Aalt016819.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aleiodes alternator
Gene Symbol
-
Assembly
GCA_963921955.1
Location
OY998108.1:5149461-5155946[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 43 6.7 8.7e+02 1.4 0.0 1 16 54 69 54 71 0.88
2 43 0.017 2.2 9.5 3.0 2 23 141 163 140 163 0.94
3 43 0.027 3.5 8.9 3.3 1 23 246 268 246 268 0.97
4 43 0.013 1.7 9.9 0.4 1 23 274 296 274 296 0.96
5 43 5.4e-05 0.0069 17.4 2.3 1 23 302 324 302 324 0.97
6 43 4.1e-06 0.00053 20.9 3.0 1 23 332 354 332 354 0.98
7 43 0.0004 0.052 14.7 0.6 1 23 360 382 360 382 0.98
8 43 0.00015 0.02 16.0 0.1 2 23 424 446 423 446 0.96
9 43 0.12 15 6.9 0.1 3 23 452 473 450 473 0.90
10 43 0.0092 1.2 10.4 1.8 1 23 587 609 587 609 0.98
11 43 0.00012 0.015 16.4 3.7 1 23 617 639 617 639 0.98
12 43 2.8e-06 0.00037 21.4 2.0 1 23 647 669 647 669 0.99
13 43 0.0094 1.2 10.4 5.0 1 20 675 694 675 697 0.94
14 43 0.0043 0.55 11.4 0.5 3 23 768 789 766 789 0.94
15 43 0.1 13 7.1 2.7 3 23 875 896 874 897 0.94
16 43 0.011 1.4 10.1 0.7 1 21 906 926 906 927 0.94
17 43 0.0014 0.18 12.9 1.0 3 23 934 954 933 954 0.96
18 43 0.0095 1.2 10.3 0.5 2 20 968 986 967 988 0.93
19 43 0.15 19 6.6 1.1 1 23 1000 1022 1000 1022 0.96
20 43 0.0053 0.69 11.1 1.3 1 23 1025 1048 1025 1048 0.95
21 43 0.00073 0.094 13.8 0.8 1 23 1079 1101 1079 1101 0.97
22 43 0.0014 0.17 13.0 6.3 1 21 1110 1130 1110 1132 0.95
23 43 4e-06 0.00051 21.0 2.5 1 23 1140 1162 1140 1162 0.98
24 43 0.054 7 8.0 3.9 1 23 1168 1190 1168 1190 0.95
25 43 0.0063 0.81 10.9 1.2 3 23 1256 1277 1254 1277 0.93
26 43 0.016 2.1 9.6 0.3 2 23 1357 1379 1356 1379 0.94
27 43 2.6 3.4e+02 2.6 0.1 1 20 1389 1408 1389 1409 0.93
28 43 0.00024 0.031 15.4 0.6 2 23 1416 1438 1415 1438 0.97
29 43 0.0034 0.44 11.7 0.8 2 19 1449 1466 1448 1468 0.94
30 43 0.00045 0.058 14.5 0.3 1 23 1506 1528 1506 1528 0.99
31 43 0.00014 0.018 16.1 0.3 2 23 1532 1554 1532 1554 0.95
32 43 0.00013 0.016 16.3 0.9 1 23 1567 1589 1567 1589 0.98
33 43 0.0011 0.14 13.3 6.6 1 23 1595 1617 1595 1617 0.97
34 43 1.4e-05 0.0018 19.2 2.8 1 23 1625 1647 1625 1647 0.98
35 43 0.5 65 4.9 2.7 1 20 1653 1672 1653 1675 0.94
36 43 0.064 8.2 7.7 0.1 2 23 1717 1739 1717 1739 0.95
37 43 0.0074 0.95 10.7 1.3 2 23 1744 1766 1743 1766 0.94
38 43 0.0017 0.22 12.7 0.1 2 23 1822 1844 1821 1844 0.90
39 43 0.012 1.6 10.0 5.1 3 23 1934 1955 1932 1955 0.94
40 43 0.019 2.5 9.4 0.4 1 20 1965 1984 1965 1985 0.94
41 43 2.1 2.7e+02 3.0 5.9 1 23 1991 2014 1991 2015 0.93
42 43 0.001 0.13 13.4 1.8 1 23 2027 2049 2027 2049 0.97
43 43 0.025 3.3 9.0 2.5 1 23 2057 2080 2057 2080 0.98

Sequence Information

Coding Sequence
atggaggcttctaaacaattgaaaatctgCCGATTGTGCGCAACTAATGGGCCCAATTTTCGTGCTATTTTTAATGgccaaaatgaaaaaaatgagataggcgaaaaaatatcaaaatgttTGCCGATATTGATCAGTTCAGACGACGAATTGCCCGGTCACATATGTCCGATGTGCCTACGCTCTCTGAATACGAGTTACAAGCTTCTGATGAAGGTCATAGAGACTGATGGAAAACTGCGGCAGCAATTGTTACAGTCTCGTATCAACAAAAATCAACAAGATTGTGAGCCAACATCCCACAATGCAACTGgtgaagctgaaaaaaatgatccagGGACTTGtggattttatgaaataaattttgtcgATACTGGTGCATTCGCCAGTAACATGGGAACAGTCCATCAATCTCTATTGGTCTGCAATCTTTGCCACAATTCATTCGACAATGCTGCTGAATTACGCCAGCACAAGCACAAGACGCAcgataatattgataatacTGGTGGAGCAGACTGCCACGATTCTGCAGTTGTTGAGATAAAGGATGAGGGGATATTAGTGTCTCAAGACAGCAATATCGAGTCATCTGCTTCAAAGGAAACAACAGGAAAAACAATTTCAGAGGAAATGGACGATATAATTGATGATGACGTCGTCAGTGTTGATAGTGCAACTTCCAATAAATCGCTTCCGGATGCAAAGGCTTTTGGAGTACGAGGTGAAAGAAAATTCGCTTGCAAATATTGCCCTcggaaattcttgagaataaGACACTATGAGGACCATCAGAATACACATTCTCGTAAAGAGCCGTATAGTTGTGTAACTTGTCCTAAAAGATTCAGAACATATGCTGCTCGTTGGATTCACGAGCAGAGCCACAAGGAGAAGAGAGAATATATTTGTGATCTTTGCCAGCGAAGTTACAAGTACAAGCGGCTTTTAAAAAGACACATGCTTAATCACTTGCCACCAGAGGAATGGGACTTTGAATGTGAAATATGTAAATTCAAGTTCAAGAGGTCGACGTACTTGAAGCAACACATGAGAGTACATTCAGCGGATAATCCGCACAAATGTGACATTTGTGGTGCTGCATATGGTCGTGAAGGTGACATGCAAAGACACAGAAAACGTCATCTAGTTGCAgagagtgacaaaaaaaagaagaaacaatcCTCGACGTCAAGCGATAAGGATAAACGAATTCGTAAGTTGAAATCAGATAAAGCATCTGATGACATTGCCAAGAGTCAGCCAATAGTATGCAGCTTATGTGGAACGAATTTCAGCGATGCTGATACATTCAGCAGTCATATGGAGACGATTCATCAATCCAAGTGGGTCTGCATTATTTGCCAAAGTTCGTTCGCAACATCTGATGCATTAGTGCAGCACAAACGCGAGAAACATTCTGATGATATTGATGATGCTGATGGAAAAGACTGTCAAGATTTTGGAGCTATCAAGATGAAGGAAGAGAGGAAATCAATCTCTGAAGACTGCGAGGAACCTGCTTCACTGATTGATCCACAGTCCTCTCGGGAAATTGGAGGAAGTCATCTAGTTCAGGATGAAGATGCTGGAGCTCTTCAAGTGAAGAAAGAGAGGATATCAGTGTCTGAAGACTGCGAGGAACCTGCTTCACTTGCTGACCAACAACCTTCCCGGAACCttcgaaaaagaaaactaGTGGAAGATCATCAGAATGTCCAAAATTTCCAGTTAATTCCACAGTCTTCGGTGGGCGAGTATATTTGCGAGACTTGTCACAGAAAATTCAAGACGCTTGCTGCTAGATCGGGTCATCAGAGGATCCATGGCCGAGTGCACCATCATTACTACACTTGTGATTATtgcctgaaaaaatttacacgtAGATGCAGTTTGGTCAGGCACATAATGGGTCACTTGGGGCCACCAGATGGACTATTCAAATGTGAAATATGTGGATGTTCATTCAAAGGTGTGagccaattgaaaaatcacatgAAAGTACATACAGAGAAACGAATACACGAGTGTGACGTCTGCGGTATCAGGTTTCGACGTAAGCATGACATGTTGAGGCACAGAAGTTGTCACAGAGATAAAGAGATTAATAGGAAACAACAGCAACAATCGTCGCAGTCGAATGACGATGATGATCAACAAAATTCTGAACAGAAATCTCAGGATTCATCTGATGAAGCTGAAAAGGGTGAATCACTGATGTGTGGACTATCCGAAATAAGTTTCGTTGATGTCAGTACATTCGATAGTCCCATTGAAACATTTGATCAATCAAAATTGGCCTGTAATCTttgcgaaaattcatttgcaaCTTCTGAAGAGTTACGGCAGCACAAATCCAAGACACATTACAATAATATTGATGATGCTGGTGGAGAAGAATACAAagattttgtagctcttgatgATGAAACATTAGAATCTCAACACTCTGAAAGCAAACCACCTGCTCCAAAGGAAAAGACATCAGAAAAAGTCCCTGAAAAAGCCGAAGAAGTGGTTGAGGAGGGAATCAGCAGTGTTAACTGTGACATCTGCTgcttttcaattgataaaGCCTTTATGCCtgatcacaaaaaaatacatgaaccATTCAAGGTATTCTGCAGCACTTGTCGGATGAAATTTCCCACCGCCTATGACTTCATCAAACACAACCGTGAGACCCATCATCGTTTTAAGAACACATGCATCagatttttctgcagaaattGCAACAGATCTCTGTCGACTCCAGAGGCACTCAAAGAGCATCACAAAGTGTGTGAGCCACGTGCCCCTTGCAAGTACTGCGaccaaattttcaataaatccgAAATAAAGCAGCATATGAAGAAAGAGCATCCTGACAAAATTCTGGAGAATGAGGAAGTCGTTGAATTACAATGTCCTCAATGTAAAGTAGTTTTTACTGATAAAAAACTATTTATGGATCATACTCATGAACCCAGTGAAGAGATCGATCCAAAGTCATCAATTTATAGATGTGATCTATGCCCAAAGACATCATGCAGTCTTCCAAGTATTCTATTACACAGGAAATGGCATGAAAATCACAGATGTCCAGAGTGcaatggaaaattcgaaactTCTCGTGCATTTAGCAGACATGTTCAGCAAGTacataaaataaatatgaccTCCAACGAAACTGCTCCTATACTACGCCCCAGAAAGCTCCGTAAAAGGCGTATAATCCATCCTGAACAAGACTTATATGCTTGTAACAGTTgtgacaaaaaatttaaaaccaGTGCTGCTAGATTGTCCCACCAACGTGCTCATGGTATAGCAACACAGTACACTAATCACACTTGCGATTATTGCCAGCAAAACTTCAGATATAAATCCACCTTAATAAGACACATACGTTGTCACATGCCACGAGAAACCTGGAAATTCGAGTGTACAGTATGTACACGTAAGTTCTCACGTGAATTCAATCTGAAAAGCCACATGAGACTACATTCAAATGGTGATGCTCATGACTGTGACATCTGCGGTGCTAGATATCGACGTAGATGTGACATGTTGCAGCACAGAAATTATCACGAAATTGTAAAGATCAATAGAAGAAAACGGCAGCAATTGTCAAGATCATGTGTCAAGGAGGATCCACAAGATTATGAGCCAGCAtctgataattcaattgacgTTGAAACACTTGAACCATTGTGTGAAATAAGTTTCGTTGATGCTGGTGCCTTTGCCGGTCCAATAGAACCACCTCATCAATCAAAATGGGACTGTAATCACTGTTCAAATTCATTTGCAACTTCTGATGAATTAGTGCAGCACAAGGACAAGACACACAccaataatattgataattccGGAATCATTGAGATCAAAGAAGAGGTAATATCAGAATCTCAAGGCTCCCATGTTGAAATACTTGATCGAAAGGAACCGATAAAAACCGCAAATTCAGAGAAAACAGTACATAGAAATAGAAGGAGTATGCCTAACAATGGTTGTCTCGTTTGCCATGCTTCAGTTGAGGAAGCCTTTATGCCTGAAcacaaaaaaatgcatgaacCCTTTGAAGTCTACTGTGACACATGTCAATCCCAATTTCCAACAGCTTATGATCTAGTAAGACACAAACGTGATACTCACAATATGTTTACCAAATCTGTAATAagatttttctgcagaaattGCAATAGAGGTCTGACAAATATAAAAGCTTTTGAAGCAcatgtaattttttgtaaattacgAAACAAGTGCAAATACTGTGACAAAGCATTTAATTTGCCGGACTTGTTAGATATGCATCAGAAAAAAGAACATGGtgacaaaataaaagaattggaTAAATTACAGTGTCCTCAATGTAACGAAGTATTTACTGATAAAAAGCTCTTTATGAGTCATTCTCACGAATCTAGTGTCAGGAAAGAGGAGAAGTACGAATGTTCCCAgagtaatcaattttttccatcttcaGTCAGTTTAAAAGCACATTCTGATGTTCAtcgtaaatcatcaaaatatcaatgtAAAGTGTGCCCTGACTCATTCTATAGTCCTACAACTCTGGAAATACACGAGAGACGTCATCAAAATCGTACATGTACAAAGTGCGatcaagtttttaaaaatctttatGCATTGAGTGCACATTTGAAGGAAGTACATAGCGTAacatttccgaaaaaaaaacctgagaaGACATTTGTCTGCTCATACTGTCCTCAGAGATTTCGAGTCAAGTACCGATTAGAACAGCATCTCAATATACATACACGCAAACATCTGCATACTTGCACACTTTGCGACAGAAAATTTAACTTCAAACGTAGTCTATTGAGACACATGCATGTCCATTTGCCCCGTGAAAATTGGATATTCGAATGTGATCTGTGTAAGCTTAAATTCAAGAGTCGTGATCATTTGAAGAAACACATGGCAATACATTCGAGGGATTATGCTTACAAATGTGACATCTGTGGTGCTGCATATCTTCGTGAATGTAATTTGGTGAGACACAAGCTTTGTCATTCAGAGAATGCAGAAACTGATGGGGGACAACGAGAACAATCATCACCATTACTAGACGATGATCAACAAAATTCTGGATTAAGATCTGATGATTCATCTGGTGAAATTAAGGAGACTGAACCAGTATGTGGATTCTGCGAAATAACTTTTGCTGATGTTAGTACATTCGACAGTCACATGGAGCGACTCCATCAATCAAAATGGGTCTGCAATCTCTGTCAAAATTCATTCGCAACGTCTGACGAATTGCTGCAGCACAAACACAAGCAACACTATGATAATGTCGATGAAGCTGTTGAAGAATGCGCCGATTCTGTAGCTATTGAGGTGAAGGAAGAGACAATATCAGTGCCTGAGCACTCAGATCCTCTGCCATCTGCtccaaaaaaacccaaaagaAAGTCTTCTGAAAAGAAGACACTGCCTCAATCAGAATGGATCTGCGACCAGTGTCAGAAGTCATTTTCAGCATCTGAACAGTTACTTCAACATATAGTCGAGGTCCATTGCAGCAGTATTGATGGTGCTGGAGAAGAAGAATGCCATGATTCCAAACCCATTGAGATAAAAGAAGAGATAATCCTAGTATCCGAACATTCCGATACAGAATCGATTTCTGTGGAGGAACCTAGAAGAGAAGTTTCCACTTCCAAGCAGATTGAAGAGGAAGTAGAGGCGGAAGAGATTATTATTGATTGCACGATTTGCCATGTTCCAGTCGAGAAATATTTTATGCCTGAGCACCAAAAAATCCATGAACCATTCGAGCTCTTCTGCACAAAGTGTCACTGCAAATTTCCAACTGCTTATGACCTCATCAAACACAAGCGTGacactcattttctttttaatggtACAATCATCAGATTTTACTGCAGAAATTGCAACAGATCGATATCGGATTCGGAGACACTTAAGGCACATGAAAAGTGCGTTAAGGCACAGTACAACTGCAAATACTGCAGTGAAACATTCAACTGGTTGCAACAGCTGCGGCTTCATCTGCATCACGTGCATCATGAACGGATGCTGGAGGACAAGGAGGTCAAGATCTTTGAATGTAATCGATGCGGTAAAGTTTACACTGATAGAAGACGCTTCAGGCTGCACACTTCAGTACATCGTGCCAGGGACAAAGGAAGATACAGATGCAAACAGTGTAACGTATACTATTCCAAAGCCATGGACTTGGATCATCATCGTCAAACTGTCCACAAAAACGTGCGATCATAA
