Basic Information

Insect: Aleiodes alternator
Gene Symbol: -
Assembly: GCA_963921955.1
Location: OY998108.1:5144747-5149158[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.017 2.2 9.5 2.7 2 23 84 106 83 106 0.94

2 28 0.016 2 9.7 3.3 1 23 189 211 189 211 0.97

3 28 0.0039 0.5 11.6 0.4 1 23 217 239 217 239 0.97

4 28 2.9e-05 0.0037 18.3 3.4 1 23 245 267 245 267 0.97

5 28 0.00016 0.021 15.9 5.8 1 23 275 297 275 297 0.98

6 28 0.0034 0.44 11.7 1.3 1 23 303 325 303 325 0.99

7 28 3.3e-05 0.0043 18.1 0.1 2 23 364 386 363 386 0.96

8 28 0.03 3.9 8.8 0.1 3 23 392 413 390 413 0.90

9 28 0.0022 0.28 12.4 3.4 1 23 515 537 515 537 0.98

10 28 2.6e-06 0.00033 21.6 2.6 1 23 545 567 545 567 0.98

11 28 3e-05 0.0039 18.2 0.1 1 23 575 597 575 597 0.99

12 28 0.0071 0.91 10.7 5.2 1 20 603 622 603 625 0.94

13 28 0.006 0.77 11.0 0.3 3 23 696 717 694 717 0.92

14 28 0.014 1.8 9.8 1.3 3 23 803 824 802 825 0.95

15 28 0.01 1.3 10.2 0.2 1 21 834 854 834 855 0.94

16 28 6.8e-05 0.0087 17.1 0.7 3 23 862 882 861 882 0.96

17 28 0.0025 0.33 12.1 0.7 2 20 896 914 895 916 0.93

18 28 0.097 13 7.2 1.3 1 23 928 950 928 950 0.96

19 28 0.0008 0.1 13.7 3.9 1 23 953 976 953 976 0.97

20 28 0.00029 0.038 15.1 1.7 1 23 1007 1029 1007 1029 0.99

21 28 0.00023 0.029 15.4 5.9 1 21 1038 1058 1038 1060 0.95

22 28 0.0024 0.31 12.2 6.1 1 22 1064 1085 1064 1085 0.96

23 28 0.0026 0.33 12.1 1.5 2 23 1090 1112 1089 1112 0.96

24 28 0.00017 0.021 15.9 1.2 1 23 1122 1144 1122 1144 0.98

25 28 0.00078 0.1 13.8 1.1 1 23 1150 1172 1150 1172 0.96

26 28 7.3e-05 0.0093 17.0 1.8 1 23 1177 1199 1177 1199 0.98

27 28 1.7e-07 2.1e-05 25.3 0.5 1 23 1207 1229 1207 1229 0.99

28 28 0.0025 0.32 12.2 3.6 1 23 1236 1259 1236 1259 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.017	2.2	9.5	2.7	2	23	84	106	83	106	0.94
2	28	0.016	2	9.7	3.3	1	23	189	211	189	211	0.97
3	28	0.0039	0.5	11.6	0.4	1	23	217	239	217	239	0.97
4	28	2.9e-05	0.0037	18.3	3.4	1	23	245	267	245	267	0.97
5	28	0.00016	0.021	15.9	5.8	1	23	275	297	275	297	0.98
6	28	0.0034	0.44	11.7	1.3	1	23	303	325	303	325	0.99
7	28	3.3e-05	0.0043	18.1	0.1	2	23	364	386	363	386	0.96
8	28	0.03	3.9	8.8	0.1	3	23	392	413	390	413	0.90
9	28	0.0022	0.28	12.4	3.4	1	23	515	537	515	537	0.98
10	28	2.6e-06	0.00033	21.6	2.6	1	23	545	567	545	567	0.98
11	28	3e-05	0.0039	18.2	0.1	1	23	575	597	575	597	0.99
12	28	0.0071	0.91	10.7	5.2	1	20	603	622	603	625	0.94
13	28	0.006	0.77	11.0	0.3	3	23	696	717	694	717	0.92
14	28	0.014	1.8	9.8	1.3	3	23	803	824	802	825	0.95
15	28	0.01	1.3	10.2	0.2	1	21	834	854	834	855	0.94
16	28	6.8e-05	0.0087	17.1	0.7	3	23	862	882	861	882	0.96
17	28	0.0025	0.33	12.1	0.7	2	20	896	914	895	916	0.93
18	28	0.097	13	7.2	1.3	1	23	928	950	928	950	0.96
19	28	0.0008	0.1	13.7	3.9	1	23	953	976	953	976	0.97
20	28	0.00029	0.038	15.1	1.7	1	23	1007	1029	1007	1029	0.99
21	28	0.00023	0.029	15.4	5.9	1	21	1038	1058	1038	1060	0.95
22	28	0.0024	0.31	12.2	6.1	1	22	1064	1085	1064	1085	0.96
23	28	0.0026	0.33	12.1	1.5	2	23	1090	1112	1089	1112	0.96
24	28	0.00017	0.021	15.9	1.2	1	23	1122	1144	1122	1144	0.98
25	28	0.00078	0.1	13.8	1.1	1	23	1150	1172	1150	1172	0.96
26	28	7.3e-05	0.0093	17.0	1.8	1	23	1177	1199	1177	1199	0.98
27	28	1.7e-07	2.1e-05	25.3	0.5	1	23	1207	1229	1207	1229	0.99
28	28	0.0025	0.32	12.2	3.6	1	23	1236	1259	1236	1259	0.98

