Basic Information

Insect: Aldrichina grahami
Gene Symbol: -
Assembly: None
Location: Contig140:793152-806458[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 34 1.4 59 3.9 1.8 3 23 260 281 258 281 0.89

2 34 0.00011 0.0044 16.9 1.2 2 23 362 383 361 383 0.97

3 34 0.02 0.81 9.8 0.8 1 23 460 483 460 483 0.96

4 34 0.41 17 5.7 0.8 2 23 491 512 490 512 0.96

5 34 3.1 1.2e+02 2.9 0.7 2 19 521 538 520 540 0.92

6 34 0.0002 0.0082 16.1 1.1 2 23 557 578 556 578 0.97

7 34 0.02 0.81 9.8 1.0 2 20 591 609 590 612 0.94

8 34 0.0074 0.3 11.2 0.5 3 23 672 693 670 693 0.94

9 34 0.0018 0.075 13.1 0.8 1 22 700 721 700 721 0.95

10 34 1.8 74 3.6 0.4 2 23 733 755 732 755 0.91

11 34 1.2 50 4.2 7.4 1 23 768 790 767 790 0.92

12 34 0.044 1.8 8.7 0.3 2 20 817 835 816 837 0.92

13 34 0.0004 0.016 15.1 7.9 1 23 891 914 891 914 0.98

14 34 0.023 0.95 9.6 1.4 1 23 951 974 951 974 0.97

15 34 9.7e-05 0.004 17.1 0.3 2 23 1014 1035 1013 1035 0.98

16 34 6e-05 0.0024 17.7 1.3 1 23 1041 1063 1041 1063 0.98

17 34 0.00066 0.027 14.5 0.5 1 23 1069 1092 1069 1092 0.98

18 34 0.0001 0.0043 17.0 1.1 2 23 1132 1153 1131 1153 0.98

19 34 0.0039 0.16 12.0 4.1 1 23 1159 1181 1159 1181 0.97

20 34 0.00049 0.02 14.9 0.4 1 23 1187 1210 1187 1210 0.98

21 34 0.0011 0.043 13.8 0.3 2 23 1265 1286 1264 1286 0.98

22 34 1.8e-05 0.00074 19.4 1.9 1 23 1292 1314 1292 1314 0.99

23 34 0.0074 0.3 11.2 0.6 1 23 1320 1342 1320 1342 0.98

24 34 3.4e-05 0.0014 18.5 3.7 1 23 1348 1370 1348 1370 0.99

25 34 0.00026 0.011 15.7 0.7 2 23 1619 1641 1618 1641 0.96

26 34 8.7e-05 0.0036 17.2 2.2 2 23 1651 1673 1650 1673 0.96

27 34 0.0037 0.15 12.1 2.8 3 23 1696 1717 1695 1717 0.97

28 34 0.0003 0.012 15.5 1.7 2 23 1727 1749 1726 1749 0.96

29 34 0.00048 0.02 14.9 0.6 2 23 1758 1780 1757 1780 0.97

30 34 0.0054 0.22 11.6 3.5 1 23 1786 1808 1786 1808 0.96

31 34 0.0004 0.016 15.1 0.2 1 23 1814 1836 1814 1836 0.97

32 34 0.077 3.1 7.9 0.4 3 23 1844 1864 1843 1864 0.98

33 34 0.00082 0.034 14.1 0.3 2 23 1870 1892 1869 1892 0.94