Protein Sequence
MEASKQLKICRLCATNGPNFRAIFNGQNEKNEIGEKISKCLPILISSDDELPGHICPMCLRSLNTSYKLLMKVIETDGKLRQQLLQSRINKNQQDCEPTSHNATGEAEKNDPGTCGFYEINFVDTGAFASNMGTVHQSLLVCNLCHNSFDNAAELRQHKHKTHDNIDNTGGADCHDSAVVEIKDEGILVSQDSNIESSASKETTGKTISEEMDDIIDDDVVSVDSATSNKSLPDAKAFGVRGERKFACKYCPRKFLRIRHYEDHQNTHSRKEPYSCVTCPKRFRTYAARWIHEQSHKEKREYICDLCQRSYKYKRLLKRHMLNHLPPEEWDFECEICKFKFKRSTYLKQHMRVHSADNPHKCDICGAAYGREGDMQRHRKRHLVAESDKKKKKQSSTSSDKDKRIRKLKSDKASDDIAKSQPIVCSLCGTNFSDADTFSSHMETIHQSKWVCIICQSSFATSDALVQHKREKHSDDIDDADGKDCQDFGAIKMKEERKSISEDCEEPASLIDPQSSREIGGSHLVQDEDAGALQVKKERISVSEDCEEPASLADQQPSRNLRKRKLVEDHQNVQNFQLIPQSSVGEYICETCHRKFKTLAARSGHQRIHGRVHHHYYTCDYCLKKFTRRCSLVRHIMGHLGPPDGLFKCEICGCSFKGVSQLKNHMKVHTEKRIHECDVCGIRFRRKHDMLRHRSCHRDKEINRKQQQQSSQSNDDDDQQNSEQKSQDSSDEAEKGESLMCGLSEISFVDVSTFDSPIETFDQSKLACNLCENSFATSEELRQHKSKTHYNNIDDAGGEEYKDFVALDDETLESQHSESKPPAPKEKTSEKVPEKAEEVVEEGISSVNCDICCFSIDKAFMPDHKKIHEPFKVFCSTCRMKFPTAYDFIKHNRETHHRFKNTCIRFFCRNCNRSLSTPEALKEHHKVCEPRAPCKYCDQIFNKSEIKQHMKKEHPDKILENEEVVELQCPQCKVVFTDKKLFMDHTHEPSEEIDPKSSIYRCDLCPKTSCSLPSILLHRKWHENHRCPECNGKFETSRAFSRHVQQVHKINMTSNETAPILRPRKLRKRRIIHPEQDLYACNSCDKKFKTSAARLSHQRAHGIATQYTNHTCDYCQQNFRYKSTLIRHIRCHMPRETWKFECTVCTRKFSREFNLKSHMRLHSNGDAHDCDICGARYRRRCDMLQHRNYHEIVKINRRKRQQLSRSCVKEDPQDYEPASDNSIDVETLEPLCEISFVDAGAFAGPIEPPHQSKWDCNHCSNSFATSDELVQHKDKTHTNNIDNSGIIEIKEEVISESQGSHVEILDRKEPIKTANSEKTVHRNRRSMPNNGCLVCHASVEEAFMPEHKKMHEPFEVYCDTCQSQFPTAYDLVRHKRDTHNMFTKSVIRFFCRNCNRGLTNIKAFEAHVIFCKLRNKCKYCDKAFNLPDLLDMHQKKEHGDKIKELDKLQCPQCNEVFTDKKLFMSHSHESSVRKEEKYECSQSNQFFPSSVSLKAHSDVHRKSSKYQCKVCPDSFYSPTTLEIHERRHQNRTCTKCDQVFKNLYALSAHLKEVHSVTFPKKKPEKTFVCSYCPQRFRVKYRLEQHLNIHTRKHLHTCTLCDRKFNFKRSLLRHMHVHLPRENWIFECDLCKLKFKSRDHLKKHMAIHSRDYAYKCDICGAAYLRECNLVRHKLCHSENAETDGGQREQSSPLLDDDQQNSGLRSDDSSGEIKETEPVCGFCEITFADVSTFDSHMERLHQSKWVCNLCQNSFATSDELLQHKHKQHYDNVDEAVEECADSVAIEVKEETISVPEHSDPLPSAPKKPKRKSSEKKTLPQSEWICDQCQKSFSASEQLLQHIVEVHCSSIDGAGEEECHDSKPIEIKEEIILVSEHSDTESISVEEPRREVSTSKQIEEEVEAEEIIIDCTICHVPVEKYFMPEHQKIHEPFELFCTKCHCKFPTAYDLIKHKRDTHFLFNGTIIRFYCRNCNRSISDSETLKAHEKCVKAQYNCKYCSETFNWLQQLRLHLHHVHHERMLEDKEVKIFECNRCGKVYTDRRRFRLHTSVHRARDKGRYRCKQCNVYYSKAMDLDHHRQTVHKNVRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-