Basic Information

Insect: Alcis repandata
Gene Symbol: -
Assembly: GCA_949125135.1
Location: OX421224.1:10171007-10175842[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.15 12 7.2 3.4 2 22 185 205 184 205 0.95

2 15 4.3 3.4e+02 2.7 0.4 1 20 303 322 303 325 0.70

3 15 0.47 37 5.7 0.4 2 23 460 481 459 481 0.96

4 15 0.073 5.8 8.2 0.9 3 23 561 581 560 581 0.98

5 15 0.027 2.1 9.6 0.5 1 23 589 611 589 611 0.97

6 15 0.11 9.1 7.6 3.3 1 23 648 670 648 670 0.95

7 15 0.00021 0.017 16.2 4.0 1 23 678 700 678 700 0.99

8 15 0.83 66 4.9 1.0 1 23 863 885 863 885 0.95

9 15 0.89 70 4.8 0.2 1 23 891 913 891 913 0.95

10 15 0.007 0.56 11.4 1.6 1 23 979 1001 979 1001 0.95

11 15 0.012 0.99 10.6 0.9 1 23 1007 1029 1007 1029 0.95

12 15 0.0059 0.47 11.7 2.6 1 23 1120 1142 1120 1142 0.97

13 15 0.00015 0.012 16.7 1.4 1 23 1148 1170 1148 1170 0.99

14 15 0.28 22 6.4 2.0 1 23 1262 1284 1262 1284 0.96

15 15 0.0026 0.2 12.8 3.7 1 23 1295 1317 1295 1317 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.15	12	7.2	3.4	2	22	185	205	184	205	0.95
2	15	4.3	3.4e+02	2.7	0.4	1	20	303	322	303	325	0.70
3	15	0.47	37	5.7	0.4	2	23	460	481	459	481	0.96
4	15	0.073	5.8	8.2	0.9	3	23	561	581	560	581	0.98
5	15	0.027	2.1	9.6	0.5	1	23	589	611	589	611	0.97
6	15	0.11	9.1	7.6	3.3	1	23	648	670	648	670	0.95
7	15	0.00021	0.017	16.2	4.0	1	23	678	700	678	700	0.99
8	15	0.83	66	4.9	1.0	1	23	863	885	863	885	0.95
9	15	0.89	70	4.8	0.2	1	23	891	913	891	913	0.95
10	15	0.007	0.56	11.4	1.6	1	23	979	1001	979	1001	0.95
11	15	0.012	0.99	10.6	0.9	1	23	1007	1029	1007	1029	0.95
12	15	0.0059	0.47	11.7	2.6	1	23	1120	1142	1120	1142	0.97
13	15	0.00015	0.012	16.7	1.4	1	23	1148	1170	1148	1170	0.99
14	15	0.28	22	6.4	2.0	1	23	1262	1284	1262	1284	0.96
15	15	0.0026	0.2	12.8	3.7	1	23	1295	1317	1295	1317	0.98

