Basic Information

Insect: Aldrichina grahami
Gene Symbol: -
Assembly: None
Location: Contig2:8384757-8398990[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.093 3.8 7.7 0.7 1 23 1691 1714 1691 1714 0.91

2 12 6.6 2.7e+02 1.9 1.5 1 23 1877 1899 1877 1899 0.92

3 12 0.00067 0.027 14.4 2.8 2 23 1902 1923 1902 1923 0.97

4 12 3.2e-05 0.0013 18.6 0.2 3 23 1931 1951 1929 1951 0.98

5 12 6.5e-06 0.00027 20.8 5.8 2 23 1958 1979 1957 1979 0.97

6 12 7.5 3e+02 1.7 0.1 5 23 1992 2010 1991 2010 0.96

7 12 0.032 1.3 9.1 0.1 2 23 2049 2069 2048 2069 0.96

8 12 0.00021 0.0085 16.0 0.3 1 19 2075 2093 2075 2097 0.95

9 12 4.5e-06 0.00018 21.3 1.8 1 23 2105 2127 2105 2127 0.99

10 12 0.00016 0.0064 16.4 6.5 1 23 2133 2155 2133 2156 0.96

11 12 0.00094 0.038 14.0 6.4 1 23 2161 2183 2161 2183 0.99

12 12 0.0024 0.098 12.7 6.0 1 23 2189 2211 2189 2212 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.093	3.8	7.7	0.7	1	23	1691	1714	1691	1714	0.91
2	12	6.6	2.7e+02	1.9	1.5	1	23	1877	1899	1877	1899	0.92
3	12	0.00067	0.027	14.4	2.8	2	23	1902	1923	1902	1923	0.97
4	12	3.2e-05	0.0013	18.6	0.2	3	23	1931	1951	1929	1951	0.98
5	12	6.5e-06	0.00027	20.8	5.8	2	23	1958	1979	1957	1979	0.97
6	12	7.5	3e+02	1.7	0.1	5	23	1992	2010	1991	2010	0.96
7	12	0.032	1.3	9.1	0.1	2	23	2049	2069	2048	2069	0.96
8	12	0.00021	0.0085	16.0	0.3	1	19	2075	2093	2075	2097	0.95
9	12	4.5e-06	0.00018	21.3	1.8	1	23	2105	2127	2105	2127	0.99
10	12	0.00016	0.0064	16.4	6.5	1	23	2133	2155	2133	2156	0.96
11	12	0.00094	0.038	14.0	6.4	1	23	2161	2183	2161	2183	0.99
12	12	0.0024	0.098	12.7	6.0	1	23	2189	2211	2189	2212	0.96

