQQQQQQQQQQQQQQQQQQCNEDTNKAIQLNVTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00351349;
90% Identity: iTF_00047466;
80% Identity: -