Agra001066.1
Basic Information
- Insect
- Aldrichina grahami
- Gene Symbol
- bab1
- Assembly
- None
- Location
- Contig206:141783-378082[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-18 3.6e-14 51.7 0.0 1 43 649 692 649 694 0.95 2 2 3 1.3e+04 -5.2 2.7 6 14 789 800 785 810 0.65
Sequence Information
- Coding Sequence
- ATGGATACAAATAGCCCTCCGCCACGTGCTGTCAGCAGTCAAGGGCAAGCAGGTACAGCAGGAGTTAGGGATGTAGATTCGCCGTTTCGCGATTCTCAAGAGACGAAGCAAAGCTCATCAAGACCTCCCTCTAGACCCTCTTCAGTTCTGCCCCATATATTGGCTTCTTTTGCTAATAGTCCTACAGCATCGAGCAGTAAAAAGGCCAGTCCTGACAGAAGAGAAGAATCCTTAGGGTGTAAAGCCAGTCCAACCTTAAAATCACCCTTAGCAAACTCTGATAGATGTCCCTCAACACCCATCTGTGGTGTGCCACCTTTCTCACCACAATCGGATCGTTCCTCTTGCGGCTCGACATCCGCAACTGCGCCCCAACAGTTTTGTCTACGTTGGAACAACTACCAAAGTAACCTTACCAGTGTCTTTGATCAGCTGCTGCAGAATGAATCTTTTGTGGATGTCACTTTGGCCTGTGATGGACGTTCCATTAAAGCTCATAAAATGGTGCTATCGGCCTGCTCTCCCTACTTCCAGACGCTCTTCTCCACCACACCCTGTCAACATCCCATAGTCATAATGCGTGACGTCAACTGGTTCGAGCTTAAGTCCATAGTCGATTTTATGTACAAGGGAGAGATAAATGTAAGTCAAGAGCAAATCGGGCCTTTGCTAAGAATAGCCGAAATGCTAAAAGTCAGAGGCTTAGCCGATGTCAGCAATATCGCTGGTACCACCCATCTCAGTGCACAGCAAGATCAGTCTAACGAAAAGGATTTATACTCCTCGCAAACAATTATGGAGTCACCGAAAAGACATGATTTAAACACATCCCCCTCAACGAAAAGACCGCCGAGCCAATCACACGATTCCGATAACGAACGATCCGAACACGACAGAGACATTTGCTCGTTGGCAGAAACGGAGAGAAAAAGTCGTTTGGAGCAATCTGATTGGGACATAACGGGTTCAGTGAAAACCTCTGAGAGTAGTAATTTAGAATTGCGCCTATCGCCCTTGCAACACCAACAACATTTAGTGGCAAGAAATGTTCGAAAACGTAGATGGCCGTCCGCTGATGCAATATTTAATCCGCCCGAAAGTCCACTAAGTAGTCTAATTGCCGCCGAGAGAGCCGAACAGGAAAGAGAACGAGAAAGAACGCGAGAACGTGAAAAATCGCGAGAAGTAACACTTTTTACACCACCCATTCCTGTTACATCTTGTTCTTCCGGCGCCACCTCAAGTCTCAATAGTGGCATGAGCACAAGCGTACTGGAGTCCAGAGTACTTATGGATATAACATCGCCATCACCAACGCCCACCCCAAATCTACTACCACCTGCACGGACACCATCGGGAATGTTGACGCCATCACCTCATCTACAGATCTCACATCATCATTCTCATCAGCCACTCCAGTCTCATCGCTCATCACCTGCCTCGTCCGTTACTTCAACGCACCCGTCCAGCATTTTAAGTAGACCTTTAACACCTTCCCCAGCCAATGTGGGTCATGGTGGGGCCGGCAGCAGCCGACTAGAAGGCAGTCAAATGACAGGCGACTCCCATCGATTTCCTCTAGGCCCAGCTCAAGCAGCAGCTATGGCGGCGGCAGCCTCACAAATGGATTTAGGTAACACAAGTACTATGGGTATGAGACCACATTCCTCCTCAGGTCCTGCTATGGTCGCAGTGCCGGGTCATCATACATCGTCGCTGGTGGAAGATCTAGAAATAAAACCAGGAATAGCGGAAATGATACGAGAAGAAGAAAGGGCAAAAATGTTGGAAAATTCGCATGCCTGGATGGGAGCATCTAGTTCATCAATAGCAGCAGACAGTTATCAGTATCAGCTGCAGTCCATGTGGCAGAAATGTTGGAACACAAATCAAAGTTTAATGCATCATTTGCGATTTCGAGAACGTGGTCCTTTGAAGTCATGGCGTCCCGAGACAATGGCGGAAGCTATTTTTAGTGTGCTGAAAGAGGGTTTGTCACTTTCGCAGGCAGCACGAAAGTATGATATTCCTTATCCTACATTTGTTCTATATGCCAACCGGGTGCATAATATGCTGGGGCCATCTATTGATGGCGGCCCCGATTTGAGGCCGAAAGGCAGAGGTCGGCCGCAACGTATTCTGCTGGGTATCTGGCCAGATGAACATATCAAGGGTGTCATAAAAACTGTTGTCTTCCGCGACGCCAAAGATCTGAAGGATGAAGGTCTGGGTCACATGCCCTATGGACGCCATTCGCCTGTTTTTCCATTTCAGGAGGGACCATTAAGTTACTCTGGAGTTTCCGGACAATGTCCAAATGGAATGCCTGGTGCCACCGGCGACCAGATGTCGCAAGAAGCCACAGCTGCAGCAGTGGCGGCGGTTGCTCATAATATACGTCAGCAAATGCAAATGGCGGCAGCAGCTCAACAACAACAACAGCAGCTTGGCGAGGGCCATGGTGGGCCGAATCTGTTTAATCTTCCGCCTCATATGGCTAGCGGTGGTCCCATGGTGGGACCGCCTGGCTCAGGAGGAGTGCCTCTACCTAAAGCAAGTATTTCTCCGGCTCTAAGCTCTTCATCGAATACTGCTGGCATTAGCTCAATGATGGGGCCACGACATGTTCCTTCACCTTGTGGACCCAATTTGCCGGGTATGCCCCAACTGCCGCCTGGCATGGCAGTAGCTTTGCATATGGCAGGCAGTGGTCCTAGTGGTCGTTGTGATCCCAGTAGTGTTTTAAGTCAACAGCAACAACATCAACTCCAACATTTGCATTTACAACAGCAACATGCTCTTCACCAACAACAGCAGCAGCAGCAACAACAACAACAGAAGCATCAACAGCAACACCAAATGTCATTTGGGCCACACACCTCATCACTGAGCCATTCATCGATTGGCGGCACACCCTCACACACGATCGTTCATCAATCACTGCAAAAAACAACGACGGCTTCCTCAACAAAAGCACACTCTTCCACATCATCGCCGTCCAGACGCAACAGTCCCCACAGTCTTACGCCATTACATTCCCCCCTAACGGAACTTGGTCTAGAAATGAGTTTCAAACCATCCCGCCCATTTTCTCCCTCCCGTCTATTTTCCGATGATATTTCCGATATTGTTGGTGTTGCTGCCTCACCTCTGCGATCGCCCTCAACGTCCACACATCCATCATCATCAGTAGCAGTGACGACAGCAACAATAACCACCACTAGCAGTATTAATACAGCCACCGTCAGAGCATCTTCCTTAGAGCCATCAGCATCGGCTACATCACAAATGCAACAAGCAGCAGCTGGAGCTATTGATAGTACAGCAACCGCATCAAGCAACATAAGTTCCACGGGGATTAAACTCGAACCTATTACGACAACTAATGATTAA
- Protein Sequence
- MDTNSPPPRAVSSQGQAGTAGVRDVDSPFRDSQETKQSSSRPPSRPSSVLPHILASFANSPTASSSKKASPDRREESLGCKASPTLKSPLANSDRCPSTPICGVPPFSPQSDRSSCGSTSATAPQQFCLRWNNYQSNLTSVFDQLLQNESFVDVTLACDGRSIKAHKMVLSACSPYFQTLFSTTPCQHPIVIMRDVNWFELKSIVDFMYKGEINVSQEQIGPLLRIAEMLKVRGLADVSNIAGTTHLSAQQDQSNEKDLYSSQTIMESPKRHDLNTSPSTKRPPSQSHDSDNERSEHDRDICSLAETERKSRLEQSDWDITGSVKTSESSNLELRLSPLQHQQHLVARNVRKRRWPSADAIFNPPESPLSSLIAAERAEQERERERTREREKSREVTLFTPPIPVTSCSSGATSSLNSGMSTSVLESRVLMDITSPSPTPTPNLLPPARTPSGMLTPSPHLQISHHHSHQPLQSHRSSPASSVTSTHPSSILSRPLTPSPANVGHGGAGSSRLEGSQMTGDSHRFPLGPAQAAAMAAAASQMDLGNTSTMGMRPHSSSGPAMVAVPGHHTSSLVEDLEIKPGIAEMIREEERAKMLENSHAWMGASSSSIAADSYQYQLQSMWQKCWNTNQSLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKDLKDEGLGHMPYGRHSPVFPFQEGPLSYSGVSGQCPNGMPGATGDQMSQEATAAAVAAVAHNIRQQMQMAAAAQQQQQQLGEGHGGPNLFNLPPHMASGGPMVGPPGSGGVPLPKASISPALSSSSNTAGISSMMGPRHVPSPCGPNLPGMPQLPPGMAVALHMAGSGPSGRCDPSSVLSQQQQHQLQHLHLQQQHALHQQQQQQQQQQQKHQQQHQMSFGPHTSSLSHSSIGGTPSHTIVHQSLQKTTTASSTKAHSSTSSPSRRNSPHSLTPLHSPLTELGLEMSFKPSRPFSPSRLFSDDISDIVGVAASPLRSPSTSTHPSSSVAVTTATITTTSSINTATVRASSLEPSASATSQMQQAAAGAIDSTATASSNISSTGIKLEPITTTND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00045430;
- 90% Identity
- iTF_00045430;
- 80% Identity
- iTF_00045430;