Basic Information

Gene Symbol
ct
Assembly
GCA_963921955.1
Location
OY998112.1:8980397-8997201[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-27 8.2e-24 84.1 0.0 2 72 497 568 496 573 0.95
2 3 2.5e-32 1.8e-28 99.0 0.0 3 77 908 983 906 985 0.96
3 3 2.8e-30 2e-26 92.4 0.0 3 75 1136 1209 1134 1213 0.95

Sequence Information

Coding Sequence
ATGTGGAAGGCGACTGAAGGAGTTAGAGGGAATAACGAGGATGCAGAAGGGCCAGTGGATTATCGAACACCGATATATCCTACTTACATTCATGCACGATCAAAAACCATTAATCAACTCGTCGACGAGGTATCGAGGTTACAACAGACACTCCAAAGACTCCAGGAGACAAGTGCCCAAGCAACAGCAAGACTAGAGGAGGAACTTGACAATAGAAGACAGCATATAGCAAGATTGGAGAGTAAATTGGACAGACAGAGAgattatgatgaaattaaaagGGAAATAAGTGTATTGAGATCAGTTGATTTGTCACAAATACCAACTGGTGAACCTGGAAAAAGTCTTGAGCATTTATTGATGGAAAGAACAAAGGCATTACAACAGGCAGAAACATTAAAACCACCAAGTACACCAGATGCAATTGGTGGACTAGCCTCACCAATGCAGCGTGCTGCAACTGCCTCTCCCTCTCATGGCAGTGGCGTTGTTGGTGTTGGCACCGGGATAACACCGGTTACCACTCTCGTTTCCACCCAACAGGTGCTCCAAAAACGCTCCACCCCAACACCCACAGTCGGTCAAACGGCTGTAGCAGCCTCAAGTATCCTATTTCCGCCTCCTCTACAAAATGTTGAAACATTTGGCTCATTTCTTGGCGAAGAGATTGTCGCCAATTGGAGGCGATCCCTGGAGCGTTCAATAATGAgccaacaacaacaacaacaacaacaacagccaAATCAACAACAGACATCACAGTCAGGTGTTCTCCAATCTCAACCGACAACAACCCAAATAACCCAGATGTCCCAATCGCCATTACAAATTGGTGTCCATCAAAATTCAACACTGTATCCACAACCAACGACACCAAACCTAAATCACCTTCAATCACCAACAGATTCAGCATCAACAtccaacaacaacaacaacaatacGACAACTCCAACACCAACAAGTGGACCAGCAAAATCAATAACACCATTAACAACAAGCCTTGATGCACTAGCTGAGAAGGCACCAACGCCTGTTCCTGGTCACGAGACATCAGCGCCACCTACACCAGCTCCACCAACGTTAACACCGTTAACGGCATCAGCACTAACGTCACCGCCAGCCAGTCTTCAGCTGCCGTCAAGTATGATAGAAGCTGCTATGAATGGTGCAAGTCTGCCTGGATTATCAATGTCCCAGTCTCAGCCACCAAAGAGTCCGCACGATGAATCCTGCCACAACaataacaacaacaacaataaCAGTCATCATCTAGCTaataacaacaacaacagtATTGGAAGTTTGAGCGTACTAGACAGCCTGAAGAGTCCTTTCCGTTTCGACGACAGAACACATCCATTCCGTTTTGGCGATGAATTCGGCGCTGCAAGCATGGCTGGCAGACTTGGCGAATCGCTGATACCCAAGGGTGATCCAATGGAGGCACGACTGCAAGAAATGCTGCGCTACAATATGGACAAATACGCTTCACAAAATCTTGATACACTACATATAGCAAGACGCGTACGCGAATTATTGTCGATACACAATATTGGACAGCGTTTATTCGCAAAATATGTTCTTGGATTGAGTCAGGGAACTGTTAGTGAATTACTCAGTAAACCAAAGCCATGGGACAAATTAACGGAAAAAGGACGTGATAGCTACAGAAAGATGCATGGTTGGGCCTGTGACGAGAATGCTGTACTATTGCTGAAATCTCTAATACCGAAGAAAGAGTATGTTTCAGGAAAGGAGCAGGGCATGCCAACGTTTGGACGTCCACAGGATGGTGGACCACCGGACATCAATGACGAGAGAATTGCCCATATGCTTTCGGAATCTGGTCACTTGCAGATGAGCCGAAGCGAACACGATACGTCGAATGATGCCGATAGCAAGAGCCCAAGCAGACTCGGTTGTCCAAGTCCGTTTGGCAAAGACAGATACGACAGTCAAAATAGAAGActtaaaaaatacgaaaacgATGACATTCCCCAGGAGAAGGTTGtgagaatttatcaggagGAACTTGCTAAATTAATGGGCAGAAGGAGCGATGACTTGCGTGGACCAAGGGAATTTCCTCCGAGCGCGAtgtttcctcattttttcagtgGGGCCCAGGGTATCCCCGGAATGGAGCGTACCCAAGAAGAGATAAGACTAGCGTTAGACGCATACCACCGTGaactccaaaaattaaatacaGCACCAGGTCAAAATCCAGCTCTGGCAACTCTCTCCGGTCTCCCAAGTCTCCCAGGACTTCTTGCACTTCATCAGCAAGCACTGCAGCAAAATCACATGGCAGCAAATGGCGGTACTGGTGTTGGTGTGCAAGACTTGAGTCTCGGAAAAGTTGATCCACGCAGTAAAATAATGAACGGTGTAACGGaagaggaaaaggaaaaaatggaagaagcCATGAGACACGCAGGTAGTGCATTTTCTCTTGTACGACCAAAACAAGAGCCATCAGCACAATCAACACCAGGTGGTTCAAGTGCAAGTTCACCACTTGGTAATTCAATATTACCACCAGCAATGACACCAAGTGATGAATTTACTGGTGCTGCTGCAGCAAGTCCATTGCAAAGAATGGCATCAATAACAAATAGTTTGATAAGCCAGCCATCAACACCAACCCATCATTCAGCAAATCAACGTCCATTGAAAGCTGTATTACCTCCAATAACCCAGCAACAATTTGATCTTTATAATAATCTCAACACTGAAGATATTGTGAAGAGGGTGAAAGAACAATTGTCACAGTACTCGATATCCCAGAGATTATTCGGTGAATCTGTGCTTGGTTTGTCGCAAGGCTCAGTTTCTGATCTATTGGCACGTCCAAAGCCATGGCACATGCTGACGCAAAAGGGACGTGAACCATTTATACGAATGAAAATGTTTCTTGAGGACGAACAGGCTGTACACAAATTAGTTGCTAGCCAATACAAAATAGCAccggaaaaattaatgaggacCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCCTGTGGAACGCCAATGAAGCCGATGCCACCCACAAAACTCGTCCAAGAGCAGCTCCAAAATGCGGCAAAAGCACAGGCAGCAGCACAAGCAGCAGCCCAAGCAGCGGCCCAGCACCAAGAAAATCAGCTTCAACTTGGACCCCCTCAACCAGGCACTCAACACGGTCCCCACCCCCAGCCACCCCCAATGATGCTGACACCCCCTGGTCCCCATCATGCAGCAAGTCACGCTGCCCAAATATCCATCCAGgagctccaaaaaaagcaGCATCAACAGCAACAAATGGGCCTCCACTCGCCCCACCAAATGACCTCCCCCCTCCGTAATCTTCACGCTCACATATCCCCAAGTGTCTACGAAATGGCTGCCCTAACACAAGACCTCGACACCCAAACAATCACCACAAAAATCAAAGAAGCCCTTCTAGCAAACAACATAGGTCAAAAAATCTTTGGCGAGGCAGTTCTCGGCTTGTCCCAAGGCTCAGTAAGTGAGCTTTTAAGCAAGCCAAAACCCTGGCATATGCTCAGCATAAAAGGCAGAGAGCCCTTCATAAGAATGCAATTGTGGCTAGCCGATACCCACAATGTAGATCGACTACAGGCCTTAAAGAATGAGAGGCGTGAGGCAAATAAAAGACGCAGAAGCAGTGGTCCAGGTCACGACAACAGTTCCGACACGTCAAGCAATGACACAGCCGATTTTTACCATGCATCAGGTTCTCCTGGACCCGGTCCACCATCAGCCAAAAAACAACGTGTTCTCTTTTCTGAGGAACAAAAAGAGGCACTTAGATTAGCATTTGCCCTTGATCCATATCCAAACGTagcaacaattgaatttttagccGGTGAATTAGCTCTATCATCACGTACAATAACAAACTGGTTTCACAATCATCGAATGAGATTGAAACAACAAACACCACATGGACAACCAGAGCCACAATCACCACGTGAACCTGGACAGCCATTTGATCCAGTACAATTTAGATTATTGTTAAACCAAAGACTGCTTGAAATACAAAAAGAAAGACTAGGATTGGGTAATGTACCAATACCATATTCACCTTATTTTAATCCAAATCTGGCGACATTAATGAGTAATGCACTTAAAGAGCAGTGTTCAGGTTTGGATTTATCGATGGGCTCATTGAAACGTGAGCCCAATCAGGAATTTGAGGATGATGATGGTGATGATGCAATGAGTAATCTTGGTAGTGAGGATTCTGATGGATCAACGTCTAGTATTAAACGTGAACCAAATGACAACAATCAGACACCACCAACATCATCAGCAACATCAGCACGTTCTAATAGAAGAAAACCAGCTGCACCACAATGGGTAAATCCAGAATGGCAGGAACCAGCTAGAACTGGTGATGAAGTTATAATTAATGGTGTTTGTGTTATGCAGACTGATGATTATGGTgttaagagagaaaatgaagagacaATTAGAGTTGAACCTACACCAGTACAGGACAGATACGATGAGGATGCTGCGAGTGATGTATCATCTGTTTCTGGTAATAATGGACAGGAACGTGATTTAAGTCCATTGCCAAGTCCAAAATCTACTGGTAATAGTCCAATAACGTCACCAAGGCCACCATCGTCAcaacaaaattctcaaattgagGAGAGTCCAAAGGATACGATTAAACATGAACCTGAAGAGACGTGggattattga
Protein Sequence
MWKATEGVRGNNEDAEGPVDYRTPIYPTYIHARSKTINQLVDEVSRLQQTLQRLQETSAQATARLEEELDNRRQHIARLESKLDRQRDYDEIKREISVLRSVDLSQIPTGEPGKSLEHLLMERTKALQQAETLKPPSTPDAIGGLASPMQRAATASPSHGSGVVGVGTGITPVTTLVSTQQVLQKRSTPTPTVGQTAVAASSILFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQQQQQQQPNQQQTSQSGVLQSQPTTTQITQMSQSPLQIGVHQNSTLYPQPTTPNLNHLQSPTDSASTSNNNNNNTTTPTPTSGPAKSITPLTTSLDALAEKAPTPVPGHETSAPPTPAPPTLTPLTASALTSPPASLQLPSSMIEAAMNGASLPGLSMSQSQPPKSPHDESCHNNNNNNNNSHHLANNNNNSIGSLSVLDSLKSPFRFDDRTHPFRFGDEFGAASMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVLLLKSLIPKKEYVSGKEQGMPTFGRPQDGGPPDINDERIAHMLSESGHLQMSRSEHDTSNDADSKSPSRLGCPSPFGKDRYDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRSDDLRGPREFPPSAMFPHFFSGAQGIPGMERTQEEIRLALDAYHRELQKLNTAPGQNPALATLSGLPSLPGLLALHQQALQQNHMAANGGTGVGVQDLSLGKVDPRSKIMNGVTEEEKEKMEEAMRHAGSAFSLVRPKQEPSAQSTPGGSSASSPLGNSILPPAMTPSDEFTGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDEQAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQENQLQLGPPQPGTQHGPHPQPPPMMLTPPGPHHAASHAAQISIQELQKKQHQQQQMGLHSPHQMTSPLRNLHAHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLADTHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTADFYHASGSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPIPYSPYFNPNLATLMSNALKEQCSGLDLSMGSLKREPNQEFEDDDGDDAMSNLGSEDSDGSTSSIKREPNDNNQTPPTSSATSARSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKRENEETIRVEPTPVQDRYDEDAASDVSSVSGNNGQERDLSPLPSPKSTGNSPITSPRPPSSQQNSQIEESPKDTIKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00046030;
90% Identity
iTF_00047758;
80% Identity
iTF_00046030;