Agra006799.1
Basic Information
- Insect
- Aldrichina grahami
- Gene Symbol
- kn
- Assembly
- None
- Location
- Contig10:612744-661505[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-235 3.5e-231 768.1 0.0 10 385 19 410 10 413 0.98 2 2 4.1e-10 5.1e-06 24.6 14.2 422 519 413 515 410 530 0.74
Sequence Information
- Coding Sequence
- ATGTTTGGCCTGCCACCCACGGCGGCGGACATGAATCAACCGCGTGGACCCATGACCTCATTGAAAGAAGAGCCGCTGGGTGCTCGAGCCTGGATGCAACCTGTCGTCGATCAAACCAACTTGGGCATTGGCAGAGCACATTTTGAGAAACAACCACCCAGCAATTTGCGAAAATCAAATTTTTTCCATTTTGTTATTGCTCTGTACGATCGTGCCGGCCAACCCATTGAAATCGAAAGGACTGCATTTATAGGATTTATTGAAAAGGAATCTGAAGCGGATAGTACGAAAACCAATAATGGCATACAATATCGTTTACAGTTACTCTATGCAAATGGTGCCCGACAGGAACAGGATATTTTCGTTAGACTTATAGACTCCGTCACCAAACAAGCAATTATCTATGAAGGACAAGATAAAAATCCAGAAATGTGCCGTGTATTATTAACACATGAAGTTATGTGCAGCCGTTGTTGCGACAAGAAAAGTTGTGGAAACCGCAATGAAACACCATCAGATCCTGTCATTATTGATCGATTTTTCCTAAAATTCTTTTTGAAGTGCAATCAAAACTGTTTAAAAAATGCTGGAAATCCTCGGGATATGCGTAGATTCCAGGTTGTCATAGCCACCCAAGTGAGTGTGGAGGGCCCTTTGTTGGCGATCTCGGATAATATGTTTGTGCACAACAACTCCAAGCACGGACGCAGAGCCAAACGTTTGGATACAACGGAAGGTACAGGCAATAACACTCTGTCCATAACGGGACATCCCTTAGCGCCTGACAGTACCTATGATGGCTTATATCCACCGCTGCCTGTAGCTACGCCTTGTATTAAGGCCATATCACCGAGCGAAGGCTGGACTACTGGTGGTGCCACCGTTATCATTGTGGGTGATAATTTCTTTGATGGCCTACAGGTGGTGTTTGGCACAATGCTGGTATGGAGTGAGCTGATAACATCGCACGCCATACGTGTACAAACACCGCCCAGACATATACCGGGTGTAGTCGAAGTAACCTTGTCCTACAAAAGTAAACAGTTTTGTAAAGGATCTCCCGGTCGTTTTGTTTATGTTTCCCTTAATGAGCCCACCATTGATTATGGTTTCCAAAGGCTGCAGAAGTTAATACCACGTCATCCTGGCGATCCGGAAAAATTGCAAAAGGAAATTATTTTGAAAAGAGCAGCCGATTTGGTGGAAGCTTTATATTCCATGCCTAGATCACCCGGCGGTTCGACCGGCTTCAATTCGTATGCTGGACAACTGGCAGTGAGTGTACAAGATGGTAGTGGCCAATGGACCGAAGACGACTATCAGAGAACACAGTCGAGCAGTGTTAGTCCACGAGGCGGTTATTGCAGCAGTGCTTCAACACCTCATAGTTCGGGAGGCGGTTCATACGGTGCTACGACTACGGCCGCTACAAATGGTTATGGTCCTACGCCAAATATGGGCACTTTGTCATCTTCACCCGGCAGTGTTTTCAATTCCACATCAACTTGTGCATTTTCGCCATTAATTCCAACAGTGTCCTCAACCTGGCATCAGGCTCTGGTACAACATCATCACTCGCATCCACACCACTACCATCATCCGCATCAGCCTTGGCACAATCCAGCCGTTTCAGCAGCCACAGCGGCCGTTTAA
- Protein Sequence
- MFGLPPTAADMNQPRGPMTSLKEEPLGARAWMQPVVDQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKESEADSTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQVSVEGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNNTLSITGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDDYQRTQSSSVSPRGGYCSSASTPHSSGGGSYGATTTAATNGYGPTPNMGTLSSSPGSVFNSTSTCAFSPLIPTVSSTWHQALVQHHHSHPHHYHHPHQPWHNPAVSAATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00517500;
- 80% Identity
- -