Agra012203.1
Basic Information
- Insect
- Aldrichina grahami
- Gene Symbol
- nfxl1
- Assembly
- None
- Location
- Contig53:1586071-1589732[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 1.3e+04 -8.1 6.4 15 19 157 161 156 161 0.82 2 20 0.13 8.2e+02 -0.3 0.4 4 10 192 198 191 198 0.95 3 20 1.8e-08 0.00011 21.6 16.0 1 18 206 222 206 223 0.98 4 20 0.3 1.9e+03 -1.5 0.4 6 10 249 253 248 254 0.89 5 20 1.5e-05 0.096 12.3 14.3 1 19 259 278 253 278 0.85 6 20 1.1 7.1e+03 -3.3 0.9 6 10 303 307 302 307 0.86 7 20 3.7e-10 2.3e-06 27.0 12.7 1 19 313 331 313 331 0.99 8 20 0.9 5.7e+03 -3.0 0.5 1 7 356 361 355 363 0.49 9 20 6.4e-07 0.0041 16.6 9.8 1 18 366 383 366 384 0.93 10 20 0.31 2e+03 -1.5 0.4 1 5 393 397 393 402 0.75 11 20 2 1.3e+04 -5.0 2.3 5 10 407 412 407 412 0.91 12 20 0.00015 0.94 9.1 16.5 1 18 418 435 418 436 0.98 13 20 1.6e-10 1e-06 28.2 14.5 1 19 445 463 445 463 0.98 14 20 1.3 8.1e+03 -3.5 9.7 9 18 508 517 501 521 0.88 15 20 0.017 1.1e+02 2.5 2.0 4 11 532 539 521 540 0.87 16 20 0.33 2.1e+03 -1.6 0.9 6 10 599 603 598 603 0.90 17 20 6.4e-06 0.04 13.5 6.2 1 12 609 620 609 620 0.97 18 20 0.0014 9.1 5.9 14.9 3 19 649 665 648 665 0.92 19 20 2 1.3e+04 -5.5 2.1 9 13 671 675 670 675 0.72 20 20 2.6e-07 0.0016 17.9 11.7 1 17 716 734 716 736 0.86
Sequence Information
- Coding Sequence
- ATGCCGCCAACTAAGAACAAGCAACAGAATTCTGTTAAAAATCCTACACAAAAATTCAATGAGACTCATGCCAGAAACATTGAAGTCGCCAAAAAGCTGGTTGAAAATTATGTGTCGTCTTCGGAAGATGAGGATGAATTAGATGAAAATACCATTTTAAAATCTTTATACCAGCATTACAATACGCGCAAGGAAGATGAGCACCTACTAGCCAAAACTGCCGGCTTTTTAGAAAATGTTTTGCAAACTGGAGCTGCAACGTGTCTTATATGTATTGGAAGCATAAAACGATCCAATGCTATATGGTGTTGCAAATATTGCTACTGTTTCTTTCATTTGAACTGTATAAAAAGATGGGCTAATGACAGTGTGGCCCAGGTAAAAGCCCAAACTCAAAATGAACAGGGCTACTACAATCACATGGGAGAATATGTAGCACCCAAAAAAGCTAAAGCATTGCATTGGTGTTGTCCTCAGTGTAGAAGAGAATTTCAACCTGATGAAAGACCCACGGAATATGAGTGCTTTTGTGGCAAAGAAATAAATCCGCCCTCACAGCCCTGGTTAGTTCCACATTCTTGCGGTGAAATATGTGGTAAGGCACTTCAGCCAAATTGCGGCCACAAATGTACTTTACTATGCCATCCCGGACCATGTCCTCCCTGTGCCCAATACGCCATAATATCTTGTAAATGTGGAAAATCAGCTGCTAAATCAGTACGTTGCGCCGACAAATTATGGGAATGTCAGCAGAAATGTGGTTTATTATTGCCATGTAAACAGCATGTTTGTAAAAAGTTGTGCCACAAGGACGGCCAGTGTCCACCGTGCCAACAAACAAGTATGCAAGTGTGTGAATGTGGCAGAGAAACGGCTAAACGGCTATGTTGTGAACAGATGTGGCATTGTAAGAAACCCTGCGGAAAAACTTATTCATGTGGCTTACACACTTGTAAAAAAGTTTGCCATTCGGGTGACTGTGGGGTTTGTCCTTTAAGTTTGCCACGATCATGTCCATGTGGTAAAACTAAAAAAATTGGCCCTTGTTCGGAGGTGATAGATACTTGTGGAGATACTTGCCAAAAACTATTAGCTTGTAATATACACACTTGCACGCAACGATGTCATAAGGGCAATTGTAATTTGTGTTTGATTATAACCAAAAAGAAATGCCGCTGTGGTATGCACGAAAAAGAACTGCCATGTTCCAGGGAATTCACATGCGAAACTAAGTGTAAACAAATTCGTGATTGTGGCAAGCATCCGTGTAATCGCAAGTGCTGCGACCGAAACTGTCCGCCATGTGACAAAGTATGCGGTAAACCATTGTCGTGTGGTAAACATAAATGTCAATCGATTTGCCACAAGGGACCCTGTTATCCGTGTCAGCAAAAATCTCAAATCAATTGTCGATGTGGTAAAAGTAAAAAAAGCGTACCCTGTGGCCGTGAGCGTACAGCACGTGTGGTTTGTTTGGAACCATGTCGTATACCATCAAAATGTCATCATGACAACAAACATCGCTGTCATAAAAATGAATGTCCAGCTTGTGCCCAACCTTGTGGTTTAGCAAACGACACTACAAAGTGTGATCACATGTGTATGGCGAAATGTCATGCATCAGTTAAGATAGCTAAGAAATCAAATTCTGATACTACCAGTATTTGGGAGCCAACTAAACAGTTTGAATTTAAACAAATGCCTCATCCGCGTTGCGAACAAAAGGTAAGCGTGACTTGTATAGGCGGACATGAAGTAGCTGATTGGCCCTGTTGGAATTCTAAACCTACATCGTGTCAGCGTTTGTGTAACCGTTCCTTGCGCTGCGGCAATCACAAGTGTACTTTAGTATGTCATTCTGTGAAAGATTTGAAGGACATGAAGGAACAACCTGGTTGTGCCCGTTGTGAACAAGGTTGCAATATTACTCGTCCCGAAGGATGTACACACAATTGTCCCAGACCATGTCACCTGCCACCTTGTTATCCTTGCAGTGTTGCTATAAAAACTAAGTGTCATTGTGGCTTATTGCCCATTGTTTACAAATGTAGCGACTATTACAATACTGCAGGCAGTGAAGGTGAAATTTTGGAGAGACAAGAAAACTTAAAGAGCTGTGGCAATAGATGTTTAAAAAATTATCCTTGCGGCCATCGCTGCGCAGCCAAATGTCATTCTGGCCCTTGTCCCTATCCCGAAGCTTGCCGCAAAAAATTACGCATCTACTGTGATTGTAAACGTTTAAAATCCGAAATTTCCTGTGACAAGCATCGAGCTGGTATGCAAAAATTGCAATGTGATGGAAATTGTGTTGAAACACAAAAAACTCTGGAGCAGGCACGGCAAAAGGAAGAGGAATTACTTCGAAAGCAAGAAGAAGAACGCAATCGTTTGGAAGTGGAACAATTTGAAAAGAAATTCAGCAAGCGCAAACCCAAAGAACGTAAAAATATAGAAGTGAAACAAAAGAACCCCATTAATTGGAAACTAATTGGGGTATATGCTGGCATTGTTGGAGCTGTATTGCTAGCAGTTGCTTTAGCATTTTACGAGGAACATTGA
- Protein Sequence
- MPPTKNKQQNSVKNPTQKFNETHARNIEVAKKLVENYVSSSEDEDELDENTILKSLYQHYNTRKEDEHLLAKTAGFLENVLQTGAATCLICIGSIKRSNAIWCCKYCYCFFHLNCIKRWANDSVAQVKAQTQNEQGYYNHMGEYVAPKKAKALHWCCPQCRREFQPDERPTEYECFCGKEINPPSQPWLVPHSCGEICGKALQPNCGHKCTLLCHPGPCPPCAQYAIISCKCGKSAAKSVRCADKLWECQQKCGLLLPCKQHVCKKLCHKDGQCPPCQQTSMQVCECGRETAKRLCCEQMWHCKKPCGKTYSCGLHTCKKVCHSGDCGVCPLSLPRSCPCGKTKKIGPCSEVIDTCGDTCQKLLACNIHTCTQRCHKGNCNLCLIITKKKCRCGMHEKELPCSREFTCETKCKQIRDCGKHPCNRKCCDRNCPPCDKVCGKPLSCGKHKCQSICHKGPCYPCQQKSQINCRCGKSKKSVPCGRERTARVVCLEPCRIPSKCHHDNKHRCHKNECPACAQPCGLANDTTKCDHMCMAKCHASVKIAKKSNSDTTSIWEPTKQFEFKQMPHPRCEQKVSVTCIGGHEVADWPCWNSKPTSCQRLCNRSLRCGNHKCTLVCHSVKDLKDMKEQPGCARCEQGCNITRPEGCTHNCPRPCHLPPCYPCSVAIKTKCHCGLLPIVYKCSDYYNTAGSEGEILERQENLKSCGNRCLKNYPCGHRCAAKCHSGPCPYPEACRKKLRIYCDCKRLKSEISCDKHRAGMQKLQCDGNCVETQKTLEQARQKEEELLRKQEEERNRLEVEQFEKKFSKRKPKERKNIEVKQKNPINWKLIGVYAGIVGAVLLAVALAFYEEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01313435;
- 90% Identity
- iTF_00260355;
- 80% Identity
- -