Sequence Information

Coding Sequence: ATGACTGAAAATGTTCAGTGTCCAGTATGTACTCTATACCTGCATGCAGGAATGAACCTTTCGGATCACTTGGAGACACATCCGAAAGAACAAGTGATTCGAGCCCTAGTACAAATGACCATATCTGGCACAGGCGTTGGGAGCAATAATACGTTGGCAGCTGTTTTAGCTGGTGAAAATGGTAACAAAAAAACAGCAGCAGAATTGGACGAGAAACCTTTGCCGAACATAAAAGATAACGAGCTTAATATTATAAGTACGGGCAATAGTTGTAGCGCCAGCTCAAGCAATTCTGCCAGCAATTGTTCATTGTCAAACCAAAGTGTTAGTAGTAGTCATAATTCTAATAACGTATTAAATTTTTCCGGTACTAAAATTGAACGTCATAATGAAAACGAGCAGGATAAAACGCAAATATCCCCATCACCGAAGCCGGCCAAAACGGTGGTTAAGTCGGAATCGAACACAGTGACAATGGGAAAAGACAATGTGTCTGCGAATGAAAGTATGAATCAATGCTTTTCGAAGAAGAATTTCGAGCAAACGAATGTATCATCAAACGCTACAATAAATCCAAGTCATTCATATCATCCAAATGCAGCAGAATTGACCAATACGAACAATGTTCATAATAGTTTTAATGTGTTTGGTGGGAATCCTCGCTATGAGCAGCATCAGCGTAATGGTGTAAATAATCAAAATCAGTTACCTACACCGCCGCATATGCCACCACCACCACCTCCAACATCAGCGCAAAGTCAACATTCTGGTCAACATCAAGAAGTAGTCCGTGGAATTATACCATCATCTAATGGGACTTTTCATTCGATACAACAGCAACAATTAACAGCTCCACCACCCCCACCGCATCATTCATCATCGCATTTAGGCAATACATCAAATAGTCAGCGTCAGGCTCACATGTTTGCAGCAGGTCAACATCCACCACCACCATCGAATTCTCATCATCAACAAAGTTTAAAGGTTATATATACGACAAATTTGCCACCACCGCCTCCGCTGCAGCTTTTCACTTATCAGCCGCAAACACATTTGCAACATCATCAGAAACCCCCACCGGCCTATGGCACTGCAATTAGTCAAATACGATCTCAACATAACCAGAATAAGCATCAAGTGACAGCGTCATTGCCAACACAGCATCAAACATTGCAAACACATTCAGTTTTACAACAACAACAACAGCAGCAGCAGCAACATCTTTTGCAGCAAACGTTGCAACACAATTTAAGGATTCAAGTACCACCGCAAACGATTCCAACAAAACATTCATATTCGCCAAAAAACAATGGTTTGCCAACTCAACATCATTCAACAACTCCTACTAGGCATAATCAACACCAACAACACCAGCAACTACCCAAAGCAGATATGTCACAACACCTGCAGCAGGAACAGCAACAACCACATGCTAACTCTGAAAATACACAAAACTCTAATAATCACATTTTCAATTCGAATGAAATTTTGAATAAATCAATAAAAGGTACATCTGCAACGGCAGTACAAAATACAAATTCCAATGTACCGTCGTACCCACAAGTTTCAATAAGTCCATCTGCTGCTTCAACATCAATGGCTGCTGTAGCTGCCTCAACATTAGGTAGACGCACAAATTCACCATTTGCAGCGTTATTAGCTGCGGCTGCTGGTGCTCCATCGCCTTCTAATGCTTCGTCAGTTTTACGGTACGCTGAGTCGCCGGTTGCACATTATTTAGAACGGGAAAATGGAGATTTTATTGTACAAGAAACACCGAAACATATTGTTGAATGTGTTGAGACAGATAATGGAGAGTTTTCTGTCATTGAACGTATATACCAATCACCACCCAGTGTTTTACATATTCATGATGATGATGATGATGACGACAATGATGATGACGATAACTGTGACGACCAGGGTGAAGATGAACAAAATGAATGTCTTGATAGTAAGTCTAAACAGCTTGATATTAACCCCAGTGATAAAACTGAAGATGAAATGGATGAAAAGCAAAATACAACCAAATCGTCCTGTAATGACGATGCCAAGATGTCTGGTGAAACGAACGAATCTAAAAGGAAACCTAAATCTAAAGATGAGTCCTTGGAGGATAAAGAAATTGTTGATTTTGTAAGCATTTCAAGTGACAGCGGCGACGAAGAAGAATTCATATCACAAGAACGAAAAGATTATAAAAATACCACCGAAAAGAATAAAATAATAAAGAATCAAACATCCTCCACATCAACACACTCAATGTCTACAACGTCAGCGCTGTCCTTATCGACATCCTCATCTGTATCTCCTGTATTAACAGCATCCAATGGTGGTGACGATCAACAAATAAATTCTACACCATCAACTTCATTACATTCTACTTCTTCTTCAGCCACGGCAAATACAAATACAAACCAAACACAACTTAATTCTGGAGTCACCACCAATACAAATAGTCGAAAGAAATCATCGAAAAACACAATCACAGTTTTAAGTGATGTTCAATTGAATTTAAATGAATACTTGGATTTGGTGGGTAATATAATTGCTTCGAGTAAAGTATCAGCGCAGTGTAAAACATTTGCATCGATAGCTCCAATTCCTTTGGTTAAAATCGAAAAGGAAGAGCCTATGGATGAATACATAACAACAAACACAACAACATCAACAACAACCAATTTTGAAACTCCACCACAACCACCAACACCTTTAAAGGCCAACAAACATGAGACTGAAGAAATAACTGATACCCCTAGCAGTAGTAATAGTAAACAAACAACAAATAATAGTAATGTAATTTTAACAAATGAACTAGAACATGATGAACAAGAAGAGAAAAAACCTCAGGTCTTCGAAAGTGCTCCCGAAAATGAAACTGGAAATTCTAACGTCTTTTCGAATGCTTCATCTAGCTTAACGACTATAAATTCCAGTCACGTTACTAGTGTTATACGTATGGCCACAACTAGTCAACACCAAACCCAGCTGCAACAACAACTGCTGAATCCTGTAGAAAGCAATAAAAGCTCTATAGAAGCTGAAGATCTATCACATCCCCAACGTAATGTTCAATCTTTGGCAAACTCCAAATCATTAGGCCAGACACCATTGGCTCGCAAAGGTCCAAAAAAACTTGTTATTAAGCCTAAATCTTCAAAGACTGAAGTTTTGCCACCAACCTCAAGCACTGCAAATAAACCAAACTCAAATGTAGTACATGAAGATCAGGAAATGCCAACAACTTCTGCTAAGGCTAGGCAAGAGTTTACAAAACAAAGTTCTCTCGAAGAAGATGTGTTTAATGTCACAGATATAAAGGTTAAAAATGAACCCATCACGTCTATAACATATGAAAATCAACAACAACATTCTCACTATCAACCAACTACGAGCTTCAGTATCTTGGAGCATCATCTCAATTCTAAAGAACCTATTCTCGAGTTTAAGGAGGAAAAGCCTTGCATAACAGAATCTACTGTGCCGCCAACGTCGATCATAAAAGAAATGAAGTTAGAAAATAATGTTAACGATGATGCACGTGTACTTTATGATTTTGCTAATTCCAAAAAATCTCAAAACGAAACACCGCCAACATTTCCATCTTCCACATCGCTTTTTGCAAGCAAACAAACTTCCATAGAGATGACATCAGCCGGAGAGGTTCAGCAGCAGCAACTAACTAAGGAAATGAGTCATGAGCATGATACATCTTCTTCATCGTCATCAACATACTCATCGCAATCAGCTATGGACGCAACAATGCCATCAGAAGAGCTTAACGAAAGTTCTGCTACAAATACTTCTGCTGCAGTAACTGGTCAAATTCAACAACAACCAAATCAGGCGTATACTGATTTTCACTTCAATTATATGTATAATAATGGTGGTACTAATGTGATGGCGGTTACTTCTGCCGAACAAGCTGACATAAAACAACCACAGCAATTCCCAACATTTTATCAAAATTCCAACAATAACAACAACAACAATACAACGTTGTTGGAAGATTCATCATCTAGTAAACACTATACGGAATATCAACAGCAACAACACCATAATCATCATCCGGTACAGCATCAATCACACCATCAATGGTTTAATAATAATAATAACTATCAAACGTCTGAACCTAACGTTACACCAATATCTTCAAATCATTCAGTTTCCAACATGAACAATCCTTTAGATGGCAGTGAAGTTAGTAAATATTTGGATTTGGATTCATGTAAACGCGAGCAAAATATTGATATAATTGTTGGCGATCGTGTAACTGTACCACCGCCGCCTCCACCATCTTCCTCGACTTCGTGTTCGTTTAATGGCGCAACTGACAACAGTATGGCTGGTATCTGTTCAACCGCAGCCACCTTAAACATACGTACCGATGAAAAAATGCCAGCTAAAGGTGAAATTTCTGAACAGGAAAGCAATTGCGATATTGATAATTCGTGGAGTCAACCGATGTATGGCGATATATCGGCACGCTTTTTTAAGACAACATTTCCCGGCATCTTTCCGCAAGACAACGGTTGGAATCATGAAGAATATTTTACTGTTCAGGATTTGAGTGCCTCCACAACTGCTCAAGCTACTACTAGTGCCAGCAACAGACTGAAAAGCTTTGAGCCGACCAATAGCAGCAGCAACAACAACAGCAGTGGAATGCCAATATTTTCCCAAAATTCCAATGACAATTGTAATATTGATGTAATGCCATCAACATCTGCTAAAATCCGCAAGAGACGCAAACGTAGTTCTCAAGATGGCAAAACGTCACAAGCAAACGGCAAGCGCATGCAGCCAACATCGACAGTAACCTCACAACAAATGATGATGCAACATCAAACTGAGATACCGGGAGTTGAGTTTAATTTTCAACATCAGCATCATTTACAGCAACAAAATTTGCAACAACCCAGTACATCGACAGCATTTTTGGCAGGACCATCAAATGCTAGTACTGCCTTAACATCAGGCTTTATGATGCAACAGCAACAGCAGCACCCGCAACAGCAGCAAGCGCAGCCACAACAACACCAAACCCAACAGAAACAACGCACAAAAGTTTATGAATGCGGGCATTGCAATGCAAAATATTCCAAACTTAAAGATCGTAATGCTCACATGGTTGATGTCCACAATTATATACGCCAAAATAGAAGATTAGTATGTCCCGCAACTGGCCTTGCCACGCCCCTGACGAATTCAGATATGCATGATCCTGCTCTACCCACAACAAGTGCAGCTGGTAGCATGTTGGTGACTCCTTTGCAAAATGCTGATTGTGCGGGCGATTACAAACAGAGTATAGTAAAAATAGAAAATGAAAATATTCAACGGGATCTAACGGGCGTAGAACCAATCAATGCCAATATAAGTGCTAAAACTGAAATTATGGAAGACGACAAACTAAATTTAGCCCTAGTACCCATGAACTCAGCAAATGGTGATGCAAACCTTGAATACGATACAAAACCACCAACCAATAGTTTGCCATTGTCGCTGACAACTCCCACCAGTAAATTAACAACACTCTATCGCATGTTGGTATCGTTTAATATGACAACATTAAAACAAAACCAAAGCCTTTCCGAATTCGATGAGAATCTTATAAAATCTTCGATATTCTTTTGTTACATCTGTCGCCAGAATTTTAATTCAGTTAAATTCTACGACGCCCATTTGACCGAACATCCTGCTGAATGTTTTACTTGCGGCAAAAAATTCCAGCGGTGGAAAAATTTCTCGTTACATTTAAAACGTCATTTGGGTTGGAAGGAATTCGGTTGTACGGTATGCGATAAGAAATTTGTGGTACGCAGTGCTCTCGTTGAACATATGCGTATGCATTCTGGACTCTCGCCGTTGAAATGTAAAGTTTGTGGTAAACACTTTAAACGCTATTCGAACTTAACGCAACATCGTAAGCGACATTCGAAACAAATCGTTCGTAGGAAAGAGTACGTTTGCTATTGTGGCGAAGTCCTACCATCCAAAGCACGCTTCTTATGGCATAAAGAAACTCATGATTCGAAACCGAAATGCTGCCCCCATTGTTGTGATCGATTCGTGCATGTCAACTCTTTGCGACGTCACATACGTCTCGCACATTCAGATAAATTCGATTACACTGAACCGATGGAGTGTCCCATATGCAAACAAATATTTGCCAAAGCCTCTATGAAAGCTCACATGGCAACACATTCCACAGAAACGCAATATGATTGTGCTATTTGCAGCAAGTCCTTCTCAACAAAATGGAATTTGAAAATTCATTCTTGGGTACATGCAAATCGCACCGCCAAACCCTTCAAGTGTGAACACTGCCCCAAGGCATTTGTGCGCGAGGTTGATTTCAAAAACCACATGAATTCCCATAAACAAATCAAACCATACACCTGCGAAGTGTGTGGCTGTAAGTTTATACGCAAATACAATTATATGCGCCACAGAAGGGAGCATCATGGCAATAAAAAGTACACCTGTGATTTATGTAAAAAGTCGTTCCATCGCCACTACTATCTGATCGAGCATAGACGCATACACACCGGCGAACGACCTTTTCAATGCACGATTTGTGGTAAAAGTTCAACAACCAAAACTAATCATAACAAACACCTAAAGATCCATCATTCACGAGATCCATTTACGGTAGAAGTATAA