34 34 0.3 12 6.1 1.8 1 23 1898 1921 1898 1921 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	34	1.4	59	3.9	1.8	3	23	260	281	258	281	0.89
2	34	0.00011	0.0044	16.9	1.2	2	23	362	383	361	383	0.97
3	34	0.02	0.81	9.8	0.8	1	23	460	483	460	483	0.96
4	34	0.41	17	5.7	0.8	2	23	491	512	490	512	0.96
5	34	3.1	1.2e+02	2.9	0.7	2	19	521	538	520	540	0.92
6	34	0.0002	0.0082	16.1	1.1	2	23	557	578	556	578	0.97
7	34	0.02	0.81	9.8	1.0	2	20	591	609	590	612	0.94
8	34	0.0074	0.3	11.2	0.5	3	23	672	693	670	693	0.94
9	34	0.0018	0.075	13.1	0.8	1	22	700	721	700	721	0.95
10	34	1.8	74	3.6	0.4	2	23	733	755	732	755	0.91
11	34	1.2	50	4.2	7.4	1	23	768	790	767	790	0.92
12	34	0.044	1.8	8.7	0.3	2	20	817	835	816	837	0.92
13	34	0.0004	0.016	15.1	7.9	1	23	891	914	891	914	0.98
14	34	0.023	0.95	9.6	1.4	1	23	951	974	951	974	0.97
15	34	9.7e-05	0.004	17.1	0.3	2	23	1014	1035	1013	1035	0.98
16	34	6e-05	0.0024	17.7	1.3	1	23	1041	1063	1041	1063	0.98
17	34	0.00066	0.027	14.5	0.5	1	23	1069	1092	1069	1092	0.98
18	34	0.0001	0.0043	17.0	1.1	2	23	1132	1153	1131	1153	0.98
19	34	0.0039	0.16	12.0	4.1	1	23	1159	1181	1159	1181	0.97
20	34	0.00049	0.02	14.9	0.4	1	23	1187	1210	1187	1210	0.98
21	34	0.0011	0.043	13.8	0.3	2	23	1265	1286	1264	1286	0.98
22	34	1.8e-05	0.00074	19.4	1.9	1	23	1292	1314	1292	1314	0.99
23	34	0.0074	0.3	11.2	0.6	1	23	1320	1342	1320	1342	0.98
24	34	3.4e-05	0.0014	18.5	3.7	1	23	1348	1370	1348	1370	0.99
25	34	0.00026	0.011	15.7	0.7	2	23	1619	1641	1618	1641	0.96
26	34	8.7e-05	0.0036	17.2	2.2	2	23	1651	1673	1650	1673	0.96
27	34	0.0037	0.15	12.1	2.8	3	23	1696	1717	1695	1717	0.97
28	34	0.0003	0.012	15.5	1.7	2	23	1727	1749	1726	1749	0.96
29	34	0.00048	0.02	14.9	0.6	2	23	1758	1780	1757	1780	0.97
30	34	0.0054	0.22	11.6	3.5	1	23	1786	1808	1786	1808	0.96
31	34	0.0004	0.016	15.1	0.2	1	23	1814	1836	1814	1836	0.97
32	34	0.077	3.1	7.9	0.4	3	23	1844	1864	1843	1864	0.98
33	34	0.00082	0.034	14.1	0.3	2	23	1870	1892	1869	1892	0.94
34	34	0.3	12	6.1	1.8	1	23	1898	1921	1898	1921	0.97

Sequence Information

Coding Sequence: ATGAGCAACAATAATAAAAATGAGTGTTTTATAAATGGAATTCAATATAAGTGTCGTACTTGCTTTGATCCAGGACAAGCTGTTTACTCCCTAACAGATGAATGCAGCAACTCAAAAACTTGGTGTGATTTATTAAAGGATATTGCCCAGCTCCAGACCAACGAGGACGATTTATTCCCAAGGACTGTATGTTGCAAATGCATGGATAAACTTATTAGTTACTACGATTTTAAACTTCAGATACATAATGTAAATAACAAATACTCTCAATTATTGGCAAGTAGTAATAATAATACAACGCAGGGAAGAATTTTAAATGAAATTGATAATTTTAAGGATTCCTTAAAAGAATCTTCTAATGTTTCGCGGCAAAATTCACCAGAAATAAAATTGGAGGAAGAACAGGTTATTCCATATGACATTGTTTTCAGTGACAAAAATAAATTTCATGGAGAGAGTAATGAAAAATTGGAAAATAATGACGTTCTTGGACTTTATACGGATACCTGCAATGAGTCGATCAATTCGATCCCAGAAATCCCTAGATCTATAAGTGAACAAAGTAATCAAACATTAAACGATGACTACAATGATGACGGAAATGAATCGAGCTCTTCATCGTTTGATGAATGTGATAATGTGCCTCTAAAAAGATTGAAGAATGAGAAAAGAAACACCAATATCATTACAACAGTCAACAGCCAAGCCATCGAAGGAAATGTATTTGAAAAGGATTCAGACTATGATCTAATCGAAAAAATTAACCGTCGCTTTCTATGCATCATATGCAAAAAAGCATTTTCATTAAAAAGAAATTGTCTACGGCATATAAAAGCAATACACACTCGTCTAAATGAATCTAGGCAGCCAGACGATCAGAAAACTGCTGAAGAACATGTTACACTCGAAAAAGACAGAATATTCCCTTGTGCATTTTGTAAACAACATTTTAACTGCAAGGACTATTTACAAATGCATCTTACATATATGCATCCATTCGAATCATTAGATTCGAACACTAAGTTTATAGAACGATTATTTGGAGATCGTTTATACAGCAAGCCTACAGCTTGGTGTCTGGTAGAATGTAAATTGTGTGATACAACATTTACAACAACTAAAGAACTTCGTCAGCACTTAGAAAAACACAGTGATGTAAACACTCTTCATGGCTTAGACTTGGACAGTAACATTGTCCAGCACTCATTTCCAAATACAACCGATTTAAATATTGTGAAGAAATGTATATGCAATGATATCCGTGAGAAACGTTGGTTCAAGTATTACACCGTTTTAAATGAACATTTTTATGAAATGTCTGTTAGCGATACGGAACCCGAAGATTTGGTAGAAGAAAATGTAGAGCGTACCGGAAAATACACGTGTCAATTGTGTGCTCAAGGTTTTTCGTATAAATATCAAGTTTTCTCCCATTTAAAGGAAGCTCATAACAAGAAAGAAATTTCTTTGAATTGTAGCCAATGCAAATTGGAATTTATTTCAATAAAAATGTACGAACTACATAAACAAACACACTGCCGAAATAAACATAAAATTTTGGTTTGTCCACATTGTCCAGGTAAGTTTGTTTGGCCGGAAAATATGAAAAAACACAATTGTGCCAGGAAAGTACCAGTAACTATAGCTGCAGTTACCAAGGATCAATTAAAATGTAACATATGTGATCGTAAATTTGAGGAGAAGTCAAAATATCAAGAGCATTTAGAGACACACAGTAATGACAGAGCCATGTCTGCAAAAACTATAATACGATGTGGTCTTTGTACAAATTCCTTTGAAACACTTCAACACTTACGTAAACACATGCCGTTGCATGCCGATGGCGTAACTGTGCCACTGCAGCTGAAGATTCAAAATGCCTACATTAAATCTCAAATTAGTTGTTTCTACCAAGCCATCGATAAGTACGGCAATGAACTAGACCTTTCAGACTCAGATAGTAACACAGACGAGGATGCAGATGATGGTCAAAATGTAAGAATACAATACGGCTGTGACATTTGCAAAGAAATGTTTGCAAAACGGAAACTTCTATCAAACCATCAACAAGATCAGCACAATAATGTAACACTGCCATTTACGTGTAAGGAATGTAATCAGCAATATGTTAGTCTTAATTTGTTACAACGACATTTAAAAAGAGTTTGCGGGAATGAACATCGTCGAATAGCTCAACAATGTGATTATTGTAATGATCGCTTTATATGGCCTAATAATCTGTTGAAGCACAAGGAATTACAGCATCCCATGATCTCCCAACCTTCCGTCAGTGTTCAACATCATTGTTGTCTGCTGTGCCCGAAAAGATTCACCAGTGTTGAACACGTCACAGATCACTTAAGTTACCATCGTTTGACATCCGCTGATGTCAAGACCGTTGAAAGTATAGTAAATTCGACATGGTGGCCAAATGGTGACAAAATAATTAAATGTAAACTATGTGGCCTAATATTTAAAAATATGACCAGTTTGAGCGAACATTTTTCACGTACAAATCCCCAAAATTTGTGTGCCAATTCGCATTCACTGGCAAATTACTCAATTACAAATCAAAAAGGATTCGAATTGCATTTAGAACTGGATTCTGAAACAGAAGTAGAAGATGAAAAAGCGATATGTAATGAGGAGGTTAAGAAACATTTATTTTCCTATAAGTGTTGCATGTGCAATAAATCGTTTAAGCGAAAATATCAAATAGCTCATCATCAGCGATCAATGCACAACTATGAACAGCTAAAGCTAAAATGTGAACGTTGTGTTTTTAGAACAGTCTCACAGAATGTTTTAGACTATCATAAAGCCACGCAGTGTTTTAATGTTGAAAAGCAATATGAATGTAACCAGTGCCATTTTAAATTTATGTGGCAAGATAATCTTGATAATCACATTAACATGATTCATATTTCAAAAGAATTGGCTAAAGCGAAGAATGTTAAAATTTCTAAAGAGTCTGTACCAACCAACAACACATGCGATACCATTAACAGTGACTCGGGAAATTTTCCAAAAGGGAAAAAGAAATGTCCCATATGTGGGATCCAATTGTCGATCCAATCAAGTCTTACGTATCACATGAGAACTCACACAGGTGAGAAGCCCTTCAAGTGTGAGGTGTGCGACAAGGCCTTTACACGTAAAAGCGTTTTAGATTATCACCGACTCAAACACACTGGCGAACGTCCCTACAAATGTACGCAATGCGGAAAAGCATTTTTGAAAAAAATCAAATTAGCTAATCACATCAACATGATCCATACTTCAAAAAAATTGTCTAAATCCAAGGATGTTAAGATTTCTAAAGAGTCTCTACCAACCAACGCATGTATGGACAATTTAAATATTTCCGAACAACCCAGTCCAAAAGCAAAAAAGAAATGTCCCATTTGTGGGATCCACTTGTCGATCCAATCAAGTCTTACGTATCACATGAGAACTCACACGGGTGAGAAACCATTCAAGTGTGAGTTGTGCGACAAGGCCTTTACACGTAAAAGCGTTTTAGATTGTCACCGAAGGAAACACACTGGCGAACGTCCCTACAAATGTACGCAATGCGGAAAAGGATTTTTGCAAAAAATCAAATTAGCTAATCACATCAACATGATTCATACTTCAAAAGAATTAGCCAAACCATCGGATGTTGCAATTTCTAATGAGTCTGTTCCAATCAACAATACATGCGATACCAATATTATCGAAAATATAACGGACAAATTTCACAAGATTTCTAGATCAAATGTTTCTGAAGAAACCAGACCAAAAGGGAAAAAGAAATGTCCCATTTGTGGAGTTTACTTGTCGATCCAAACAAGTCTTACGTATCACATGAGAACTCACACAGGTGAGAAACCATTCAAGTGTGAATTTTGCGAAAAGGCCTATTCACGTAATAGCGCTTTAGAATATCACCGACGCAAACACACTGGCGAACGTCCTCACAAATGTTCGCAATGTGGAAAAGGATTTTTGGAAAAAGGAAGATTAGCTGATCACATACGCATACACACTGGCGAATATCCCTACCAATGCAGGTTTTGTCAGAAAAGATTCAGAAAAGCGGATTATCTGAGACTGCATTTGCGTACTCATACAGGCGAGAATCTTTGTAGCCATATTATAAACGAATGTTTTATAAATGGTGTTCAGTATAAATGTCGCACTTGCTTTGATCCAGGACAAACAGTCTATCCCCTTACAGATGAGGCCAACAGCACAAAAACTTGGCGTGATTTGTTAAAGGAATTTGCTCCTTTGCAGACAAATAACGACAGTTTACTTCCAAATACCATGTGCTGCATATGCTCGGAGAAACTTCAAAGCTCCTACGATTTTATACTACAAATTCATAATGTGAATAACAAATACTCAAAATTATTGGAAGAATGTAATGAAATGTATACTTCTACCGATTGCTTGGCAGAATCCACCATTGACTTGCCATTGAAAGTGGTTATGCCGGAAATTAAGTTGGAGGATGAACTGGTTAATCCATATGAAATGGTTTTAAATAACAACAATGAATTGGGTGAAATTCCTGCAACAATATTTAAAAATGAAGACACTGATGATGATGATGATCCCTTTACGGATACTTATAATGATGATCACGAATCCACTTCAGACCAATTGGAAGAAAGTGGAGCAACAGCCGAAGAAAAAACAACAAATACAGATGTTAAACAATCAGAAGAAGGCGAAGACTTGCTCCGCAATCGTAAAATACTTACTAGAAAAGCTAAACATCAACAACCAAATACTACAACAAATAAAACTCCGAATATTTCACACGCTGAAATAATGAAAAATCTTGAAAATGTTGGAAAAGATTCCATTGTTTGCGAACTATGTTCAAAAATATATGCTACTAAGTCTAAATTTAAAAGACATCTACAAAGAGTACACCCGCCAGATGATATAATAGGACCAATTACTTGTGAAACATGTTCGAAAACATTTGCCACTACGTATAAACTTAAAAGACATCAGCAAAGAATGCATCCAGAGATATATAAAACAGCTAACAAACCGAGGAGTATTCATAACGATGTAAAAGGACCAGTTGATTGTGAAAAATGTTCCAAGACATATGATAATAGGCTCAAATTTAGAAGACACCAAAGAAGAGTACATCCCGAGGAATTTGTAAATGAAGAGATTGTTTGCGAAAAATGTTCGAAATCATTCGAAAATATGTACAAATTTAGAAGACACCAACAAAGAGTGCATCCAGAACCGAATCAAGAGATCAACAAGTGTCCGCTATGCTCAAAAGAATTTAAAAATAAATTCTATGTAAATGAACACATTAAAGTCGTACATGATAAAATAAAGCCGTATAATTGTACGCATTGTCCAAAAACGTTTGCATCTGCCCATTCCAAACGAATTCATGAACTTTCTCACACAGACGATTTCCCCTATGCCTGCGAATGGTGCGACAAACGTTATCGATTACCCAGTAAATTGAAGATTCATACTGAAATTCATACAACCAAACCCGAACTTTTATGTCCCATCTGTAAAAGAAGCCAAAAGTCGGAGAAAGACTTGGAGGATCATGTGAAAAGTCACGATGACAATCGTTTACAGTGTCCATCGTGCGGCAACTTGTTTAGACGAAATTCTCAACTTAAAGATCACTACAATGCAGTTCACTTAAAATTGCGCCCCTATAAATGTGAATTTTGTGAATTAGGGTTTGGTGATCGAAAAACACGACGTATGCATGAAAGAAAATATCATCCAAAAGACCGGCCTGTACCAACGTGA
