Basic Information

Insect: Aleiodes alternator
Gene Symbol: clz9_1
Assembly: GCA_963921955.1
Location: OY998114.1:3299692-3302453[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.7e-11 5.6e-08 33.0 0.0 2 42 20 60 19 63 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.7e-11	5.6e-08	33.0	0.0	2	42	20	60	19	63	0.89

Sequence Information

Coding Sequence: ATGACAGCAGAATCGAAGGCAGAGCAAAACACTTCTCGTCAACGATTCAAGTATTCACCGAAAGATATGGAACAAGCTCTGGATGCTGTGAGGAATGGTGGATTGAAAGCTAGCCAGGCTGCTGAAATTTACCATGTCCCCAAATCCACATTGAGCAATAAactaaatggaaaatttccagaGAAACGAAAGATGGGACCCAAATCGATATTGTCTGATGAAGAGGAGGCAGTTCTTGAACGTTGGATCCTGGGGAAGGCAGCAGTGGGTTTCCCTATGCACCCTGATGAGGTGAGAGATGCAGTGCAACATGTGTTAAAGGAAGCACCTCGAGACAATCCCTTTGAAGACGATCGACCTGGAACGAAGTGGATGACACTTTTCCTAAAAAGACACCcagaaattaagaagaaaaataccgaggtcatttcgaaggctCGTGCATGTGTCACAGAAGAACGGATTCGACAGTGGTTTGAAGACGTTAAGATTTTCTtacgtgaaaataatttcttggaTGTGTTGGATAGACCTCACAGCATTTTTAATGGTGATGAAACTGGAGTTCAAACCTGTCCTAAGTCTGGCTTAGTATTGGGGCCAAAAtctgaaaagaatttttacgaGATTGCCAATGGAAGTGAGAAAGAATCCATCACAGTTCTATGCACGTTCTCTGCTGCAGGTGAAGCAGTACCACCCATGATCGTTTTTCCGTACAAAAGAATTCCAGCACATATAGCTGAAACAGTTCCTGACGATTGGGCCATTGGCCGATCTGATAGTGGTTGGATGGTCCAGGCGacgttttttgaatatattgcAAATGTTTTCTATCCCTGGTGTGTGGAAAATCAGGTTGTGTTTCctgtaatttattttcttgatgGACACAAATCACATATTAGCCCAGAACTACGTGAATTTTGCATACAGCATGATATTATTTTGTATTGCCTGGCACCTAATTCAACTCATATAAAGCAGCCGTGTGATGTTGGAGTTTTTAAGCCTCTTAAAACGAATTGGAAGATTGTCTCGAGGGAACATAAGCAACTGACTCAGAAAGCAGTGACGAAATCAAATTTCACGCCATTGTTCAAGAAAGCCTTCGATCGGTTAATGCTCAATAAGACAATCATTCAGAATGCATTTAGAGCTAGTGGGCTGTACCCGTTTGATGCTGATGCTGTGGATTACAGTAAATGCATTTCAACGAGACGTGCAAACTTCTTTAAAGAGCCTGATAACTTTTCACCTTCACTTCACGATTTTACTGTAACAAAGGAAATGATTGAGTATTTCATTGGACCCAAAAGAACTGAATCCTATGTGGAAAGGAAGAACATGAATGTCAACCAAAACTCAAGCAATCACTTGTTCTTATTGTGGAATCTCTGTTCAAATCGTCTGGAAGGGTTATCAGAGTGTGCTGACCAACTACCTCCCGAAACTGCTGATATTCAGAGTGAAGTCCATGACTTCCCTACGCATCAAACTGCAGCCACTTCACTCATTGAAGATAATACTTCTccaatttcttcttcaatcaCTTCTCCTCCAGAGCAAGCCTCTCAAAATCCATTAATTCAAGCTAGTACATCTGATACAACTGAACATTCTCCAGAGCCACCAATTGTTGATGCTTCTTGTCCCTCTGAAGAATCTCCAGATCCACCAATCGAGGATTATGTGTCTTGTCCAGTTGGAGAGTCTCCACATTTCAGTGCTGGTCTCGATGAAGATACACCATTGATATTTGACGAGAATGATTTGTCTTTTCCTGTAGAAGAGTCAATAGACCCTCGCACTGGTTTCCCCATGTACAATGTTGTTTGTGATGAACATGAAGAAATATCTACAATTGATGTTTTTCCCATTTCCAATGATTCTCATGGTCAGCCAGTCAGTTCGCAcggagaaaataataattacattatTATTGATGATGGAAGtgatgaaaatggaaatttctctGGCCCTGATACTAGTAAGGTGATGATTAACAAAAACAATATCAACATTGTTGACTCTGTGAACAATAATCTAGAGACCACTGAGTTTTCGCACCAGACAGAGACATCGACTATTGTAGAACAGGAAGAATCAAGACCTGATGAGCCAAAACCGTCACGTGGTACGAGAAGGAACCAATCGGTATTGGATTTGTGGAATAAGCATACATCGTGGCCCGATCAAAACCCTacaaaatcaacaaaatcaaaaaaaaataaccagcAACCAATGCCCTTCGCTATAACTTCTAAGCAATGGGGAGAATACCAcgataagaaaaagaaagaacagcttgaaaaagaggaagaaactGCAAACAGAGTTAATATGAGacgattaaaaaaagaagccatTGAAACagagaaacagagaaaaaaaaatgaaaaggaagaGAAAGCAAAGATGAAGGGAGTTGCAGCCACAGAGAGGACCAAAGTAAAAAAAGAGCGAGCTccgaaattgaagaaagagaGTGATTCAGATcaaaaactggagaaaacTGGCGAAAACATCACACAAGTTAAACCAAAGAAAAGAGGTAGACCTAAGAAGATGACGGAAAGCGATAgctaa
Protein Sequence: MTAESKAEQNTSRQRFKYSPKDMEQALDAVRNGGLKASQAAEIYHVPKSTLSNKLNGKFPEKRKMGPKSILSDEEEAVLERWILGKAAVGFPMHPDEVRDAVQHVLKEAPRDNPFEDDRPGTKWMTLFLKRHPEIKKKNTEVISKARACVTEERIRQWFEDVKIFLRENNFLDVLDRPHSIFNGDETGVQTCPKSGLVLGPKSEKNFYEIANGSEKESITVLCTFSAAGEAVPPMIVFPYKRIPAHIAETVPDDWAIGRSDSGWMVQATFFEYIANVFYPWCVENQVVFPVIYFLDGHKSHISPELREFCIQHDIILYCLAPNSTHIKQPCDVGVFKPLKTNWKIVSREHKQLTQKAVTKSNFTPLFKKAFDRLMLNKTIIQNAFRASGLYPFDADAVDYSKCISTRRANFFKEPDNFSPSLHDFTVTKEMIEYFIGPKRTESYVERKNMNVNQNSSNHLFLLWNLCSNRLEGLSECADQLPPETADIQSEVHDFPTHQTAATSLIEDNTSPISSSITSPPEQASQNPLIQASTSDTTEHSPEPPIVDASCPSEESPDPPIEDYVSCPVGESPHFSAGLDEDTPLIFDENDLSFPVEESIDPRTGFPMYNVVCDEHEEISTIDVFPISNDSHGQPVSSHGENNNYIIIDDGSDENGNFSGPDTSKVMINKNNINIVDSVNNNLETTEFSHQTETSTIVEQEESRPDEPKPSRGTRRNQSVLDLWNKHTSWPDQNPTKSTKSKKNNQQPMPFAITSKQWGEYHDKKKKEQLEKEEETANRVNMRRLKKEAIETEKQRKKNEKEEKAKMKGVAATERTKVKKERAPKLKKESDSDQKLEKTGENITQVKPKKRGRPKKMTESDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -