Aalt001688.1
Basic Information
- Insect
- Aleiodes alternator
- Gene Symbol
- -
- Assembly
- GCA_963921955.1
- Location
- OY998097.1:16919012-16920740[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-10 1.1e-07 32.1 0.0 1 35 22 55 22 61 0.92
Sequence Information
- Coding Sequence
- ATGCTGAAAGTTCAGAAATTggTAAAAACGAAGGTGCACAAGAAGCAGAGCTGCACCGGTTACACCGAGGAATCTCTCCAAGAAGCTTTAGCAGCAGTCAAGCGAGGAGTACCCGTAGCCCGTGCCTCCCGCGACTTTGGAATCCCGAAATCGActcttctctacaaaaaaatgggCATCCTCAAGCCCACCATCTGCAGAAGAGGTCCAGATCCAGTCCTCGGTCCAGAAAACGAGAAATCCCTAGTAGAATGGATCAACCGAAGGGTCGACAACAGACTTCCCATAACGAAGGACCAGTTACTGGACAGTGTCCGGATATTCTTGAACCGTATAGGCAAAAAAACAGTCTTCAAGAACAACCGCCCAGGAAGGCACTGGTACGAGGCTTTCCAAGAACGACACCATCTCTCCGGAAAAATAACGCATCTTTCCAATGCAAAAACAACGGAAATCAAACTAAGAGAATGGTTTGCGGAATTGCGCTCGTATCTAGAAGTACGTGCTCTCGTTGATGTCGACCCATCCCGTGTCTTTAACTGCGACGAAATGGCTCTGATACTGAATCCAAAGGACGAAAATACCTTGATCCATCCTGGCGACAAGGTGGTCCACAGTTTTGCTAGTGGAGACGCGAAAGAGTGCATCAGTACGCTGATGTGCGGAAGTgcgaatggaaaattattgccACCTTTGGTCATGTTCTCGTGCTCACGTCTTCCAACGAATATTGTCAAGTCTTTGCCGAGCAATTGGGCTATTGGGAAGACAGATAATGGCTGGATCAATGGAGAGTCCTTTTACGACTGGATCAAGAACGTTTTTCATCAGTGGCTCATCAATAATCGAATCGAACTTCCGATTTTGCTCTATATCGATGGTTTTAAATCGTATTTGACGCTGGAATTGACGGAGTACTGCAGTGGCATTGGCATCATCATCGTCTCTTTACCTTCGAACTCGAGTAATCTACTGCAGCCAATAGATTACGGGGTTTTCCAGGCACTCAAGTCCACGTGGCTCAAAGCGGTCGAGGACTGGAAGATTCAGAATAGTTATGTGAAAGTTAAGCGGGAAAACTTTTGTCCATTACTAAAAAGTGCGGTTGAAGCACTTGATACCAAAGAATTACTGTCCACtgcattcatgaaaattggatTACTGCCTTTTTCGGTGGACATTAATTATAAGGAGTTCTTGGGGAAGAGTGGAGGACAGGATAATGTACTTGAGGTCTCGGTTGATCCGGAAATCGTGGAGGGGGTCAGTGAGTCCATGGAGGCTTTGGAGGTGATTGAGGAAAATATTGGAAGTGAAATTATGGAATTGTTTAGGGCAGTTGGAGCTGAAGATAGGTGGACTGGAGCAATTCAACATCAGAGCCTTTTTTATTTGTGGCAGAAGATTAAGAGCAAGGgtattgttgataatttaacgaggtattggtga
- Protein Sequence
- MLKVQKLVKTKVHKKQSCTGYTEESLQEALAAVKRGVPVARASRDFGIPKSTLLYKKMGILKPTICRRGPDPVLGPENEKSLVEWINRRVDNRLPITKDQLLDSVRIFLNRIGKKTVFKNNRPGRHWYEAFQERHHLSGKITHLSNAKTTEIKLREWFAELRSYLEVRALVDVDPSRVFNCDEMALILNPKDENTLIHPGDKVVHSFASGDAKECISTLMCGSANGKLLPPLVMFSCSRLPTNIVKSLPSNWAIGKTDNGWINGESFYDWIKNVFHQWLINNRIELPILLYIDGFKSYLTLELTEYCSGIGIIIVSLPSNSSNLLQPIDYGVFQALKSTWLKAVEDWKIQNSYVKVKRENFCPLLKSAVEALDTKELLSTAFMKIGLLPFSVDINYKEFLGKSGGQDNVLEVSVDPEIVEGVSESMEALEVIEENIGSEIMELFRAVGAEDRWTGAIQHQSLFYLWQKIKSKGIVDNLTRYW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00046886; iTF_00047886;
- 90% Identity
- iTF_00046886;
- 80% Identity
- -