Basic Information

Insect: Alcis repandata
Gene Symbol: -
Assembly: GCA_949125135.1
Location: OX421222.1:12964700-12972473[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.002 0.16 13.2 1.6 2 23 206 228 205 228 0.96

2 27 0.0018 0.14 13.3 0.6 2 21 264 283 263 284 0.92

3 27 0.00025 0.02 16.0 0.2 2 23 317 339 317 339 0.97

4 27 0.0063 0.5 11.6 0.3 1 23 402 425 402 425 0.97

5 27 6.2 4.9e+02 2.2 0.2 1 23 441 463 441 463 0.93

6 27 0.0011 0.086 14.0 0.7 2 23 506 527 505 527 0.96

7 27 0.00062 0.05 14.7 3.5 2 23 570 592 569 592 0.97

8 27 6.5e-06 0.00052 21.0 1.3 1 23 642 665 642 665 0.97

9 27 0.001 0.081 14.1 0.2 1 23 722 744 722 744 0.97

10 27 0.0034 0.27 12.4 6.7 1 23 755 777 755 777 0.98

11 27 0.89 71 4.8 0.4 2 23 789 810 788 810 0.93

12 27 0.0037 0.29 12.3 1.0 1 23 820 842 820 842 0.98

13 27 0.45 36 5.8 3.7 2 23 870 891 869 891 0.95

14 27 0.0078 0.62 11.3 4.9 1 23 902 924 902 924 0.97

15 27 0.00017 0.013 16.6 0.2 1 23 932 954 932 954 0.98

16 27 0.0037 0.29 12.3 0.2 2 23 974 996 973 996 0.97

17 27 0.17 14 7.0 0.3 1 23 1014 1036 1014 1036 0.96

18 27 0.053 4.2 8.7 0.5 2 23 1076 1098 1075 1098 0.95

19 27 0.021 1.7 9.9 0.2 1 23 1120 1142 1120 1142 0.97

20 27 0.19 15 6.9 0.1 2 23 1223 1244 1222 1244 0.92

21 27 1.1 88 4.5 1.3 5 23 1254 1272 1252 1272 0.92

22 27 0.0049 0.39 11.9 1.2 2 23 1283 1305 1282 1305 0.94

23 27 0.15 12 7.3 0.4 2 21 1322 1338 1322 1340 0.72

24 27 0.66 52 5.2 2.5 2 21 1344 1363 1343 1364 0.93

25 27 0.48 38 5.7 1.9 2 23 1412 1433 1411 1433 0.93

26 27 0.0045 0.36 12.0 0.1 2 23 1444 1466 1443 1466 0.95

27 27 0.06 4.8 8.5 1.4 2 20 1504 1522 1504 1524 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.002	0.16	13.2	1.6	2	23	206	228	205	228	0.96
2	27	0.0018	0.14	13.3	0.6	2	21	264	283	263	284	0.92
3	27	0.00025	0.02	16.0	0.2	2	23	317	339	317	339	0.97
4	27	0.0063	0.5	11.6	0.3	1	23	402	425	402	425	0.97
5	27	6.2	4.9e+02	2.2	0.2	1	23	441	463	441	463	0.93
6	27	0.0011	0.086	14.0	0.7	2	23	506	527	505	527	0.96
7	27	0.00062	0.05	14.7	3.5	2	23	570	592	569	592	0.97
8	27	6.5e-06	0.00052	21.0	1.3	1	23	642	665	642	665	0.97
9	27	0.001	0.081	14.1	0.2	1	23	722	744	722	744	0.97
10	27	0.0034	0.27	12.4	6.7	1	23	755	777	755	777	0.98
11	27	0.89	71	4.8	0.4	2	23	789	810	788	810	0.93
12	27	0.0037	0.29	12.3	1.0	1	23	820	842	820	842	0.98
13	27	0.45	36	5.8	3.7	2	23	870	891	869	891	0.95
14	27	0.0078	0.62	11.3	4.9	1	23	902	924	902	924	0.97
15	27	0.00017	0.013	16.6	0.2	1	23	932	954	932	954	0.98
16	27	0.0037	0.29	12.3	0.2	2	23	974	996	973	996	0.97
17	27	0.17	14	7.0	0.3	1	23	1014	1036	1014	1036	0.96
18	27	0.053	4.2	8.7	0.5	2	23	1076	1098	1075	1098	0.95
19	27	0.021	1.7	9.9	0.2	1	23	1120	1142	1120	1142	0.97
20	27	0.19	15	6.9	0.1	2	23	1223	1244	1222	1244	0.92
21	27	1.1	88	4.5	1.3	5	23	1254	1272	1252	1272	0.92
22	27	0.0049	0.39	11.9	1.2	2	23	1283	1305	1282	1305	0.94
23	27	0.15	12	7.3	0.4	2	21	1322	1338	1322	1340	0.72
24	27	0.66	52	5.2	2.5	2	21	1344	1363	1343	1364	0.93
25	27	0.48	38	5.7	1.9	2	23	1412	1433	1411	1433	0.93
26	27	0.0045	0.36	12.0	0.1	2	23	1444	1466	1443	1466	0.95
27	27	0.06	4.8	8.5	1.4	2	20	1504	1522	1504	1524	0.93

