Agra005570.1
Basic Information
- Insect
- Aldrichina grahami
- Gene Symbol
- -
- Assembly
- None
- Location
- Contig93:1693909-1699486[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.063 1.1e+02 2.4 0.1 10 44 136 167 127 167 0.78 2 9 5.2e-06 0.0095 15.5 1.1 4 43 184 225 182 226 0.81 3 9 0.0032 5.7 6.6 2.3 16 43 232 253 229 254 0.81 4 9 1.1 2e+03 -1.6 0.0 18 26 351 359 342 366 0.84 5 9 0.036 65 3.2 0.7 7 35 399 426 395 431 0.76 6 9 0.00019 0.34 10.5 0.2 17 44 488 512 480 512 0.90 7 9 0.55 9.9e+02 -0.6 0.1 22 41 521 537 519 540 0.82 8 9 0.00091 1.6 8.3 2.4 16 43 543 567 534 568 0.89 9 9 0.01 19 4.9 0.5 6 28 567 587 566 596 0.83
Sequence Information
- Coding Sequence
- ATGGCATCAACAACATCGTGCCGTTTATGTAGTTTTACTTCTGAAGAATTTAAATGCTTATTTGACGACAATGGCCTGAAAAGTGAAGTTTATCAAATTGCAGTCAAATATTTCAATCCATCGCTCTTGAATTCTGGTACAGAGACTACTTTAAGGGTTATTTGTTTAGAATGCTGGCAACATATTAGCGACTTTCACAGTTTTCATCAGTGGATTCTTAATGCCCAGGCTCAACAGGAAGATATGGAATTGATCGTACATGAAGAAAAATCGGATGAACAGATTTCGACTCTTGAGTTTGATTTAATTGATGACACTAGAACATCGAAATCAAGTAACTCTACCAAATCAATTTCTTCGCCAATAAATTCGATAGAAAGTAAAGTAGAAAATTATGATATTTCCATAACAAAATTGAGGCGGAAGTTGGAATGCTATAAATGCAAGGACATATTTCAAAGTTTTGCTAATTTAGATGCTCATTTTCAACAATTTCATCCAATTGACCAATTTTATGTTATTTGTTGCAAAGAAAAATTTTATCAGAGATGGAATCTGTTTCAACATCTTCTTGGTTTCCACAAGCAAAAAGATGGAAATGCTTTTAAATGTGAAACATGTGGAGCTTCATTTTCACAATATGGAAACTTAAGAAGACATGTAAGAAGAAAACATACGGTACAACCATTACTTAAATGGATATGCAAATATTGTAATCAAATGTTTAAAAATCGATCACATTTAGAAAGGCACAAACATAAGATACATACTTCTCAGTTAAACATTGATTTACAATACGACTTAATGCAAAACGAAAATAAAAATGATGAAGAGGAATATCTAGATAGTTTCGAAATAGACTATGAACCAGAAGAGGATATTCAAGTGGATGCAAACGAAATTTCAAATCTTAATAAAAAGGAATCTATATTGAATGAATTTCGCTTAGAAAGTTCGGAAGCCAATAAAGATCTACAAAGTTTGGAACAAGCTTCTTATAATTTAGAAAAAGGATATGATGACTTCATAGCAAAATGGAAAGGGGATTTGGAATGTCCTAAATGTAATAAACACTTAATAAGTTACCCACAGCTAAGTGAGCATTTTGTTTTGGAGCATCCGGAAGAACGTTGTTATATTAACTGTTGTCACCTTACCCTTTATGAGCGTACAAGTATTGTTGAGCATTTACGTTTTCATGAAAACCCTAATGCTTTTGAGTGTTCAGATTGCGGAAAATGTTTTAAGAATAGCAAAGGATTGGGCTCCCATAAGCTACAAGTTCACAGTGACAAGAGAAGTACATATCATTTACATTTATGCTATTGCAAAAGAGCCAAAGAACTACATGCCGAAAATAAAGCTAAAGGACAACAAATAGAGTACAACACTGTTGTATGTTGCCAACGTAAAAAAAAAATATTAGAAGATGATGCCCTCATTGCAGAGTGGAAAAAAGATTTAACTTGCGAAATATGTAAAGCAACTTTCTCCTATTACTCCCTGATGCGTGCACATTTCTACCACAAACATCCAGGAGAAAAGTGCTATATTTTATGCTGCAATCGAAAAATATCTCGAATTTCTGATGCATTAGAGCATATACGTTCCCATTTGGACCCCCATGCATATCGATGCAAATTATGTGACATAACATTTTCTGGCAAAAGCACTTTGGCAAAACATATGCGCAATGCGCACATGGACTCTTTACCGAAACATAAATGGGCCTGTGATAAATGTGATAAGACTTTCGAAATACGTCAAATTTTAACAAGACATAAAAATGTTTACCACTCTAAGCTAGATTGA
- Protein Sequence
- MASTTSCRLCSFTSEEFKCLFDDNGLKSEVYQIAVKYFNPSLLNSGTETTLRVICLECWQHISDFHSFHQWILNAQAQQEDMELIVHEEKSDEQISTLEFDLIDDTRTSKSSNSTKSISSPINSIESKVENYDISITKLRRKLECYKCKDIFQSFANLDAHFQQFHPIDQFYVICCKEKFYQRWNLFQHLLGFHKQKDGNAFKCETCGASFSQYGNLRRHVRRKHTVQPLLKWICKYCNQMFKNRSHLERHKHKIHTSQLNIDLQYDLMQNENKNDEEEYLDSFEIDYEPEEDIQVDANEISNLNKKESILNEFRLESSEANKDLQSLEQASYNLEKGYDDFIAKWKGDLECPKCNKHLISYPQLSEHFVLEHPEERCYINCCHLTLYERTSIVEHLRFHENPNAFECSDCGKCFKNSKGLGSHKLQVHSDKRSTYHLHLCYCKRAKELHAENKAKGQQIEYNTVVCCQRKKKILEDDALIAEWKKDLTCEICKATFSYYSLMRAHFYHKHPGEKCYILCCNRKISRISDALEHIRSHLDPHAYRCKLCDITFSGKSTLAKHMRNAHMDSLPKHKWACDKCDKTFEIRQILTRHKNVYHSKLD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00260165;
- 90% Identity
- iTF_00045638;
- 80% Identity
- iTF_00045638;