Arep019612.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Alcis repandata
Gene Symbol
nfxl1
Assembly
GCA_949125135.1
Location
OX421243.1:817303-819756[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 2 2.9e+04 -7.8 5.6 15 19 135 139 134 139 0.81
2 18 0.01 1.5e+02 3.2 0.3 4 10 170 176 169 177 0.97
3 18 3.1e-07 0.0044 17.7 15.9 3 19 187 203 186 203 0.95
4 18 2.6e-08 0.00038 21.1 12.8 3 18 240 255 238 256 0.92
5 18 2 2.9e+04 -4.4 1.7 6 10 281 285 280 285 0.83
6 18 3.6e-10 5.2e-06 27.0 11.2 1 18 291 308 291 309 0.97
7 18 1e-05 0.15 12.8 19.0 4 19 347 362 345 362 0.93
8 18 2 2.9e+04 -5.3 2.2 5 10 385 390 385 390 0.88
9 18 3.7e-05 0.53 11.0 19.8 1 18 396 413 396 414 0.97
10 18 8e-09 0.00011 22.7 16.9 1 19 423 441 423 441 0.99
11 18 0.0002 2.9 8.7 6.4 9 19 489 499 487 499 0.89
12 18 0.014 2e+02 2.8 6.3 3 12 510 519 509 519 0.91
13 18 0.4 5.8e+03 -1.9 3.4 14 18 548 552 548 553 0.85
14 18 0.031 4.5e+02 1.7 1.8 7 16 568 580 568 584 0.76
15 18 0.00039 5.6 7.7 5.2 1 11 589 599 589 600 0.90
16 18 0.88 1.3e+04 -3.0 1.6 15 18 614 617 613 618 0.82
17 18 0.00032 4.6 8.0 11.1 1 18 625 642 625 643 0.91
18 18 0.0018 26 5.6 12.2 1 16 684 698 684 711 0.85

Sequence Information

Coding Sequence
ATGGCGCGACGGTATAGCGACGCTGCAGCTAAACTGCAGCAAAATGTCCAGAAACATTTAAAGGAAATGAAGGAACAGCTTTCTTCTTCGGAAGATGAAGATCCCTACGAGGCTAGCGTCTTGGAAGGTGTGTTTCAAAGCTACTGGAAAGGCGGAGGCGATAATCGCATGCTGAACAGAACAAAGAATCTTCTAGAAGAAGTGCTTAGCGGCCGTTCTGTGACCTGCCTAATTTGCATCGCTTCTATCAAACGCAACCACGCTATCTGGACTTGTGACCACTGTTACTCGTACTTCCATCTCTCCTGCATTCAAAAATGGGCAAACGAGAGCATAAGTCTACGTAGCGAAGAAAATCAGGGCGCAGTATCGGTGTTTGTGCCGAAGAAAGTTGAATGGTGCTGCCCAAAATGCCGACAAGCTTATGGCAAGGAGCAGATACCTCGGAAATACAGGTGCTTTTGTGGTAAAAATGACGATCCTCCACAGCATCCATGGCAAATTCCCCACACTTGTGGAGAAGTTTGTGGAAAGAGACTGTCTACAGGAGATAACTGTAAGCACAAGTGCCTTCTCCTCTGTCATCCTGGCCCGTGCCCACCATGCCCTCAAACAGTCAACGGCATATGCTACTGCCAAAAAGAAAAGAACAAAGTCAGGTGCAGCTCTGCTAAGTGGTCTTGTGGACAACAATGCAAAAAAACTCTTCTCTGTGAAGCTCATAAGTGTGAAAGTATATGCCATGATGGTGATTGCCCTCCTTGTGGTTATACAAGCATACAACCCTGTCAATGCAGTCATGAGAAGTCCAAAAGACCATGTAATGATCCATTTTGGCAGTGCACTAAACCATGCAAGAAACCATTTGACTGTGGCTATCACAAATGTGAGAAAGTCTGTCATTCAGGTAGTTGTGGAAGCTGTCTAAACTCTGGATTGCGCTCCTGTCCCTGCGGAGCTAACCAGCGCATTGTTCAATGCCCTGATGTCATGGAAACATGTCTGGGAACCTGCAGTAAAAAGCATGAAAATTGTGACCATCCATGTCCAGAAAAATGCCATAAAGGGCCATGCCCACCTTGTCAGGTCCTCGTTCAGAAGCGATGTCTTTGCTCTACTCATACCAGATCTTTGCCATGCAGTAAAGATTTTAAATGTGAGACAAAATGTAGAGGAACTAGACTGTGTGGAAAGCATGGCTGTGGCCGAAAATGTTGCAATGGCGACTGTCCTCCATGCGAGAAAACTTGCGACAAACCTCTCCAGTGTGGCCGCCACAAATGCACCAATATCTGTCACCATGGGCCATGCTACCCGTGTCCACTGGAGTCTAAAGTAGCCTGCAAATGTAAAGGAACCTATCTCACAGTCCCATGCGGAAGGGAGAGATTTGTTAAGCCACCAAAATGTGCTCTGCCTTGTAAAGTCAAATACAAATGTGGTCATTTAGAAGAAAATAAGCATTCATGCCATTTCGGAGACTGCCCCCCATGCAAAGCTATCTGCAAAAAGATCCATCCTAGATGTCGACACGAGTGTGCATCTATTTGTCATGAGTATGTTGCCGTTGTATTCAAGCAGGTGGAGAAACCGGCAACTCCATGGGAAGTCCAACCTCCAAAGACTAAAATGATGACTTTAGAGTGTCCTCCATGCGATATTTCTGTGCCTATCGTATGTTTTGGGGAACATGAGACAACAGAACAACCGTGTCATACAGCCAGACGAGGACCTTGTGATCGAATATGTAACAAAATACTGGCTTGCAGAAATCATACTTGTCAGTTACTCTGTCATCTTGACGCTTATGATCCTCATTATCCAAATGGGCCTTTTTCATGTGAGCCTTGTGAGCGTGAATGTATACTAGATTGCGGACATAGATGCCAAGAAGTAGTCTGCCATCCATGGCAATGCCCAGACTGTAATGATTTTGTACCAGCACTTTGCTACTGTGGTGGTCAGAACTTAATACTATCGTGTGCTGATATGCAATCGCCCGATCCGGAAATGTTTACTTGCAGGAAGCAATGTCCAAATAATTTAGAATGCGGACATCGGTGCAGAAGACCATGCCATATGCCACCTTGTGGTGACCAAATTTGTGTGAAGAAGATCAAAATTCCTTGCCCATGTGGCAACTTGAAAGAAGAAGTTCCATGCAATGAAAAAGGAGAGATTAAAGTTTTGTGTGATGAAACATGTGAAGCTAAAAGAGTAGCTGCACAACTCGAGCATGAGAAAGAGCAACAGAGACTCCAGAAAATAGAGGAAGAAAAGAATCAAAAAGAGCTGGCTGAATATGAGTGGAAACTCGGCGGAAAAAAGAAGAAACATAAGAAAAAGAAGGTTGTCATCAACAAGGATCAGAGAAACTGGTTGCAGAAGTATTGGATTCTCATTCCCTCTGTGTTGATTGTAATTTTAGCTGCTtcgtattacatattttattag
Protein Sequence
MARRYSDAAAKLQQNVQKHLKEMKEQLSSSEDEDPYEASVLEGVFQSYWKGGGDNRMLNRTKNLLEEVLSGRSVTCLICIASIKRNHAIWTCDHCYSYFHLSCIQKWANESISLRSEENQGAVSVFVPKKVEWCCPKCRQAYGKEQIPRKYRCFCGKNDDPPQHPWQIPHTCGEVCGKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGICYCQKEKNKVRCSSAKWSCGQQCKKTLLCEAHKCESICHDGDCPPCGYTSIQPCQCSHEKSKRPCNDPFWQCTKPCKKPFDCGYHKCEKVCHSGSCGSCLNSGLRSCPCGANQRIVQCPDVMETCLGTCSKKHENCDHPCPEKCHKGPCPPCQVLVQKRCLCSTHTRSLPCSKDFKCETKCRGTRLCGKHGCGRKCCNGDCPPCEKTCDKPLQCGRHKCTNICHHGPCYPCPLESKVACKCKGTYLTVPCGRERFVKPPKCALPCKVKYKCGHLEENKHSCHFGDCPPCKAICKKIHPRCRHECASICHEYVAVVFKQVEKPATPWEVQPPKTKMMTLECPPCDISVPIVCFGEHETTEQPCHTARRGPCDRICNKILACRNHTCQLLCHLDAYDPHYPNGPFSCEPCERECILDCGHRCQEVVCHPWQCPDCNDFVPALCYCGGQNLILSCADMQSPDPEMFTCRKQCPNNLECGHRCRRPCHMPPCGDQICVKKIKIPCPCGNLKEEVPCNEKGEIKVLCDETCEAKRVAAQLEHEKEQQRLQKIEEEKNQKELAEYEWKLGGKKKKHKKKKVVINKDQRNWLQKYWILIPSVLIVILAASYYIFY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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