Basic Information

Insect: Aleiodes alternator
Gene Symbol: salm
Assembly: GCA_963921955.1
Location: OY998098.1:5416648-5426352[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.9e-06 0.00064 20.7 0.9 1 23 413 435 413 435 0.98

2 9 9.8e-06 0.0013 19.7 2.1 1 23 441 463 441 463 0.98

3 9 0.062 7.9 7.8 3.8 2 23 912 933 911 933 0.98

4 9 4.3e-08 5.5e-06 27.2 0.6 1 23 939 961 939 961 0.97

5 9 5.9e-05 0.0076 17.3 2.6 1 23 971 993 971 993 0.98

6 9 0.0021 0.27 12.4 1.9 2 23 1314 1335 1313 1335 0.97

7 9 0.03 3.9 8.7 1.0 1 14 1341 1354 1341 1355 0.92

8 9 1e-06 0.00013 22.8 2.1 3 23 1533 1553 1531 1553 0.96

9 9 2e-07 2.5e-05 25.1 0.9 1 23 1559 1581 1559 1581 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.9e-06	0.00064	20.7	0.9	1	23	413	435	413	435	0.98
2	9	9.8e-06	0.0013	19.7	2.1	1	23	441	463	441	463	0.98
3	9	0.062	7.9	7.8	3.8	2	23	912	933	911	933	0.98
4	9	4.3e-08	5.5e-06	27.2	0.6	1	23	939	961	939	961	0.97
5	9	5.9e-05	0.0076	17.3	2.6	1	23	971	993	971	993	0.98
6	9	0.0021	0.27	12.4	1.9	2	23	1314	1335	1313	1335	0.97
7	9	0.03	3.9	8.7	1.0	1	14	1341	1354	1341	1355	0.92
8	9	1e-06	0.00013	22.8	2.1	3	23	1533	1553	1531	1553	0.96
9	9	2e-07	2.5e-05	25.1	0.9	1	23	1559	1581	1559	1581	0.98