Protein Sequence: MSNNNKNECFINGIQYKCRTCFDPGQAVYSLTDECSNSKTWCDLLKDIAQLQTNEDDLFPRTVCCKCMDKLISYYDFKLQIHNVNNKYSQLLASSNNNTTQGRILNEIDNFKDSLKESSNVSRQNSPEIKLEEEQVIPYDIVFSDKNKFHGESNEKLENNDVLGLYTDTCNESINSIPEIPRSISEQSNQTLNDDYNDDGNESSSSSFDECDNVPLKRLKNEKRNTNIITTVNSQAIEGNVFEKDSDYDLIEKINRRFLCIICKKAFSLKRNCLRHIKAIHTRLNESRQPDDQKTAEEHVTLEKDRIFPCAFCKQHFNCKDYLQMHLTYMHPFESLDSNTKFIERLFGDRLYSKPTAWCLVECKLCDTTFTTTKELRQHLEKHSDVNTLHGLDLDSNIVQHSFPNTTDLNIVKKCICNDIREKRWFKYYTVLNEHFYEMSVSDTEPEDLVEENVERTGKYTCQLCAQGFSYKYQVFSHLKEAHNKKEISLNCSQCKLEFISIKMYELHKQTHCRNKHKILVCPHCPGKFVWPENMKKHNCARKVPVTIAAVTKDQLKCNICDRKFEEKSKYQEHLETHSNDRAMSAKTIIRCGLCTNSFETLQHLRKHMPLHADGVTVPLQLKIQNAYIKSQISCFYQAIDKYGNELDLSDSDSNTDEDADDGQNVRIQYGCDICKEMFAKRKLLSNHQQDQHNNVTLPFTCKECNQQYVSLNLLQRHLKRVCGNEHRRIAQQCDYCNDRFIWPNNLLKHKELQHPMISQPSVSVQHHCCLLCPKRFTSVEHVTDHLSYHRLTSADVKTVESIVNSTWWPNGDKIIKCKLCGLIFKNMTSLSEHFSRTNPQNLCANSHSLANYSITNQKGFELHLELDSETEVEDEKAICNEEVKKHLFSYKCCMCNKSFKRKYQIAHHQRSMHNYEQLKLKCERCVFRTVSQNVLDYHKATQCFNVEKQYECNQCHFKFMWQDNLDNHINMIHISKELAKAKNVKISKESVPTNNTCDTINSDSGNFPKGKKKCPICGIQLSIQSSLTYHMRTHTGEKPFKCEVCDKAFTRKSVLDYHRLKHTGERPYKCTQCGKAFLKKIKLANHINMIHTSKKLSKSKDVKISKESLPTNACMDNLNISEQPSPKAKKKCPICGIHLSIQSSLTYHMRTHTGEKPFKCELCDKAFTRKSVLDCHRRKHTGERPYKCTQCGKGFLQKIKLANHINMIHTSKELAKPSDVAISNESVPINNTCDTNIIENITDKFHKISRSNVSEETRPKGKKKCPICGVYLSIQTSLTYHMRTHTGEKPFKCEFCEKAYSRNSALEYHRRKHTGERPHKCSQCGKGFLEKGRLADHIRIHTGEYPYQCRFCQKRFRKADYLRLHLRTHTGENLCSHIINECFINGVQYKCRTCFDPGQTVYPLTDEANSTKTWRDLLKEFAPLQTNNDSLLPNTMCCICSEKLQSSYDFILQIHNVNNKYSKLLEECNEMYTSTDCLAESTIDLPLKVVMPEIKLEDELVNPYEMVLNNNNELGEIPATIFKNEDTDDDDDPFTDTYNDDHESTSDQLEESGATAEEKTTNTDVKQSEEGEDLLRNRKILTRKAKHQQPNTTTNKTPNISHAEIMKNLENVGKDSIVCELCSKIYATKSKFKRHLQRVHPPDDIIGPITCETCSKTFATTYKLKRHQQRMHPEIYKTANKPRSIHNDVKGPVDCEKCSKTYDNRLKFRRHQRRVHPEEFVNEEIVCEKCSKSFENMYKFRRHQQRVHPEPNQEINKCPLCSKEFKNKFYVNEHIKVVHDKIKPYNCTHCPKTFASAHSKRIHELSHTDDFPYACEWCDKRYRLPSKLKIHTEIHTTKPELLCPICKRSQKSEKDLEDHVKSHDDNRLQCPSCGNLFRRNSQLKDHYNAVHLKLRPYKCEFCELGFGDRKTRRMHERKYHPKDRPVPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -