Arep002420.1
Basic Information
- Insect
- Alcis repandata
- Gene Symbol
- pnr
- Assembly
- GCA_949125135.1
- Location
- OX421222.1:15017285-15029310[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5e-18 2.1e-14 53.4 3.8 1 35 111 144 111 145 0.97 2 2 4.5e-18 1.3e-14 54.2 6.0 1 34 165 197 165 199 0.98
Sequence Information
- Coding Sequence
- AtgttcggcggcggcggcggcggcggcggcgggtacGGCGGCGGCGAGTGCGGCGACGGGTACGGGCTGGGCTACGTGGCGGGCGGCGGCCGCCTGCAGCAGTACGCCGCGCACTTCGCGCCGCACCAGAACGTGTGGCACCACCACCACGCCGCGCACCACGACTCGTACGGTGGTGCCGGCGTGGGCGGTGTAGGCGGCGTGGGCGGCGTGCCGGGCGGCCTCTACTCGCAGAACATGGTGATGGGCTCATGGTGCGCGCCCTACGACCCGCTGCAGCGCCCGCCCGCTTACGATGGCGCCCTGGAGGCATTCGAGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCAACAACACGCCGCTGTGGCGGCGCGACGCCACGGGCCACTACCTGTGCAACGCGTGCGGCCTGTACCACAAGATCAACGGCGTGAACCGGCCGCTCGTGAAGCCGAGCAAACGGCTGTCAGCGGCGCGGCGGCACGGCCAGTGCTGCACCAACTGCGGCTCGCGCAACACGACGCTGTGGCGCCGCAACAACGACGGCGAGCCCGTCTGCAACGCGTGCGGCCTCTACTACAAGCTGCACGGCATCAACCGGCCGCTCGCGATGCGTAAGGACGGCATCCAGACACGCAAGCGCAAGCCCAAGAAGGCTGGCAACGGCACAAAGCCCCCACAGGACTCGATCAAGAAGGACGGACACAGCTCCCCCGGAATCGACGATAGTAAATCCAGCATGTCTGGCACGGAGCTGCCGCTCCCGCTGACGCCGACGccgcacgcgcacgcgcacggcggcggcggcgcggcgcggcgcgacccGGCGGCGCAGtacggcgcgggcgcggtgtTGCAGACTCCCTCGTTCCTGCACAGCCCGTCCCTCTTCAACATCAAGAGCGAGCCGGCGCCGGCCGCCCCGTACGAGGCCTACCACCACGGGGACCACGCGCCGCACGCCTCCTCCAACCACTACCACTCGCAGCAGCACTACCTGCACGCGCTGCAGTACGGGCTGGGCGGCGGTGAAGAAGAAGAAGGCAGCGGCTTCCTCCACCAGCGCAACGTGACCGCGCACGCCAAGCTCATGGCGTCCACGtag
- Protein Sequence
- MFGGGGGGGGGYGGGECGDGYGLGYVAGGGRLQQYAAHFAPHQNVWHHHHAAHHDSYGGAGVGGVGGVGGVPGGLYSQNMVMGSWCAPYDPLQRPPAYDGALEAFEEGRECVNCGANNTPLWRRDATGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKAGNGTKPPQDSIKKDGHSSPGIDDSKSSMSGTELPLPLTPTPHAHAHGGGGAARRDPAAQYGAGAVLQTPSFLHSPSLFNIKSEPAPAAPYEAYHHGDHAPHASSNHYHSQQHYLHALQYGLGGGEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00826483; iTF_00827651; iTF_00034375; iTF_00033481; iTF_00143555; iTF_00667033; iTF_00818815; iTF_00056203; iTF_00125580; iTF_00390962; iTF_01172925; iTF_00791744; iTF_00790856; iTF_00206656; iTF_00207504;
- 90% Identity
- iTF_00033481;
- 80% Identity
- -