Sequence Information

Coding Sequence: ATGGGCTTACAAGACGCAGAGAGAGACATAGTGAGCTGCAATAGTGATTCGAACGATGCAAGCTCGTCGCACACAGACGCGCCCCGCGACGGAACGCAGGATGCCCCCGGCCAGCACTCGCCCGGCTCCGCGACCGACGACCCGAAGTCACAAAAACAGAGCAGGAAGGCCCCCCGGCCGATACCGCAACTCATCCCACTGAACGCGTCTACTCCTAACCAAAAAATATCCGGCGAGCCGCCGGCTAAAAAATTCAAAGAATCCATGAGCTCCGAATTAATCGGAAAGTTTGAGAACTTGCCGGAAGATATCACTTTGATACCCGTCAATGTGCCTAATAAAGAAACCGCAGTGCGCAAGAAAAACAATTCTTTTTTcgataaattaaaagaaaggcTCTTGACTGAAACGGGCGAAGAAGGATCACTGAAATGTAAAAGTTGCGGCTTCGAAAGTAAATGTCTGTCGGAGCATTCCGTGCACGAGAAAAATTGCTCCAGTCAAGCCAATCGTATTACGATGAGCCCGGCGCTTCCAACTAAGGGTTCCACTCGCTGTCAAAACTGTAGACATAGATGTAAATCTAGCGCAGACTTATACGTACATATGCAGACTTGTGGAAAGAAAAACAATGTTTCTGGTGAAAGTGCAACAGGAAGCAAATATAACAACGAAGCCTCGACATCGCAACTTGAAAAAGAAGCAGAGCCACACCCAATGGAAAACGTTGTTTTCGTCTGGAATAATATAAATCAGGAGAGCAGCAAATTCGACAGACCTTTAGATATCAACATTAACGACGATTCAACAATTACTGACCTTAGTAGACATTACGACACTGAAGCTGCAGACGAGAATGAGGGCATGAACTTGTCACCTAATACTTTAAGCCTTGGCAAGAACGTTTACAAATGCCCAGATTGTAAATTTTGGGCAGCTACCGCATCCAGATTTCATGTGCATATAGTCGGTCACTTGAACAAAAAGCCATTCGAGTGTTCGCTCTGCAAATACAAGTCCAATTGGCGATGGGATATCACTAAACACATAAAGTTGAAATCAGCCAGGGACCCGGAACACAATGAAGCCAAAGTACTGATGACAGATGAAACTGGCAGAAGAAACTACAGCAAGTACAACAAGTTCTTAGCTGTGCcagttttaaatgaaaatggtgaaaaCGAGTTCCACTACGTAGATCCAAATACGACTGTGGATGCGTCCATGGAAGTAGATGAATCATATGGCAACGACTCGGCTGACATGATGCACGCGGCGTATGAGATGCAACCGCTCAACTTGCAGACTCAGACCACTGATAAATATAACATGGATAATAGGAATGTAGATAATAAAAAACCTAAGAAGACATTATGGAAATGTAAAAAGTGCAACTACAAggACCCATCGAAAGAAGCATTATTAGAGCACGTGAGACAACACGCAAGAGAGGGGGCAGACGATACTCTTCAAAGTAACAACAAGAAGTTGGAGAATGCTCCCGATCCCGCAGACTTGGCGTACCGTTGTGGACACTGCAATCAGCTTTCTAACTGGAAACACGTCATACAGAGGCACTGTCGTTTGAAGCACGACGGAATCATCAAAGTTATCACTACAGTGAAACCAAAACCGGATCAGTCTCAAATACCAGGCCACGAATGCGTTTACAGCGATCTTTGCACCAAGTGCCCATTCAAGGCCAACGACAAAAAACAACTCTTCGCACATTTGCAACAGCACCAGCCATCGCCGGAATCAATCTTCAAATGCTATTTCTGCCCTTATTTTGTCAAAGATGAGCAAGACTTGATACAGCATCTCTTGTTACATGGAATAACCGACCCAGAGGATTATATCGCTAAAGCTATGGGCTGTAGGTCTCCGTTACCGGACCGCGTTCTTACCGATGCACCAGTACCACCTAATATAACGAAACGGCACAAATGTTCTGAATGTCCATACGAAACAAATAGCAAATCTCAATACATGTATCACGAACAATTTCACCGACTTCCTCCAGACACCCCCTACAAGTGCCCAGAGTGCAATTATAGTGTATCAAAGAGACATTTGCTTCATCAGCATCTGAGAGTACACGGAATTCATCCATCGTCAGACCGAAAGAAAAATGAAACTGAAGCAGAATTAGAAGCGAGTACGGCTTGGCAAAACAAACTAGACGCTAAATCAGACTTTGCAGATGATTTACCTTTTGTGTGGGTTTCTGCAAGGGATGAATTCCACAAAATGTATAAGTGTCGCTATTGCTCTTATGTCAACTCTCAGAAATGTAAGTTACCAAACCATGAAAAGATTCATTGTCTGGAATTTGAAAATAGCGACGTTATTATTTACAAATGTTTAGAATGTAAATTCACATGTGATGATCCTGAAAAAAGTGCAGAACATTCCAAAAAGCATGGTCTGTTGTACGGACGCATCTACAGCTATGTAGAAGATGGAATTCCAGATGAGGACCAAATAGCAAAATTGCGTAGGGTCATCGAACAAGAAAAGGCTGTCGAAGAATCTACAAAAGAAGAAAATGCTACTAGTTCCGAAtcaactgaaaataaaataatgttttactgTCGGAAATGTCCAGCTAATTATTTCAATGAAAGTGAAATAAAAGTCCACGAGAAGTTCCATGACCGTATTTTGGAATTCAAATGTAAACTTTGTGAATTCTCAGTGTCAGAAGAGACAGAAATAACGACCCATGAAATTGTGCACTCGGACGATTACCATATCAGAACACATATGCACAAATTTGTTCACAACTACCACTCACTTTACAAGCCACCTAAACTTGAGTCTATCCGTTGTCCCGAAACTTCAAAAACATCGTGGGTTGTGGTAGTAAACAAACCTGTTGAATATGCGGAGCCTGTTCATAAGAAATCAGAGTCAAAACATACACCAAAACAATACCATTGCAAAGAATGCCCAGCCAAGTTTTTCAAAAGTTCCGCGCTCTCCTACCACATGGGATTACATGGCGGAGAAGGCGAACATAAATGCAAAAAATGCAGTTATGCCGTCAAAAACGTTGGTAACTTAGCCAAGCATGAAATATTACACGAAATCGAAAACAAACCACCCGATCGATGCGATTATGACTCCGGTGAAGATATGGATTACAAAAATGTTCCCCTTTCTGGGACTGATTTATTCCAAAGAAAGACTGAAGCTATTAAAAGAGTATTGACTGACAAAGATAAACTGGTCAGACCAAACGACCACTTTCCACCCGTGCTACTAGCTGATCCACAGTTCGGTTACCTCATGCATGGTAATCCCGAATTCATTTATCCTACATATTTGAAAAATGGACGTCAAAAAGAAAAGAGATATAAATGCCACAAATGCCCATCTGCTTTCGAGAAGAGAGAACAATATAAGATACATCTATCTCTCCACGGCTCGAAACAAAGATACAAGTGCGAACTGTGCGACTATTCTGTAAAATATTACGCTAATTATGTGCAACACATGAGGAAACACCAAATGAACGATGAAGCTCAAGCCGAAAGGAAGAAGGGTAGCAGTGGTTTCACCGAACCTGACAACcaagatgatgataaaaaggaCGATAGCGGGGATAACATTAAATTAGCTATTAAAACAATGCCCAAAGGCGCGCCCAAGACAGATTTTCAGCAGTTTTCAATTAGAGACCAGCAAACTTTGAGACTATTGCAGCGGCGTAGGTCTATGAATGCCGGCGGCAAAGAAGCAGACTCCAACGAAACCTCGCCGGCTAAAGAGCGCAAGTTGCATATGTGTCTACTGTGTCCGTACACCAACCAACGGCAAGACGCGCTGAACAATCACTACCGGAGACACGATGCCGCCGATATTCTCAATATCGGAAACCATAAATGCTCTTACTGCGACCTTGTCGTCGTTCAATCACATTTCCTACGTGATCATTTAAAAACTCATTTCAGTTATCATAAAACTCTGACTCCTGAATGTTTCGTAGCTAATGAAAACGTGACTTTCACTATCAGCAAAGTTGACGAAGAAAGCGAACCTCTTGATCTCAAGTTAGACGTGAAAAGCAAAATTATATTCAACgaagaaaaaatgtttgtaaatattatgaCCGGCGAAGTTGTTGTGGAATAG
Protein Sequence: MGLQDAERDIVSCNSDSNDASSSHTDAPRDGTQDAPGQHSPGSATDDPKSQKQSRKAPRPIPQLIPLNASTPNQKISGEPPAKKFKESMSSELIGKFENLPEDITLIPVNVPNKETAVRKKNNSFFDKLKERLLTETGEEGSLKCKSCGFESKCLSEHSVHEKNCSSQANRITMSPALPTKGSTRCQNCRHRCKSSADLYVHMQTCGKKNNVSGESATGSKYNNEASTSQLEKEAEPHPMENVVFVWNNINQESSKFDRPLDININDDSTITDLSRHYDTEAADENEGMNLSPNTLSLGKNVYKCPDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAVPVLNENGENEFHYVDPNTTVDASMEVDESYGNDSADMMHAAYEMQPLNLQTQTTDKYNMDNRNVDNKKPKKTLWKCKKCNYKDPSKEALLEHVRQHAREGADDTLQSNNKKLENAPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDQSQIPGHECVYSDLCTKCPFKANDKKQLFAHLQQHQPSPESIFKCYFCPYFVKDEQDLIQHLLLHGITDPEDYIAKAMGCRSPLPDRVLTDAPVPPNITKRHKCSECPYETNSKSQYMYHEQFHRLPPDTPYKCPECNYSVSKRHLLHQHLRVHGIHPSSDRKKNETEAELEASTAWQNKLDAKSDFADDLPFVWVSARDEFHKMYKCRYCSYVNSQKCKLPNHEKIHCLEFENSDVIIYKCLECKFTCDDPEKSAEHSKKHGLLYGRIYSYVEDGIPDEDQIAKLRRVIEQEKAVEESTKEENATSSESTENKIMFYCRKCPANYFNESEIKVHEKFHDRILEFKCKLCEFSVSEETEITTHEIVHSDDYHIRTHMHKFVHNYHSLYKPPKLESIRCPETSKTSWVVVVNKPVEYAEPVHKKSESKHTPKQYHCKECPAKFFKSSALSYHMGLHGGEGEHKCKKCSYAVKNVGNLAKHEILHEIENKPPDRCDYDSGEDMDYKNVPLSGTDLFQRKTEAIKRVLTDKDKLVRPNDHFPPVLLADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGSSGFTEPDNQDDDKKDDSGDNIKLAIKTMPKGAPKTDFQQFSIRDQQTLRLLQRRRSMNAGGKEADSNETSPAKERKLHMCLLCPYTNQRQDALNNHYRRHDAADILNIGNHKCSYCDLVVVQSHFLRDHLKTHFSYHKTLTPECFVANENVTFTISKVDEESEPLDLKLDVKSKIIFNEEKMFVNIMTGEVVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00790785;
90% Identity: -
80% Identity: -