Basic Information

Insect: Aldrichina grahami
Gene Symbol: GLIS3
Assembly: None
Location: Contig28:1032398-1040440[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.037 1.5 8.9 0.1 3 23 570 593 569 593 0.90

2 5 0.77 31 4.8 1.3 2 23 603 629 602 629 0.84

3 5 2e-06 8.3e-05 22.4 0.5 2 23 636 659 635 659 0.97

4 5 0.0016 0.066 13.2 0.8 3 23 667 689 665 689 0.91

5 5 6.6e-05 0.0027 17.6 0.4 1 23 695 719 695 719 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.037	1.5	8.9	0.1	3	23	570	593	569	593	0.90
2	5	0.77	31	4.8	1.3	2	23	603	629	602	629	0.84
3	5	2e-06	8.3e-05	22.4	0.5	2	23	636	659	635	659	0.97
4	5	0.0016	0.066	13.2	0.8	3	23	667	689	665	689	0.91
5	5	6.6e-05	0.0027	17.6	0.4	1	23	695	719	695	719	0.94

Sequence Information

Coding Sequence: ATGTCTTCCACTTTAAAAATTAATACTACTATGAATAGCCAAAATCTAAGCATTCCCATACAAAAATCATCAACATTAAATATGTACCACGAAATGGCACAACCGTCGACGCCACCTTACACACCATTTGCAAACTCCGCCGTTTCGCAGTGCAATGGACAACAAGTTGAGAATTACACAGCTACAACAGCACTCTCACCGCCAATGCCAGCTCCAGTAAATTGCAATTTAATGTCTCCACCATTGAGTGCAACACCAATAAGCGAACATTTTCGCGCTTCCCTCTGCAATTTGAAATCATTCAACAGTGGCAGTAATTATAACGATTTTGCCACAGCCGATGCTCATTTTCCAGATTTTTCACAATTAACATTTGCAGCTGTTGAAACACCAAGTTCAATTTATGGCGGCATTGGTATGAGCTGTGGTGGTGCAGTCAACCCAGCCATGGATGATGAGGACTTTCTGCATAAACGCCATCATTCCATGTACTATTCCGGTGGCGAGGAGGAAGAATTTGGACATTTATCGGATGGTGATGTAAAATGTGAAACGATGCAAATACAAGAACAGTCACAACAAGGTGTCTTTCGTTTTGAGCCTGAAGATATTGCTCGCTTAAGCGAAACCTGCCAATATGAGGATATCAATGGTGTGCCTGTAATGCCCCAGACACCGTTTACTCCACAAACACCTTATACACCATATCCTTCCACCTACATGTCATTTACACCTACGACAACACATCAGCCACAACAACAGCAACAGCAACAACATAATGACTATGACATGGCCTATAGCAGCCAGCAAATGCTGATGCCAACAACCATGCAAGAATGTCAGACGTTAAATGGCAACAGCAATGACTGCTTAAACTTAGATATAGAATATTATAATTATGATGAAATAAATTGCCAATCCAAGGAACAATCACCCTGTTCTTCACCTCCTTTGGATCCTTGGATGTCCTTGACGGTATGCGATACCATGCAACAACCACCCAGACAAGAGTCACCCAAAATAATCAACACCAGCTATGCCGGCTTCACACCTCCACAACAGATCACCTATGAGCCCAGTATAAAGCAAGAAAATGCCACAACAACCAAATTACCCTCAATGATGTCTACGTTTGGCACTCCGAAATACGAACCCTTAAGTGCCTATTCCTATACGAATTATGGCGATTATGGCCAGCAAAGAACTCATATTTATAGTCCTCCTGCCCAGTCAGCGGCCAACACTTCTACTCCGTATTCACAAAATTTAAATTCATTCACCGTCTTGGCTGATGATTTCGAAAACTGCAACATGTTGAATATGGACAAACCAAACAGAGAACATAAAATAATATGGACCATTAATGAACTGGACGAAATAAATGAGGAATTAATGAGTGAGTTTTGCAAACAACCGGCACAAAATAACTGCGGTTATGACAGTCATCACTACTACTGCAGCAATGACAATTCCACCAACACCGATGAGGATGAAGAAAATAATTTGGAGCTCATCGAAGAAATTGAAACATTTCCCGAGGAATTGGAATCTGAAGGTGTTGAGGAGGACAATGATGAAGTCTTTATAGTGGAAAAATGCAAAACTAATAAGCAGCGAAGAAAACGTTGCACTTCACAAACCTCAAATGCCTCATCTACGGCCACAGCTCTGTCTGTTGTGGATCAGCCCACACAGGAGCCCATGATTTGTCGCTGGACCGACTGCAATGAAATTTTCCCCAATCAAGTGGAATTTGTGGCCCATATCGAAAAGAGACACGTTGATGTTAAGAGAGGAGAAGATTTTTCCTGTTTCTGGCATGAATGCCCCAGACGTTACAAGCCCTTCAATGCTCGCTACAAATTGTTAATACATATGCGGGTGCACAGTGGCGAGAAACCAAATAAATGTCCGTTTCCTGGATGTAATAAGGCATTTTCGCGTTTGGAAAACTTAAAAATCCATCAACGTTCACATACCGGTGAACGTCCCTATGGTTGTCAATACAAAGGCTGTCTAAAAGCATTCAGCAATAGCTCAGATCGTGCAAAACATCAAAGGACCCACTATGATACGAAACCTTATGCCTGTCAGTTGCCCGGCTGCACCAAACGTTACACAGATCCCTCTAGCTTGCGCAAACATGTGAAAAATCATGCCCTACGCAATGCCAATGGCCATTTGGGACGCAGAAAATCTTCAAGTGCTGCCACAACAACGACTAACAAAAAGTCAAATGCCAAAACACGCAGACATTCGGAATCATCAGTGTTGCAAGCCAGTAAAACTAAAAATAACACTACTAATAACAATAACATGCAGCCACAAGAAATTGTCGTGCAAGTGCAACAAGGTAACCACAACAAGCAACGCAGTAACAGCTTCAGTGAAATGTCATCATCATCATCATCGGCATCGTTAGCCAGCATTGCAATGGTAAATAACAATTATGAAAATAAACAAAAATTAACAAATGTGAATTACAATAATACACCAAACAATAAACAACTGCAACAACAGCATCATAATAATCACAAGCATATGTTGGTGGCAACAACAAAAACTGAATCATCATCATCATTATTATTATCCACAGCTAAACACAATTCAATGAACTTTAATGAGTTGTCAAATTGTATTGTTACCATTGAACAATACAACAACAGCAACGGCAACGGCATCAAAAACAATCAACTTGAAAATAGTTGCAACAATGTCATTGACAAGAGTTCCAGTGATCAAAATACAACCACTGTAACCACTGCTCTGGCCGCATATAATTTGGGTAACAATACAGCAACAATAACACAAATGGCAAACAAAACTGGCAACAACAACAGCAATATCAATGAAAATATTAATCAATTAAATGAATTTCAACAATTGTTACAAGTAAAATCATCATCAACCAAATGCCAGCAACAAACAAATGCGAATAATACTAGCAGTGGCTCAACAACATTAACATGTGATGTTTTAAATTACAGCAGCAGCTGCAACACTAACAACAGTAACAATGCAAAATATGTAATGGCCAATACAACAGCAACAACTACTGCAAGCGGCATTACCACAAATTCGATTAGCACACAATGCCACAATAACATCAACAATCCAACCCACACCACCACCAGCACCAGCAGCAGCAGCAGTATCAGTCCAATTCTAGCAACGACGAGTACAACTGGCAATGACAATGATACAAATGAATTTGTTTCATTCGAGTATGTTAAAAAGCTGCTGTCCGAAACATTTGATTATATGGATGAGGATAATAATGATAGTTGTTGTGATAATAATGTTCAAAATACCAATATTACAGGAACCTCCTCGGCTTCAGCATCAGCATCGTCATCATCATCAACAACATGTGTTGATGTACTTGCTGCTGCTGTGGCCAGTAGTGGTATTGGTGTCATTAGTGCGGATAAACTTAAGCCCACAACAACAGTAGCAACTGCAACAGCAACATCATCATTGTCATTGTCAACAGCAACAACTATAAGGCCAGCATTGGTGACAGCAAATGAAATTGTTGCTAATGTGTCTAATAAAAATTTACATAATGAAAATGTTGAACAAGAATTTGCCAATAATTTTGACATGGATTATTTGGAAAGTTTTATGTAA
Protein Sequence: MSSTLKINTTMNSQNLSIPIQKSSTLNMYHEMAQPSTPPYTPFANSAVSQCNGQQVENYTATTALSPPMPAPVNCNLMSPPLSATPISEHFRASLCNLKSFNSGSNYNDFATADAHFPDFSQLTFAAVETPSSIYGGIGMSCGGAVNPAMDDEDFLHKRHHSMYYSGGEEEEFGHLSDGDVKCETMQIQEQSQQGVFRFEPEDIARLSETCQYEDINGVPVMPQTPFTPQTPYTPYPSTYMSFTPTTTHQPQQQQQQQHNDYDMAYSSQQMLMPTTMQECQTLNGNSNDCLNLDIEYYNYDEINCQSKEQSPCSSPPLDPWMSLTVCDTMQQPPRQESPKIINTSYAGFTPPQQITYEPSIKQENATTTKLPSMMSTFGTPKYEPLSAYSYTNYGDYGQQRTHIYSPPAQSAANTSTPYSQNLNSFTVLADDFENCNMLNMDKPNREHKIIWTINELDEINEELMSEFCKQPAQNNCGYDSHHYYCSNDNSTNTDEDEENNLELIEEIETFPEELESEGVEEDNDEVFIVEKCKTNKQRRKRCTSQTSNASSTATALSVVDQPTQEPMICRWTDCNEIFPNQVEFVAHIEKRHVDVKRGEDFSCFWHECPRRYKPFNARYKLLIHMRVHSGEKPNKCPFPGCNKAFSRLENLKIHQRSHTGERPYGCQYKGCLKAFSNSSDRAKHQRTHYDTKPYACQLPGCTKRYTDPSSLRKHVKNHALRNANGHLGRRKSSSAATTTTNKKSNAKTRRHSESSVLQASKTKNNTTNNNNMQPQEIVVQVQQGNHNKQRSNSFSEMSSSSSSASLASIAMVNNNYENKQKLTNVNYNNTPNNKQLQQQHHNNHKHMLVATTKTESSSSLLLSTAKHNSMNFNELSNCIVTIEQYNNSNGNGIKNNQLENSCNNVIDKSSSDQNTTTVTTALAAYNLGNNTATITQMANKTGNNNSNINENINQLNEFQQLLQVKSSSTKCQQQTNANNTSSGSTTLTCDVLNYSSSCNTNNSNNAKYVMANTTATTTASGITTNSISTQCHNNINNPTHTTTSTSSSSSISPILATTSTTGNDNDTNEFVSFEYVKKLLSETFDYMDEDNNDSCCDNNVQNTNITGTSSASASASSSSSTTCVDVLAAAVASSGIGVISADKLKPTTTVATATATSSLSLSTATTIRPALVTANEIVANVSNKNLHNENVEQEFANNFDMDYLESFM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00260206; iTF_00259350; iTF_00200300; iTF_00922489; iTF_00921689;
90% Identity: iTF_00260206;
80% Identity: -