Aalt018213.1
Basic Information
- Insect
- Aleiodes alternator
- Gene Symbol
- ttk
- Assembly
- GCA_963921955.1
- Location
- OY998109.1:7082057-7083899[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-09 3.7e-06 27.2 0.1 2 41 336 376 335 380 0.91
Sequence Information
- Coding Sequence
- ATGGAGGCATCATCATCGGAGCAACAATTTTGTTTACGCTGGAACAATCACAAGAGTAATTTATTaactgaattcaatgaattactaCAAAATGAGGCATTTACAGATGTAACACTTGTAGTTGGAGATGGACCATCATTTATAAGATGCCACAAAATGGTATTGGCAGCATGCTCAACATACTTTCAAGCATTATTCATACAATTACCATCAAATGATCAGCATCCAGTAATAGTCTTAAAAGACGTTAAATACAGTGAAATGAAAGCAATACTTGAGTACATGTATCAGGGTGAAGTTAGTATTGCACAAAATCAACTGAGTGAATTATTAAAAGTTGCTGATGCACTCAGAGTTAAAGGTTTAGTTGATGATAAACCATTGCGTCCACGTGGTACATCAATGTCACCACCTCCAGCAATAAGTACGAGTACAGAAAAAAGTGCATACAGTAATGACAGTATAAACAATGACATATCATCACCGCCTCATTCAACAAGTTCATCACCTTATTACTCTTATTATGGTAAATCACCTAGTACAACACCCCAGCAACAATTAACAGCTCCACCAGTTTGGAATCATTTCTCACGTCTATCATTAGCAGCACAAAATGTCATGAATACACCAATGACACCAACAGGAGCACCATTATTCTCAAGAATATTTGATGCTGATGAGGCTAATATACgcaaaaaaattggcattaTGGGTAATAGAGATACACCAATACTGAGAACTGTACTTGGTGGACGTGAACATGCTGATAGCTCACAAGGAATTCCAGTGATTCATGGAGATAATATGGAATTACACAGAAGCAACAGTAATGGCTCGGCTAATGATGGTCATGATGGTAGAAGAAGTAGTTTGGATTTGTCTGGTAATAGTGGACACAGTCCGTATCCAACTGAGGCATCAATGGAGGATGATGATAAGAAGTACTCGTCAATGAGTGGACAAAATAGGAAACACAAAGAGTGGAAACGATACAAGCAATATTCAAAGGAGGACATGCAACAGGCAATTGAAGCTGTTAAAACACAAAAAATGACTGCACTTAAGGCAGCTGGTATGTTTCGTATACCATCACGTACACTATATGATAAAGTTAAGAAAATGGGGATTATAACACAGCGAAATGGCCGACGCCATTTGTCTAACAGTGGTGCTCATTTTCCACATGGTATTGGTGGCAATAGAAATGGCAGTATTTACAGTGGTATTAcagataatgataatgataatgaacaTCATAGACAAGATAGTATAATGGAGAGTTCATCTGCATTACTTGAATTAGCTTATGGTAATATGCGTGAACATCAACAAATTGATGATGAAACAATGAGTACTGATACTATTAAACGTTCATCAAGTCCTGATGATGAAtcaaataatgatgatgaacaAGATAATGATGATCGTGTACAGGATTTATCGGTTAAACGTAAAAATGTTATAGTACCACCGTTAAATCCAAttattaaagaagaaaaaccgGATGTAACACAGAACtga
- Protein Sequence
- MEASSSEQQFCLRWNNHKSNLLTEFNELLQNEAFTDVTLVVGDGPSFIRCHKMVLAACSTYFQALFIQLPSNDQHPVIVLKDVKYSEMKAILEYMYQGEVSIAQNQLSELLKVADALRVKGLVDDKPLRPRGTSMSPPPAISTSTEKSAYSNDSINNDISSPPHSTSSSPYYSYYGKSPSTTPQQQLTAPPVWNHFSRLSLAAQNVMNTPMTPTGAPLFSRIFDADEANIRKKIGIMGNRDTPILRTVLGGREHADSSQGIPVIHGDNMELHRSNSNGSANDGHDGRRSSLDLSGNSGHSPYPTEASMEDDDKKYSSMSGQNRKHKEWKRYKQYSKEDMQQAIEAVKTQKMTALKAAGMFRIPSRTLYDKVKKMGIITQRNGRRHLSNSGAHFPHGIGGNRNGSIYSGITDNDNDNEHHRQDSIMESSSALLELAYGNMREHQQIDDETMSTDTIKRSSSPDDESNNDDEQDNDDRVQDLSVKRKNVIVPPLNPIIKEEKPDVTQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00048062;
- 90% Identity
- iTF_00048062;
- 80% Identity
- iTF_00046284;