Sequence Information

Coding Sequence: ATGCAACTTATGAGATGGAGTATAACGAGAAGATTAGATAGGAGAAATATACAGCAGCGTAGAAATTCAGTTGacattaattgtttaaatgaTATAGATGCGCGTGTTTATTCACCGGGTTCACATTATTTCGAAGACGAGAATGAAACGGGCTCGGAGAGTGAAGATACAGGACGTGTACCTGGTGATGAGGCAGTTGATTTAACGTCAAATCGTTCGAATCATGACGATGAGGATGAACGTGAAGAGCTGCCAATGGAGGAGGACGAGGAGGAACAAGTTGATGAACAATTTGAACAAGAGGAGGATGAAGAGGGTACACGTAAACAGATGAGAAATCGTCAGgatgctgaaaataataatagtttCATTGAAGGTAGTACATCGAGTGGTTTATTTGCACCAGCTGCTGGTGTTACGAGTCACGTTACCCTCGAGGCACTACAAAATACAAAAGTAGCAGTTGCCCAATTTGCTGCTACTGCATTGTCTAGTGGTGCTGATCCTGAAGCAGCACTACAAGATTTGGCGTTGTTACAAAGTACACTGTATACATTGCAGCATCAGCAGGTATTTCAATTGCAATTGATAAGCCAATTGCAGCAACAATTGTCCATAACACATGGTCAAACACCAACTGGACAGGCATCGAGTGTTGATGGCGAGAAAGAGACATCAACAGTACCGGCAGAATCACCTCTGCCAACGATTCATCCAAAACCACTGTCAAGCCTGACATCACCACCATCATCAAGACCACCGAGTCATCATCCACTCATGACATCAACTGTCTCTGTAACAACATCAACATCACCCGTAACCGTCCCATCATTTCCACTCGAGCGACCAAGTTCCAGCAGTGTATCACCAATTGGCATAACAATACCATCAACAATACCAACAACATCAACTGCAACAACAACAACTGGCATCGACACATCAACAACCATGTGTAACACAACAAATACAACAACAATGTCACATCACATACCACCATCGCTCTGCTCATCTCTTGCATCAACAATTCTAACGAACAATGATCCATTACCATTGAATGAACCAAATACCCTGGAAATGCTACAAAAACGTGCACAAGAAGTCCTTGATAATGCAAGTCAAGGATTACTAGCTAATAATTTGGCTGATGAATTAGCATTTCGTAGTGGAAAAGGTGGATCACGTTTATCACCGTACGATTCAAAATCAACTGGTGGACGTGGTGAGCCATTCTTCAAGCATCGTTGTCGCTACTGCGGCAAAGTATTTGGCAGTGATTCAGCTCTACAGATCCACATTAGATCACACACAGGTGAGCGTCCATTTAAATGCAACGTGTGTGGAAGCCGTTTTACAACCAAGGGAAATCTCAAGGTTCACTTCCAGAGGCATACAGCCAAATTTCCACATGTCAAAATGAATCCTAATCCTGTGCCTGAACACCTTGATAAGTACCATCCACCACTACTCCAACAATTAGCAGCATCTGGTCAAAGACCAATAACGTCacctccaccaccaccaccaccaccactacCTACAACGTCTGGTCCAACTGGCCCACAACAACAATCACCAATAATACCACAATCATCATCACAACAACAACAATCAACAGCAAGTAATATATCACATCATGCGTCCCAATTTCATTCATCAAGTGGCCATGGTTTTATACCACCACAGCCTCCTCTACCCCTGAGTTTGACACTACCAGCAGCAGCAGCGGCTGCAGCAGCAGCTGCTGCTGCCGCTGCTGGTAtgccatcgatttatcatCGTGTACCAATGTTAAATCAACGTGCTGATGTACAAGAACAGGATTTACcagaaaatttgagtaaaaCAATACCAACGtgtacaattaattcattgacaaCTGGTGTATCAACGTctacaacaacaacaacatcACCATCACCACCGCCAGTAATTAGTTCACCGAGATCTCCAACACCGATATTATCCAACAATATTACTCCAATTCATTCCTTTCATCATGAGCGTAGTGAGGATGTTATAAAACGCGAGCAAAGAGCATCACCAGTAGCTGAACAAAGACCACCGAGTCAGTACAACGATACACTCACgataaatctaaaaaaagaaCCGGAAGAACAAGAAGAACCAATAGAAGAGGAGCCAGAAGAATTTGAGGCTCATTCTCCTAGACAACGTTACTTAGATCAGCCACATTTGATGGCATCACCTCAGAATGTCAGTGAGAGAATGCTACATAATCAACAGAACTACGAAGACTGCAGTATGGACAGTAGTAAAGCGAGTGGTAGACTAGAAGCAGACGGTGATACAGAGGCAGACGAAGAGATGGAGGAGCAACCTGAGAACCTATCCGGCAGAAGAGTAGGAGACCTTGGTCCTCCATTGGGCAACTATCATCCCTCAGGTGCATCACCAGCCAGTAGTACTGCAAGCAGCGGAAGCCTACAAACCTCATTCGCAGGTCTCCTTTTTCCTCCAGTAGCACCTGGCCAGTCACACCAACCACTTCCACCTCACTTAGGCTCAAATTCCATTCATCCACCTGGCGTCAACGTCAGCGAAAGCATGATTGTTGATCCAGCCAGAGATCCAGCTATTTACTCGAGCCTACTACCAAGACCCGGTAGCAACGACAATTCCTGGGAAAGCCTCATCGAAATAACAAAAACCTctgaaacatcaaaattacAGCAATTAGTTGACAACATTGAGCACAAATTGACTGATCCAAATCAGTGTGTCATTTGCCATCGTGTATTATCTTGTAAAAGTGCACTACAAATGCACTACAGAACCCACACAGGTGAACGTCCATTCAAGTGCAAAATTTGCGGCAGAGCATTTACAACAAAGGGCAATTTGAAGACGCACATGGGTGTACATCGGGCAAAACCCCCACTTCGTGTACTTCATCAGTGTCCGGTTTGCCACAAAAAGTTCACAAATGCCCTGGTACTTCAGCAGCACATACGCCTTCACACAGGTGAACCAACGGATCTGAGTCCCGAACAGATACAAGCAGCTGAAGTAAATGAATTCCCACCTGGTTACGGTCCACATCCACTGGCTTCATTTCTACCCCAAGGCTTTCCAACACTTCATCCACCACCAGGTGGCTTTCCCCTGGGTTTTCCACCATCTCGCCATCCAGCATACGATCGTCTAGCCTCACACGACAGTGAAATGGACGCCAAAGATCTGAGATCCCAGCTGCCACATCTACAAATGCATCAGCAAAGATACATGGATGAACATTCGGAGGATATGGATGATCAGGAAGAACCAGATGACGacgaaagaagagaaaatgatgaaatttgcGGTGATGATACAAATGAGAGAAACTGCGCTGACATTGAGGAGGAAAATGAGACTGAAAGAGACGAAATTAAAGAATCTTCAATGccggaaaatttttcaacatcatTGGCTGCATTAGAGAATCAAGTTAGGACAATAACAACAATGGCATCTGTTGGATCAACTTCACCATTAGATAGATacaattcaagtgaaaaaagcaATAGTCCACCTAGTTCGATTGTTGGTACACCACTTGATCTAACACCACGTGCCTCATCAACACCGGGTTCAGTTGTATCAGCATCAacgccaccaccaccaccaccgccaccaccaccaccaccaacgTTGCAGCATCATCCACATCCATTTGGTATGTTTGCTGGTCTACTGCAGGCagtatcatcatcatcatcagtcAGTGGTATACAATCACCTGGTGTTGGTGGACCAATCAATAGTATAGCATCAATGAATTCAGTTAATTCGGGAAACAGTGGCAATGGAGGAGGAGgcggaggaggaggaggaggtggTGCACTAGCATCATTAACAACATCAGCTGTATTAGCTGCATCATCAACCTACAATCCGCTTGGTCTCGCTGTTGGAGGCCCAGCAGTACGTGGCAACACAACGTGTAATATCTGCTACAAAACATTTGCGTGTAATTCTGCATTGGAGATACACTATCGGAGTCACACGAAGGAGCGGCCGTTCAAATGCACCATTTGTGACCGTGGCTTCTCAACAAAGaatGACGATACAAATATGAGAACGTGTGAATGCGTGGAACAGCATAGATCGTCCGTCCCAAATGCTAGAACAAGAAGACGGAGGAATGAGGATAGGAAGAACCGGGGGCGGACGGTTAACGGAGGGGGGCGGGTTGCTCTGACGTCTACGTCCAACGTTCACCTGCCCCCGCGGATGCCAGCCGCCCTCGGGCTTCTCACCTCGAACCACGTCCTCCTGggcAACATGAAGCAGCACATGCTGACCCACAAGATCCGTGACATGCCACCGCATTTATTCAGCGACTCGAAGCCAGGACAACAGCCTCAGCAGCCATCAACACCTCAGCAGCACAATCAGGACCAGGAAAACTCGCAGAGTTCGATGTGCACTGATGAATCGAGCCTTCCACCTCCACCGCCACCACCACCGCCACTACCACCACCTCCATCTCCAATGCCACCAGCAACAATGGAGTCACCAATGCCAGTAAAAAGATCGCCAACAGAAGGCGATCTTCCAGCACCAAAGAGGCcgaGCATGTCCAGCAAGCACTTGTGCCAGGTTTGCAATAAGAATTTCTCATCATCCTCGGCGCTACAGATCCATATGAGAACGCATACGGGCGACAAGCCTTTCCGATGCACCGTCTGCCAAAAGGCCTTCACCACCAAGGGCAATCTCAAGGTGCACATGGGAACACACATGTGGACGAACGGTGCATCGAGAAGGGGCAGAAGGATGTCACTGGATCTACCACCTCTGCCAATCACACCAAAGGACTCAGAGTTCCTTCAACGACGACCGGATCTCTTCTATCCTTATCTACCAGGGCCATTCCTTAATGGTGTACAGCAGAAACTGAACGAGATATCAGTGATACAAAGTAACAATGGACTGCAAGTAACACATCCCGTATCAGCAAATAAATATGCTGGTTTATTTGGTACAATTTATGGAGGTGGTAATATAAGTAATTCAAGTGTCAATGGATACACTATTGATAAACAATCATTAACATCAAATAGTCCAATTGACGATGGTAAATCATTGGTACCATCTGGCTCAATGCTATTTCATACATCATCACCATCACATTCACCTGGTACACCATCATCAAATActggaaatcaaaattcagCAAGTATACCAACATGGAACAGTGATAATCATTATGAACGTGATGGTCCATCACGTGAATCAGAGAGTGATGGTGCTACACCACCAAGATTACCACCACCATCAGCAAACAGAAGTGAGGGACTTGCTGCGTGA
Protein Sequence: MQLMRWSITRRLDRRNIQQRRNSVDINCLNDIDARVYSPGSHYFEDENETGSESEDTGRVPGDEAVDLTSNRSNHDDEDEREELPMEEDEEEQVDEQFEQEEDEEGTRKQMRNRQDAENNNSFIEGSTSSGLFAPAAGVTSHVTLEALQNTKVAVAQFAATALSSGADPEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITHGQTPTGQASSVDGEKETSTVPAESPLPTIHPKPLSSLTSPPSSRPPSHHPLMTSTVSVTTSTSPVTVPSFPLERPSSSSVSPIGITIPSTIPTTSTATTTTGIDTSTTMCNTTNTTTMSHHIPPSLCSSLASTILTNNDPLPLNEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRSGKGGSRLSPYDSKSTGGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQLAASGQRPITSPPPPPPPPLPTTSGPTGPQQQSPIIPQSSSQQQQSTASNISHHASQFHSSSGHGFIPPQPPLPLSLTLPAAAAAAAAAAAAAAGMPSIYHRVPMLNQRADVQEQDLPENLSKTIPTCTINSLTTGVSTSTTTTTSPSPPPVISSPRSPTPILSNNITPIHSFHHERSEDVIKREQRASPVAEQRPPSQYNDTLTINLKKEPEEQEEPIEEEPEEFEAHSPRQRYLDQPHLMASPQNVSERMLHNQQNYEDCSMDSSKASGRLEADGDTEADEEMEEQPENLSGRRVGDLGPPLGNYHPSGASPASSTASSGSLQTSFAGLLFPPVAPGQSHQPLPPHLGSNSIHPPGVNVSESMIVDPARDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPPGYGPHPLASFLPQGFPTLHPPPGGFPLGFPPSRHPAYDRLASHDSEMDAKDLRSQLPHLQMHQQRYMDEHSEDMDDQEEPDDDERRENDEICGDDTNERNCADIEEENETERDEIKESSMPENFSTSLAALENQVRTITTMASVGSTSPLDRYNSSEKSNSPPSSIVGTPLDLTPRASSTPGSVVSASTPPPPPPPPPPPPTLQHHPHPFGMFAGLLQAVSSSSSVSGIQSPGVGGPINSIASMNSVNSGNSGNGGGGGGGGGGGALASLTTSAVLAASSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKNDDTNMRTCECVEQHRSSVPNARTRRRRNEDRKNRGRTVNGGGRVALTSTSNVHLPPRMPAALGLLTSNHVLLGNMKQHMLTHKIRDMPPHLFSDSKPGQQPQQPSTPQQHNQDQENSQSSMCTDESSLPPPPPPPPPLPPPPSPMPPATMESPMPVKRSPTEGDLPAPKRPSMSSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPGPFLNGVQQKLNEISVIQSNNGLQVTHPVSANKYAGLFGTIYGGGNISNSSVNGYTIDKQSLTSNSPIDDGKSLVPSGSMLFHTSSPSHSPGTPSSNTGNQNSASIPTWNSDNHYERDGPSRESESDGATPPRLPPPSANRSEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01274014;
90% Identity: iTF_00048145;
80% Identity: -