Sequence Information

Coding Sequence: ATGTGCCTACGCTCTCTGAATACAAGTTACAAGCTCCTGATGAAGGTCATAGAGACTGATGGAAAACTGCGACAGCAATTGTTACAGTCTCGTATCAACAAAAATCAACAAGATTGTGAGCCAACATCCCACAATGCAACTGgtgaagctgaaaaaaatgatccagGGACTTGtggattttataaaataaatttcgtcGATACTGGTGCATTTGCCAGTAACATGGGGACAGTCCATCAATCTCTATTGGTCTGCAATCTTTGCCACAATTCATTCGGCAATGCTGCTGAATTACGCCAGCACAAGCACAAGACGCACGATAATATTGATAATCCTGGTGGAGCAGACTGCCACGATTCTGCAGTTGTTGAGATAAAGGATGAGGGGTTATTAGTGTCTCAAGACAGCAATATCGAGTCACCTGCTCCAGAGGAattcattaaagaaaatttttcagagaaaatggACGATATAATTGAGGACGACGTTGTCAGTGTCAATAGTGCCACTTCCAATAAATCGCTTCCGGATGCGAAGGCAATTGGAGTACGAGGTGAAAGAAAATTCGCTTGCAAATATTGTCCTcggaaattcttgagaataaGACACTATGAGGATCATCAGAATACACATTCCCGTAAAGAGCCGTATACTTGTGCAACTTGTCCAAAAAGATTCAGAACATATGCTGCTCGTTGGATTCACGAGCAGAGCCATAAGGAAACGACACAATACATTTGTGATATATGCCAGCGAAGTTTCAAGCACAAGCGGTTGGTGAAGAGACACATGCTTAACCACTTACCACCGGAGGACTGGGACTTTGAATGCAAAGTCTGTAAATTCAAGTTTAAAAGATCAACGTGCTTGAAGGAACACATGAAAGTACATTCAGAGAATCATCCGTACAAATGCGATATTTGTGGTGCCGCATATGATCGTGGATGTGACATGTCGAGGCACAGAAAACGTCATCTAGTTGCGAAgactgacaaaaaaaagaagaagcaatCAGGCTATAAGGGTAAACGAATTCATGAGCTAAAATCGGATAGGGCATCTGGTGACATTGTAAAGAGTCAGCCAATAGTATGCAGCTTATGTGGAATGAGTTTCAGCGATGCTGATACATTCAGCAGTCATATGGAGACGATTCATCAATCCAAGTGGGTCTGCATTATTTGCGAAAGTTCGTTTGCAACATCTGATGAATTAATGCAGCACAAGCGCGAGATACACTCTGATGATATTGATGATGCTGGTGGAAAAGACTGTCAGGATTTTGGAGCTATCAAGATGAAGGAAGAGAGGAAATCAATCTCTGAAGACGATGAAGAATCAGCTTTGCTTACTGATCAACAACTTCCTCGGGAATTTGGAGAAATACAACCAGTGGAGAATTCGGATCTTGGAACTATTGAAGTGAAGGAAGAAAGAACATCAGTCTGCGAGGAATCTCCTTCACTCGCTGATCAACAACTAGTGGAAAATCATGAGAATGTCCAGAATTTCCAGTTGATTCTACAGTCTTCGGAAGGCCCGTTTAGTTGCGAGACTtgtcacaaaaaattcaaaacacgTGCTGCTAGATCAGGTCACCAGAGGATCCATGTCCGAGTGCACTATCATCACTACACTTGCGATTATtgcctgaaaaaattcacacgtAGATACAGTTTAGTCAGACACATGGTGACTCACTTGGGTCCACCAAATGGGCTATTTAAATGTGAAGTGTGTGGATCTTCATTCAACGGTTTAAGCCCATTGAAAGCTCACATGAAGGTACATACAGAAAAGCGAATACACGAATGTGACGTCTGCGGTATTAAATTTCGACGTAAGCATGACATGCTGAGGCACAGAAGTTGTCACAGAGATAAAGAGATTAATAGAAAACAACAGCAACAATTGTCGCAGTCAAATGACGATGATGATCAACAAAATTCTGAACAGAAATCCCAGGATTTATCTGATAAAGCTAAAAAGAGTGAATCGCTGATGTGTGGATTATCCGAAATAAGTTTCGTTGATGTCAGTACATTCGACAGTCCCATTGAAACATTGCATCAATCAAAATGGGCCTGCAAtctttgtgaaaattcatttgcaaCTTCTGAAGAGTTACAGCAGCACAATTCCAAGACACATTACGATAATATTGATGATGCTGGTGGAGAAGAATACAAagattttgtagctcttgatgATGAAACACTAGAATCTCAACACTCTGAAAGCAAACCACCTGCTCCAAAGGCAAACACATTAGAAAAAGTCCCTGAAAAAGACGAAGAAGTGGTTGAGAAGGGAATTAGCAGTATTAACTGTGATATATGCTgcttttcaattgataaaGCCTTTATGCCTGAGCACAAAGAAATACATGAATCATTCAACGTGTTGTGCAGTACTTGTCAGATGAAATTTCCCACTGCCTATGACTTCATTAAACACAACCGTGAGGCCCATCATCGTTTCAAAAACACATGCATCAGATTTTTCTGCAGAATTTGCAACGAATCTCTGCCGACTCCAGAGTCACTCCAAGAGCATCACAAAGTGTGTGAGCCACGTGCCCCATGCAAGTACTGCGACCGAATATTCAATGAATCCGAATTACAGCAGCATATGAAGAAAGAGCATCCTGACAAAATTCTGGAGAATGAGGAAGTCGTTGAATTACAATGTCCTCAATGTAAAGTAGTTTTCAcggataaaaaacaatttatggATCATACTCATGAACCCAGTGAAGAGATCGACCCAAAGGCATCAATTTATAGATGTGATCTATGCCCAAAGACATCATGCAGTCTTCCAAGTATTTCATTACACAGGAAATGGCATGAAAATCATAGATGTCCAGAGTGcaatggaaaattcgaaactTCTTATGCATTTTGCAGACATGTTCGGCGAGTACATGAAATAAATATGACCTTCACAAAAACTGCTTCTCAACTACGACCCAAGAAACTTTGCAAAACGCGTATAATCCATCCTGAACAAGATTCATATACTTGTAACAGTTGTGACATGAAATTTAAAACCAGTGCTGCTAGATTGTCGCACCAACGGACTCATGCTATAGCAACACAGTACACTGATCATACTTGCGATTACTGCCAGCGAAATTTTAGATATAGATCCGCTTTAATTAGACACATGCGCTGCCACATGACGAAATATGAATGTGAAAcgtgtttcaaaaaattctgtaatcATCATAATCTAATAATACATCAGAAGCGCCAGGCGGACCTGACTTGCCCGAAGTGTTCGATGGAATTCACAGACTTCTGTTCATTCACTGCACATTTGAAAATAGTTCACGAAATAAGGATACCtgttaatggaaaattttcttgtgAACAGTGCTCAAAGAGGTTTCCAAAATTGCGACTCCTTCGGGATCATCAGAATATCCATTCCCGGAAGGAACCATACCGCTGTGAGACTTGCGACAAGACATTTAGAACGTATGCAGCGAAATGGTTGCACGAGCAGAGGCATAAAAGAGACGCCTACGTTTGTGATTATTGTCAGAACTCGTATCAGACGAAGCAGAATCTAAGTAGACACATGCAGCTCCATTTGCCACCAGAATTATGGAGATACGAATGTAAAATTTGTCAAGCTAAATTCAAACGACCTGCAAATCTGCAGGACCACATGAGATCACATTCACAGAATCAACGTGTTTATGAATGTGACATTTGCAAAGCCCAATATCGTCATAAAGATTCTATGTTGAGACATAGAAAGCGTCGTCATGAAAGTGCATGA
Protein Sequence: MCLRSLNTSYKLLMKVIETDGKLRQQLLQSRINKNQQDCEPTSHNATGEAEKNDPGTCGFYKINFVDTGAFASNMGTVHQSLLVCNLCHNSFGNAAELRQHKHKTHDNIDNPGGADCHDSAVVEIKDEGLLVSQDSNIESPAPEEFIKENFSEKMDDIIEDDVVSVNSATSNKSLPDAKAIGVRGERKFACKYCPRKFLRIRHYEDHQNTHSRKEPYTCATCPKRFRTYAARWIHEQSHKETTQYICDICQRSFKHKRLVKRHMLNHLPPEDWDFECKVCKFKFKRSTCLKEHMKVHSENHPYKCDICGAAYDRGCDMSRHRKRHLVAKTDKKKKKQSGYKGKRIHELKSDRASGDIVKSQPIVCSLCGMSFSDADTFSSHMETIHQSKWVCIICESSFATSDELMQHKREIHSDDIDDAGGKDCQDFGAIKMKEERKSISEDDEESALLTDQQLPREFGEIQPVENSDLGTIEVKEERTSVCEESPSLADQQLVENHENVQNFQLILQSSEGPFSCETCHKKFKTRAARSGHQRIHVRVHYHHYTCDYCLKKFTRRYSLVRHMVTHLGPPNGLFKCEVCGSSFNGLSPLKAHMKVHTEKRIHECDVCGIKFRRKHDMLRHRSCHRDKEINRKQQQQLSQSNDDDDQQNSEQKSQDLSDKAKKSESLMCGLSEISFVDVSTFDSPIETLHQSKWACNLCENSFATSEELQQHNSKTHYDNIDDAGGEEYKDFVALDDETLESQHSESKPPAPKANTLEKVPEKDEEVVEKGISSINCDICCFSIDKAFMPEHKEIHESFNVLCSTCQMKFPTAYDFIKHNREAHHRFKNTCIRFFCRICNESLPTPESLQEHHKVCEPRAPCKYCDRIFNESELQQHMKKEHPDKILENEEVVELQCPQCKVVFTDKKQFMDHTHEPSEEIDPKASIYRCDLCPKTSCSLPSISLHRKWHENHRCPECNGKFETSYAFCRHVRRVHEINMTFTKTASQLRPKKLCKTRIIHPEQDSYTCNSCDMKFKTSAARLSHQRTHAIATQYTDHTCDYCQRNFRYRSALIRHMRCHMTKYECETCFKKFCNHHNLIIHQKRQADLTCPKCSMEFTDFCSFTAHLKIVHEIRIPVNGKFSCEQCSKRFPKLRLLRDHQNIHSRKEPYRCETCDKTFRTYAAKWLHEQRHKRDAYVCDYCQNSYQTKQNLSRHMQLHLPPELWRYECKICQAKFKRPANLQDHMRSHSQNQRVYECDICKAQYRHKDSMLRHRKRRHESA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -