Agra005603.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aldrichina grahami
Gene Symbol
-
Assembly
None
Location
Contig140:809445-903639[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.019 0.76 9.9 3.7 1 23 1214 1237 1214 1237 0.96
2 22 1.3 52 4.1 5.7 1 23 1244 1267 1244 1267 0.97
3 22 2.7e-05 0.0011 18.8 0.9 2 23 1298 1319 1297 1319 0.97
4 22 0.19 7.7 6.7 1.1 2 23 1427 1448 1426 1448 0.97
5 22 1.2 49 4.2 0.4 3 20 1458 1475 1456 1477 0.92
6 22 0.032 1.3 9.2 0.1 2 23 1494 1515 1493 1515 0.96
7 22 1.1 45 4.3 0.7 2 20 1528 1546 1527 1549 0.93
8 22 0.007 0.29 11.2 0.3 3 23 1630 1651 1628 1651 0.95
9 22 0.0009 0.037 14.0 0.3 1 22 1658 1679 1658 1679 0.95
10 22 0.5 20 5.4 0.3 2 21 1691 1710 1690 1714 0.89
11 22 0.11 4.4 7.5 0.9 1 23 1722 1744 1722 1744 0.95
12 22 0.11 4.4 7.5 0.2 2 19 1771 1788 1770 1790 0.93
13 22 0.0034 0.14 12.2 4.5 1 23 1847 1870 1847 1870 0.98
14 22 1.9 78 3.6 2.9 1 23 1907 1930 1907 1930 0.94
15 22 0.0041 0.17 11.9 1.6 2 23 1977 1998 1977 1998 0.98
16 22 6.3e-05 0.0026 17.7 0.7 1 23 2004 2026 2004 2026 0.98
17 22 0.0002 0.0083 16.1 5.2 1 23 2032 2054 2032 2054 0.98
18 22 7.4e-06 0.0003 20.6 2.5 1 23 2060 2082 2060 2082 0.99
19 22 0.0039 0.16 12.0 2.6 1 20 2088 2107 2088 2108 0.95
20 22 0.0013 0.053 13.5 0.1 3 23 2141 2161 2140 2161 0.99
21 22 1.6e-05 0.00064 19.6 2.3 1 23 2167 2189 2167 2189 0.99
22 22 8.6e-06 0.00035 20.4 2.8 1 23 2195 2217 2195 2217 0.98

Sequence Information

Coding Sequence
ATGGTTGAGATACAAAAGCCCAATTCAGCTTTAAAACGTCCGTCATTGAAACGTGAAACGGTTGTTGTCAATAATAGTGCACCCATGAAGAAGGTTACGCTGGTGCCAAAAGAGGAGGAACTGGTGGCCATTTCACCCGAAAGGCGTAATTGGCGTGGTATTTTTATAGCGTTACTGGTCATAGCAGCCGTATTTAGTTTAATTATATTCTCCATATTTTTATTATCGCCAGAGGATGAAGGCCTACGCATACGTGGCAGCAGATTAACAATTAGTGATATTTTAGGTAAACGCTTTCAATTGAAACCATTCAATGGCACTTGGTACAGTGACACTGAATTAGTATTTCGTGATCCCAGTGGTGGTCTATCAATAGTAAATTTAGATAATTATACAACACGAGTTTTTATGACCAATTCAACATTTCGCCAACTGAATGCTGAAACATATTTAGTAGCACCAGATCTTAAATATGTGTTGCTGCAGTCCGATAGTAATGCGGAGGGCTCAAGGCATCATGTCTATGAGGTACTAACAGCGAATACATTTCCCTTGGGACCAACTGAAAATATAGCTGAAGCACCACGCCTGCAATTTGTTTTATGGGCTCCTTACAACAACCATTTAATTGCAAGTGTTACTGGTGGTGGTGCCACCACAAATTCCCTTGCCTCTTCATCCTCATCCACTAATACTCAACCATCAACTCCAGTGCCCACGCCCACTAGCGGCAGTCCTCTATTGAATAGCCTAGGCAGCGGGGCAAGTGTAGCGAATTTAGTTAAACCTCCGCCACCCATACAGCTGCAGCAACAAAATCAAGATGCCTCAATTTCAACACTAAATAATGGTTTGCCGAAAGCTTTGTCCCAAAATCAAGCCATTGCTTTTGTCCACGAAAATGACATCTACTATAAACCTAAAGTTCAGGGAGAACTTGTGTGTCGCATTACAACAACTGGTCAAGCTGGCATTGTTTACAATGGCATACCAGATTGGACATATGAAAATGTACCGGAATTGGATAGTCGTGGCGGTAGTATGGCATTTTCACCGGATGCTTTATATTTGGCATTTCTTACATTTAATGACAGTGATGTCAGCGAATACAAATACACTTGGATGGGTGATGATTTAAAATATCCAGCTGTTCTCACACAACGTTATCCCAAAGCAGGCTCTGCTAATCCCAATATAACTGTTAATATCGTTAATCTATCCGTCCTTAAATACATCTTTCCCACACAAATCAAACTTCCACCAGAACTGGCTAATGGCAGCTATATTGGTGGCCTGACATGGGCCACGCCCATTGATCTCTCGGTCACCGTAACAAATCGCGCACAAACCAAAGCCCATACGGTGCTTTGTAGAGCTCCCGAGTTTCTTTGCAACATCGCACACACCGAAGTAACGGTCAATGATGGTTGGGTGTTGCCGGCGGAACGGCCCATATTTTCGGCCAAACTAAATAATCAATTGAAAAATCAATCAAACAGCACAAATATTAATGAAAGCTTCCAGAATATAACGAATGGTCAAACAACTTACGAAATACCCAATGGTGGATATTTACTTAAACGTCTTCCGGTGCGAGATGGTGAACATGGGCATTTTCGGCATGTGGTTTTTATTTCATCGGTGGACCGTAGACCGGTTCCCCTGACAATGGGCCGCTTTGAGGTAACTGAAATTGTTGGTTGGGATGAGGCCAATGAAATTGTCTACTTTATGGCTGCTCCTGAGAAGCGACCTGGTGAAAGGCACCTCTACAAGATCAGCCTTAAGTTGAATGTTACAAAAACGAATCGCACCTACATCACCTCATCGCAACCCACATGTCTGACGTGCGACAATACGCCCAGCACATTTAAACTGAACAATGGTCGTCCGGCCAAAGAGCCCCAAGATGTGGACGACGACGAAGAGGAATGCGTCTACATTATACCCAAAAACTGTCTCTACAATAAAGTCTATTTTAGCAAAGATTTTTCCTACTATGTCCAGGAATGCTTGGGTCCCGAATCGCCCAGTGTTTACTTGGTAGACACCCAAACCAATCTGAAGACAATCATAAGAACGTTTAATGTGGAAATACGTCATGGTTTTCATGCTCAGGTGAAACTGTTTCTGCCGCCCGGCATGAAAGAGGACGAAGATGTGGCTTTTCCCTTGATTTTGCAAATCGACGCTTCGCCCGGTTCACAATTGGTTAACGAACGCTTTCAAGTCAATTGGAATTGGTATTTGTGTAGTCAGCGTTCCTTTATTGTGGCGCAAATAGATGGACGTGGTAGTGGCTACCAAGGTGAACTGCTGCGTACCCAAGTTCACGGTAAACTGGGTACGGTAGAAGTAGAGGATCAATTAGCAGTATTAACTTACCTGCGTGACAATTTGAAATTTATTGATCCCTCACGTATCTGTGCTTATGGTTGGGGTTATGGTGGCTATGCCACAGCCATGACTTTAATCGATGATTCCCAGCAGGTATTGCAATGTGGTGTCGCTGTTAATCCTATAGCATCATTTGGTTATCATTATTCTTTTTTTACGGAACGGTATATACCGCTGAAAGGCGACTATTTGCGGGCGCTGCAAGAAGCCGATTTAACAATGAAAGCTGGCAACATTAAGGGTAGAAATTTAATGTTGATTCATGGCACAGCTGATACATTTGTGCATCAGGATCATACGCTGATGCTGGTGAAAGCTTTAGTTGATCAGGAGGTTAAATTTAGGCATCAGGTGTATCCTGATGAAGATCATTTAATGTTAAAATCCTTAAATCATGTCTACCAAACCATGGAATGGTATTTTGATGATTGTTTTGGTCCCAACGATGACAGACAATCAGTTTACTCCCTTACAGCTGAATGCAGTAACTCAAAAACCTGGCGTGATTTATTAAAGGAAATTGCTCAGTTTCAGGCAATCGAGGATGAGATACTACTCCCAAGGACTGTGTGCTGCAAATGTTTGGATAAGCTTATAAGTTTCTATGATTTTATACTGCAGATACATAATGTGAATAAGAAATACTCTCAATTATTGGGAAGATGTAAGGATGGTGTTTCAAATGAAATTGACAATTTTACTGATTGTTTGGCAGAGTCTGCTAATGCTTTGCCCTTGGAGATGTTAATGCCGGAGATTAAATTGGAAGAAGAACAGGTTGTTCCATACGACATTGTTTACAGTGACAACAATAAACTGCAAAAATTGGAAAATACAGATGCTCATGACCCTTTTATGGAAACGTGTGATGAAGCTATAAATTCAATGTCAGTGCAATTGGAAGAAATCCAAAGATCACTAAATGAACAAAATCATCAAAGTTCAAATGATGACGAAAATAAATTCAGCTCCTCATCGTCCGATGAAAGTGATTACTTGCCTAAAAACTATATTTCAAAAAGCCAACCGAGCGAACAAACTACTTTGAGACAGATTCAGACGACATCATTTAAGTTGCAAAAAAATTGTCGTCGACATATAAAAGCCGCACACTCTAGACAAAATGAAGATAGCTCCTCGTCATCCAATGAAAGTGATTATGATTATGAGTCAGCCTTTAGACAACAAATCCCACTAAAAAAAGGTTCAGAAGGTGATAAGATCGAAAAAGTCAACAATCGTTTCGTATGTCTTATATGTAAAAAAACATTTACGTTGCGAAAAAATTGTCGTCGACATATTATTATTAAACACTCACAAGAAACCATATTATATTCTTGCGGTTTCTGTGATCAACATTTTAACTGTAAGGTATACTTACAACTACATCTTAAACGTATGCATCCAGGCGAATCACTCAGTTCAAACTCTAAGCATATACAACAATTATTTGGAGATCGTTTATACAGCAAGCCTGCAGCTTGGTGTCTGGTAGAATGTAAATTGTGTGATACAACATTTACAACAGCTAAAGAACTTCGTCAGCACTTGAAAAATCACAGGGATGTAAGCTCTCTTCATGGCTTAGACTTGGACAGTAGCATTGTCCAACATTTATTTCCAGAAAATATTGATTTGGACGATCTCAAGGAAAGTATTTGCAATGATATTCTTAAGGAAGATTGGTTCAAATATTACACAGTGTTAAATGAAAATTTTTATGAAATGTCTGTTAGTGATACAGAAGCTGAAGATTTGCTAGAAGAAACAGCAGAGCGTGTTGGCAAGTACAAGTGTGAATTGTGTTTTGAAGATTTCTTGTATAAATACCAAGTTTTCTGCCATTTAAAAGAATTCCATAACGAAGAAGAAATCCCTTTGAAATGTAGCCGATGCAAATTGGAATTTATTTCAATAAAAATGTACGAAGATCACAGACAAACTCATTGCCGAAATAAAAATAAGGTTTTGTTTTGTCCAAGTTGCCCGGCCAAGTTTGTTTGGCCGGAAAATTTAAAAAAACACAAGTGTGCCTCAAAAATACCACCGGAGAATTGGCCCACTATTACAAAAGATCAACTAAAATGTAACATATGCGAACTGGAATTTGAGGAAAAGGCACAATATATAGAGCATTTAGGGACACATAGTATTTGCAGGACCGCATCTGCAAAAGCGATAATACGTTGTGGACTTTGTGCACAATATTTTCAAAAACTTGAACATTTACGTCAACACATGCCGTTGCATGCCGATGGCGTAACTGGTATTGACTTTAAAGACTGTATTTATGTAAAATGCTTTGAACGTACCAAATCAATTGATTTAGTGCCACTGCAGCTGAAGATTCAAAATGCCTACATTAAATCTCAAATTAGTTGTTTCTACCAAGCCATCGATAAGTACGGCAATGAACTAGACCTTTCAGACTCAGATAGTAACACAGACGAGGATGCAGATGATGGTCAACAAATAAAAAGACAATATGGGTGTGACATTTGCAACGAAATCTTTGCAAAACGGAAACTTCTATTAAACCATCAACAAGAACGGCACAATAATGTACCGCTGCCCTTTACGTGTAAGGACTGTAATCAGCCATATGTTAGTCTTGATTTGTTGCAACAGCATTTGAAAAGGGTTTGCTGGAATGAACACCGACGAATAGCTCAACAATGTGATTACTGTAAGGCTCGTTTTATATGGCCAAATAATCTATTGAAACACAAAGAAATACAGAATCACATGACAACCGATGTGCAACTTCATTACTGTCTTCTGTGCCCAAAAACTTTCTTTAGTGTTGAAGATGTCAAAGAGCACTTAGGTCGACATTGTGTAACAGCAGCTGAGGTCAAGACCGTTGAATGTATAGTAAATTCTACATGGTGGCCAAATGGTGACAAAACAATTAAATGTAAACTATGTGGCCTAACATTTGAAACAATGGCAAAATTAAGTGAACATTTTTCACCTACAAATCCACATACATCGTGTGCTAATTCGCATTCACTGGCGAATTACTCGATTACAAATGAAAAAGGATTCGAATTGCATTTAGAACTGGATTCTGAAACAGAAGCAGAAGATGAGCAAGAAGCGGATGAACATAAAGGAGACGATATAAAGACTTTATATCCCTACAGCTGTTGCATGTGCAGTAAGTCGTTTATGCGAAAATATCAAATAGCTCAGCATCAGCGATCTATGCATAATTATGAATTGCTACAGCTAAAATGTGAACGTTGTATTTTTAGAACAGTCTCACAGGAATTTTTAGATTATCATAAAGTTACCCAGTGTTTTAACGATGAAAAGATTTACGAATGTGATCAGTGCCATTTTAAATTTATGTGGCAAGAGAATCTTGATAATCATCATGCTATATTTCATACTCCCAAAGAATGGGGAAAAACAACATATGTAGCGATTTATAATCAGTCTGCGCCAATCGAGAGCAATAACATGGAGTCATCATCAGACATTGACAAGGCAAAAGTTAGCGGACCATCCAGAACAAGAAAAGGAGAGACATGTACAATTTGTGGGGTGTACTTCCAAGACCGCACACATATTAAGGTACACATGATGAGGCATATGGGCGAGAAACCGTTCAAATGTGATCTTTGCAAAATGGCCTTTACACGCAATGCCGATTTAAAGGATCACCGAGTCACACACACTGGCGAACGTCCCTTCAAGTGTCTATATTGCGATAAAGGATTTACGCGACAATGCAAATTACGAGAACACACGCGTCTGCACACTGGCGAACGTCCCTACCAGTGCACAATTTGTCAGAAATCATTTAACAAATCGGGCTATCTGAAACTCCATTTGCGTTATCATACTGGCGATAGACCCTTCAAGTGTGACATTTGCGGTAAAAGTTTTGTATGTTCCAACTATCTGAAAAAGCATCGTGACTGTACAGGCCACAACAAATTGTTCTCAACGCCAGCCAACATTTCCAATTCAAATATTTCCGAACAGCCAAGTTCAAGCGAGGGAAAGAAATCATTATGTCCCATTTGTGGAATATACTTGTCGTCCAATACAAGTCTAACATTACATGTTAGAACACACACGGGTGAAAAACCCTTCAAGTGTGATTTTTGCGAAAAGGCCTTCGTACGTAAAACCGATTTACTTAATCACCGACGAAAACACACTGGTGAACGGCCCTACAAATGTACGATATGCGGTAAAGCATTTACGCAAAACTGTAAATTAACTGTTCATAACCGCATACACACCGGAGAAGCGTCCCTACAAGTGCAAGTTTTGTCAGAGAACATTTACGAAATCGGACTCACTAAGACTACATTTGCGTAA
Protein Sequence
MVEIQKPNSALKRPSLKRETVVVNNSAPMKKVTLVPKEEELVAISPERRNWRGIFIALLVIAAVFSLIIFSIFLLSPEDEGLRIRGSRLTISDILGKRFQLKPFNGTWYSDTELVFRDPSGGLSIVNLDNYTTRVFMTNSTFRQLNAETYLVAPDLKYVLLQSDSNAEGSRHHVYEVLTANTFPLGPTENIAEAPRLQFVLWAPYNNHLIASVTGGGATTNSLASSSSSTNTQPSTPVPTPTSGSPLLNSLGSGASVANLVKPPPPIQLQQQNQDASISTLNNGLPKALSQNQAIAFVHENDIYYKPKVQGELVCRITTTGQAGIVYNGIPDWTYENVPELDSRGGSMAFSPDALYLAFLTFNDSDVSEYKYTWMGDDLKYPAVLTQRYPKAGSANPNITVNIVNLSVLKYIFPTQIKLPPELANGSYIGGLTWATPIDLSVTVTNRAQTKAHTVLCRAPEFLCNIAHTEVTVNDGWVLPAERPIFSAKLNNQLKNQSNSTNINESFQNITNGQTTYEIPNGGYLLKRLPVRDGEHGHFRHVVFISSVDRRPVPLTMGRFEVTEIVGWDEANEIVYFMAAPEKRPGERHLYKISLKLNVTKTNRTYITSSQPTCLTCDNTPSTFKLNNGRPAKEPQDVDDDEEECVYIIPKNCLYNKVYFSKDFSYYVQECLGPESPSVYLVDTQTNLKTIIRTFNVEIRHGFHAQVKLFLPPGMKEDEDVAFPLILQIDASPGSQLVNERFQVNWNWYLCSQRSFIVAQIDGRGSGYQGELLRTQVHGKLGTVEVEDQLAVLTYLRDNLKFIDPSRICAYGWGYGGYATAMTLIDDSQQVLQCGVAVNPIASFGYHYSFFTERYIPLKGDYLRALQEADLTMKAGNIKGRNLMLIHGTADTFVHQDHTLMLVKALVDQEVKFRHQVYPDEDHLMLKSLNHVYQTMEWYFDDCFGPNDDRQSVYSLTAECSNSKTWRDLLKEIAQFQAIEDEILLPRTVCCKCLDKLISFYDFILQIHNVNKKYSQLLGRCKDGVSNEIDNFTDCLAESANALPLEMLMPEIKLEEEQVVPYDIVYSDNNKLQKLENTDAHDPFMETCDEAINSMSVQLEEIQRSLNEQNHQSSNDDENKFSSSSSDESDYLPKNYISKSQPSEQTTLRQIQTTSFKLQKNCRRHIKAAHSRQNEDSSSSSNESDYDYESAFRQQIPLKKGSEGDKIEKVNNRFVCLICKKTFTLRKNCRRHIIIKHSQETILYSCGFCDQHFNCKVYLQLHLKRMHPGESLSSNSKHIQQLFGDRLYSKPAAWCLVECKLCDTTFTTAKELRQHLKNHRDVSSLHGLDLDSSIVQHLFPENIDLDDLKESICNDILKEDWFKYYTVLNENFYEMSVSDTEAEDLLEETAERVGKYKCELCFEDFLYKYQVFCHLKEFHNEEEIPLKCSRCKLEFISIKMYEDHRQTHCRNKNKVLFCPSCPAKFVWPENLKKHKCASKIPPENWPTITKDQLKCNICELEFEEKAQYIEHLGTHSICRTASAKAIIRCGLCAQYFQKLEHLRQHMPLHADGVTGIDFKDCIYVKCFERTKSIDLVPLQLKIQNAYIKSQISCFYQAIDKYGNELDLSDSDSNTDEDADDGQQIKRQYGCDICNEIFAKRKLLLNHQQERHNNVPLPFTCKDCNQPYVSLDLLQQHLKRVCWNEHRRIAQQCDYCKARFIWPNNLLKHKEIQNHMTTDVQLHYCLLCPKTFFSVEDVKEHLGRHCVTAAEVKTVECIVNSTWWPNGDKTIKCKLCGLTFETMAKLSEHFSPTNPHTSCANSHSLANYSITNEKGFELHLELDSETEAEDEQEADEHKGDDIKTLYPYSCCMCSKSFMRKYQIAQHQRSMHNYELLQLKCERCIFRTVSQEFLDYHKVTQCFNDEKIYECDQCHFKFMWQENLDNHHAIFHTPKEWGKTTYVAIYNQSAPIESNNMESSSDIDKAKVSGPSRTRKGETCTICGVYFQDRTHIKVHMMRHMGEKPFKCDLCKMAFTRNADLKDHRVTHTGERPFKCLYCDKGFTRQCKLREHTRLHTGERPYQCTICQKSFNKSGYLKLHLRYHTGDRPFKCDICGKSFVCSNYLKKHRDCTGHNKLFSTPANISNSNISEQPSSSEGKKSLCPICGIYLSSNTSLTLHVRTHTGEKPFKCDFCEKAFVRKTDLLNHRRKHTGERPYKCTICGKAFTQNCKLTVHNRIHTGEASLQVQVLSENIYEIGLTKTTFA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-