Basic Information

Insect: Aleiodes alternator
Gene Symbol: -
Assembly: GCA_963921955.1
Location: OY998107.1:11678914-11681797[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.5e-11 2.5e-08 34.2 0.0 1 37 15 51 15 57 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.5e-11	2.5e-08	34.2	0.0	1	37	15	51	15	57	0.90

Sequence Information

Coding Sequence: ATGGTGTGGAATTATAAAAAGAAGACCAATAGACAAGATTGGTCTGAAGAAACAATGGCTCTTGCTATTTATGCAGTGAAACAAAATGGAATGGGCTACCATAAAGCTGCAAAAACCTATGGTGTCCCCTCCACCACACTTTTTCGGAGGGCGAAAGATTATGATGAGCACCAAGACGTGGAACTTGCTAGCATGAAAgGTTTAGGGAGTGTGCTGCCAGTCTTCAATGCTGCTgaggaaattgaattgatcgattttttgaagcaacaaGAAGTCAGATTACATGGGCTAACAGTGAAAGAGCTTCGGATTTTAGTGTACCAGCTAGCTGAATTAAATCACATCGAACATCCATTTGCTAACGGGATAGCTGGGAAGGACTGGGTGAAGCATTTTTTCACCAGGAATCCTGGCATGAGCTTTCGAAAGCCAGAAGCCACTTGCAGTGCCCGGGCCATGGGCTTCAATCGAGTGGTCGtcggtcattttttcaatttattggaCAATTTGACATCTGAACTCGATTTGGAATCACATCGAATCTTTAATGTAGACGAAATGGGAATAAGCACTGTTCCCAAACATCGGGGACGAATAATCGCTACCAAAGGCAGGAAGCAGGTGGGACAGAGGACATCaggagagagaggagaattaATTACAGTGGAGCTCTGCGTCAATGCTGCTGGTCAATGTTTACCACCACTTTTTGTATTTCCGAGGAAGAATAATACTTCCAGATTTCTAGAGGGTGTAATTGTGGAAGGGTCTTGGTCACTGGCAAGTGGTAACGGTTGGATGCGTGCTGAACATTTTTACAAATGGCTCAAGTGGTTCGTCGACATGGTGGAACCCACTAAGGCTGATCCAGTTGCTCTAATACTCGATGGTAGTGGAATCCACTCTTTCAATCTTGATGCCCTGAAATATGCGAGAAAAAAGAACGTCCACATTTTATGCCTTCCGCCACACACTACACACAGACTACAACCATTGGACGTGAGCTTGATGTGCCCAATTTCAACTAACTACTGGAGTCAAGTGGTAAGTTGGGAACGAAGCCATCCAGCCCAAAATTTACAGATCTACGACGTTGCTTCTTTGTTCTGCAAGGCATTGAATGCAGCAGCAACGAGAACGAACATCAGGAATGGATTCAAGGCGACTGGAATATGGCCAATTGATCGAAATGTCTTCAAAGATGATGATTTCATGCCCGCTGAAGTTACGAATCGTAGGATTTATGAAGACGCTGATAGCCAGCAGGGGAGATCTTCGAGACTTGAGCAATCAAATCTGCCAGGAAATCCAGGTAGTTCGAACTTCGATGATAATGATGGAGATGCCTTGAATCGATCTTTCAATGATGCTCGGTCGACGTTCATTgtagatgaagaaaatgaagacatcCCAATGGAGCCATCAGTGTGTGGCACTCCACCTGCATCATCATCTGGAAATTTCAGTAAAGCATGGATGAATCAGCTCTGGGGAAGATCGCCTTCTTCAAGTTTGTCTGAAGTAGACGATGTTTCATTCAATAACACAGAGTTCTGCGATGTTCCTGAGCGTGAATCAGTGGAATCTGATGATTTGAAAGAACAAGATGAAATACAATTATTCTTGGGCCGCCATGACTCTTTTGACTTCTCACAATTACAAGAGCATCTTCCATCTGTCGAAGGGCACCCTCCAACAGCATCACCCCCTCAAGATCATTGTGCTCTGAACGagaattttccaacaaaaacgAGTTTGGCTCTGAAGATTTTCTACAAATTCATCGGTTTCTTCACATCGCCAATCAGTCTTGAAGAAGATTTAGAACGAATTTATCGAGATCGTAGTATTTTATCAAGGACATCAGCTGCCACTGCAGATCTCTCGCCTCCAGAGCCCTACATATTCCATGAACTTCGACCTTTCGTTGACACATTGAtagataatgataatgatagaaGCTCCGTAGCGAGTTCATTGCAAGAAAGCTTGCTAACACCAAACGAGACAGATGCAGAGGATGATCTCTCAGATCTGATTTTTTATCCTCCAAGAAATGCCGAGGATTATACACGGGGGCCGTTGTTTTACTCGTTATCCTCCGATACTGATACCTCGTTTGCTCATCGTGAAGGAAGCGTTATGCCTCAACCCAGAGCAGAGAGCCCAGAGCCTCAGCCCAGAGCAGAGAGCCCAGAACCTCAGCCCAGAGCAGAGAGCCCAGAGCCTCAGCCCAGAGCAGAGAGCCCAGAGCCTCAGTCCAGTATACACCTGTGTGAAGCAATTCCGGTCCTGCGTAGATCGGAGcgattgagaaaattcagcgATAATGAAGTTCACATTGAGATAGACCATGCTCCAGACTCAGTACCATCTACAAGTAATGGTGGTAACGGCATGAAACTCGGGAAAAAGATTCGTGAACATCGTGGGAGAACTCTAAATTTTCGTCCACAGGACATCATGCCAATTCCAGTAGCGAATGAGGGTCCATTAAGAAAACAACGGAAACGGGGCAAAACGTGTTTGCTCACCAGCAATGAGCACATCGCCAGTTTAGAAAACACTACTACGAGAGCTAAGAGATCTCAAAGATCGTCACCAGTTCCTGCACAGAGAcgcaaacgaaaaaaaaaaaaacaaatagaatTGTCATCTAGTGATGGCAGTGATGGCAGTGATGTGATGAGCCACTCATCTGCACCATCAAGCGACGGTGAACCTTCGCGACGTGTCACAAGGTCATCgacaaaaaaagtttaa
Protein Sequence: MVWNYKKKTNRQDWSEETMALAIYAVKQNGMGYHKAAKTYGVPSTTLFRRAKDYDEHQDVELASMKGLGSVLPVFNAAEEIELIDFLKQQEVRLHGLTVKELRILVYQLAELNHIEHPFANGIAGKDWVKHFFTRNPGMSFRKPEATCSARAMGFNRVVVGHFFNLLDNLTSELDLESHRIFNVDEMGISTVPKHRGRIIATKGRKQVGQRTSGERGELITVELCVNAAGQCLPPLFVFPRKNNTSRFLEGVIVEGSWSLASGNGWMRAEHFYKWLKWFVDMVEPTKADPVALILDGSGIHSFNLDALKYARKKNVHILCLPPHTTHRLQPLDVSLMCPISTNYWSQVVSWERSHPAQNLQIYDVASLFCKALNAAATRTNIRNGFKATGIWPIDRNVFKDDDFMPAEVTNRRIYEDADSQQGRSSRLEQSNLPGNPGSSNFDDNDGDALNRSFNDARSTFIVDEENEDIPMEPSVCGTPPASSSGNFSKAWMNQLWGRSPSSSLSEVDDVSFNNTEFCDVPERESVESDDLKEQDEIQLFLGRHDSFDFSQLQEHLPSVEGHPPTASPPQDHCALNENFPTKTSLALKIFYKFIGFFTSPISLEEDLERIYRDRSILSRTSAATADLSPPEPYIFHELRPFVDTLIDNDNDRSSVASSLQESLLTPNETDAEDDLSDLIFYPPRNAEDYTRGPLFYSLSSDTDTSFAHREGSVMPQPRAESPEPQPRAESPEPQPRAESPEPQPRAESPEPQSSIHLCEAIPVLRRSERLRKFSDNEVHIEIDHAPDSVPSTSNGGNGMKLGKKIREHRGRTLNFRPQDIMPIPVANEGPLRKQRKRGKTCLLTSNEHIASLENTTTRAKRSQRSSPVPAQRRKRKKKKQIELSSSDGSDGSDVMSHSSAPSSDGEPSRRVTRSSTKKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00046059; iTF_00046884;
90% Identity: iTF_00046059;
80% Identity: iTF_00046059;