Protein Sequence: MTENVQCPVCTLYLHAGMNLSDHLETHPKEQVIRALVQMTISGTGVGSNNTLAAVLAGENGNKKTAAELDEKPLPNIKDNELNIISTGNSCSASSSNSASNCSLSNQSVSSSHNSNNVLNFSGTKIERHNENEQDKTQISPSPKPAKTVVKSESNTVTMGKDNVSANESMNQCFSKKNFEQTNVSSNATINPSHSYHPNAAELTNTNNVHNSFNVFGGNPRYEQHQRNGVNNQNQLPTPPHMPPPPPPTSAQSQHSGQHQEVVRGIIPSSNGTFHSIQQQQLTAPPPPPHHSSSHLGNTSNSQRQAHMFAAGQHPPPPSNSHHQQSLKVIYTTNLPPPPPLQLFTYQPQTHLQHHQKPPPAYGTAISQIRSQHNQNKHQVTASLPTQHQTLQTHSVLQQQQQQQQQHLLQQTLQHNLRIQVPPQTIPTKHSYSPKNNGLPTQHHSTTPTRHNQHQQHQQLPKADMSQHLQQEQQQPHANSENTQNSNNHIFNSNEILNKSIKGTSATAVQNTNSNVPSYPQVSISPSAASTSMAAVAASTLGRRTNSPFAALLAAAAGAPSPSNASSVLRYAESPVAHYLERENGDFIVQETPKHIVECVETDNGEFSVIERIYQSPPSVLHIHDDDDDDDNDDDDNCDDQGEDEQNECLDSKSKQLDINPSDKTEDEMDEKQNTTKSSCNDDAKMSGETNESKRKPKSKDESLEDKEIVDFVSISSDSGDEEEFISQERKDYKNTTEKNKIIKNQTSSTSTHSMSTTSALSLSTSSSVSPVLTASNGGDDQQINSTPSTSLHSTSSSATANTNTNQTQLNSGVTTNTNSRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKVSAQCKTFASIAPIPLVKIEKEEPMDEYITTNTTTSTTTNFETPPQPPTPLKANKHETEEITDTPSSSNSKQTTNNSNVILTNELEHDEQEEKKPQVFESAPENETGNSNVFSNASSSLTTINSSHVTSVIRMATTSQHQTQLQQQLLNPVESNKSSIEAEDLSHPQRNVQSLANSKSLGQTPLARKGPKKLVIKPKSSKTEVLPPTSSTANKPNSNVVHEDQEMPTTSAKARQEFTKQSSLEEDVFNVTDIKVKNEPITSITYENQQQHSHYQPTTSFSILEHHLNSKEPILEFKEEKPCITESTVPPTSIIKEMKLENNVNDDARVLYDFANSKKSQNETPPTFPSSTSLFASKQTSIEMTSAGEVQQQQLTKEMSHEHDTSSSSSSTYSSQSAMDATMPSEELNESSATNTSAAVTGQIQQQPNQAYTDFHFNYMYNNGGTNVMAVTSAEQADIKQPQQFPTFYQNSNNNNNNNTTLLEDSSSSKHYTEYQQQQHHNHHPVQHQSHHQWFNNNNNYQTSEPNVTPISSNHSVSNMNNPLDGSEVSKYLDLDSCKREQNIDIIVGDRVTVPPPPPPSSSTSCSFNGATDNSMAGICSTAATLNIRTDEKMPAKGEISEQESNCDIDNSWSQPMYGDISARFFKTTFPGIFPQDNGWNHEEYFTVQDLSASTTAQATTSASNRLKSFEPTNSSSNNNSSGMPIFSQNSNDNCNIDVMPSTSAKIRKRRKRSSQDGKTSQANGKRMQPTSTVTSQQMMMQHQTEIPGVEFNFQHQHHLQQQNLQQPSTSTAFLAGPSNASTALTSGFMMQQQQQHPQQQQAQPQQHQTQQKQRTKVYECGHCNAKYSKLKDRNAHMVDVHNYIRQNRRLVCPATGLATPLTNSDMHDPALPTTSAAGSMLVTPLQNADCAGDYKQSIVKIENENIQRDLTGVEPINANISAKTEIMEDDKLNLALVPMNSANGDANLEYDTKPPTNSLPLSLTTPTSKLTTLYRMLVSFNMTTLKQNQSLSEFDENLIKSSIFFCYICRQNFNSVKFYDAHLTEHPAECFTCGKKFQRWKNFSLHLKRHLGWKEFGCTVCDKKFVVRSALVEHMRMHSGLSPLKCKVCGKHFKRYSNLTQHRKRHSKQIVRRKEYVCYCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFVHVNSLRRHIRLAHSDKFDYTEPMECPICKQIFAKASMKAHMATHSTETQYDCAICSKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVREVDFKNHMNSHKQIKPYTCEVCGCKFIRKYNYMRHRREHHGNKKYTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00922372;
90% Identity: -
80% Identity: -