Sequence Information

Coding Sequence: ATGGCCCTTAAACTTGGAAAATGTAGATTATGTCTCAAGCTCGGCGATTTCTACTCCATCTTTACGGTCGACAATGCCGTACAACTTGCGGAGATGGTTATGGATTGCGCAAGAATAAAGGTATATGACGGAGATGGTTTACCAGATAAAGTGTGTGCTGAATGCATACAAAAGCTTAGCAGCGCCTACATATTCAAACAGCAGTGCGAGAGATCTGATCAAGAGTTACGGAGGAACTATGTCCCTCCACCAGGCTTCAGTATCAGTCCACCACCTCCAAATAGACAAAGTAGCGATTCAGCATTTTCAACACATACAGACAGCTCCAACTTAAAGTCATCCTTCATAGATAGCAAAGTAACACCTGtcaaaagaaatagaaaaagaagCGTCGAAAGCGATAATGCGTCTGAAGCTAGCCGGTCGCAGGACTACAGCCAACCCAGCAGCTCCAAACGCGTGGACGAGCTCCGTAGAACGCAGAAAAGACCACGACTTACCACCAACTCCAACAACTCTCAGTGTGATTCCGATTACGAAGACAATGGAGGCTCGAGCTACGTTCCAGAGACGGATATCGATTCTGACGAGCCACTCATTAACCCCAACGAAAACAAATGCGAAATCTGCAAAAAAACTTTCCGCTGGAAAAAGACTTTAAAAGCTCACGTAAAAAATATCCATGGAAGGAAGGATAGTTTCGATGCGGCCCTCGCTGCCAATTCGGTCACTGCCGGCAGCACACCAAATAATAAAACTGATACGTCGCTCGAAGACGACGAGAAGCTCAGTTGCTCCCGATGCGACAAAACCTTCAAACTGAAGATTATGTTAAAGAGACACTTAGAATCATGCACGGGAAAGCCGCCTGTGAAGACGCCGCAAAAAGAGTTGTTTATATCCTTGGAACCAATCGATGCTGTACATAAGATCACGGTAAAGAAACCCACCTGCGAGTACTGCACGGCCATATTCAAATCTGtcgaaaatttagaaaaacatCTCAGAGTTGTGCATGCGGCTGTTTTGAAGAAAGAGATCGATACAAAAGTTGCGAAAGCAGGTCCGCAACCGAGCCTGCAGTTCAAGGAGGGCTCCAACGTGTTCACCATTCCATGCGTCTACTGTCAGACGCCATTCGACGATTACTACGTTCACCAGTCCCACTTCACCACGTGTCCAAAAAAGGACAAGCGCTCGTCTTTCGAATGCCCAATCTGTCTGAAGGTGTCGAACCGGAAAAATGGTTACTTTATCCATATAAAGAACATCCACTTCGAGCCGCGAGCGAGCAAGCTCGAGGACCCATCGGAGGCTTCCTTCGAATGTCGCCTGTGTTACAAGAAATTACTCTCGCAGGAAATGCTCGTTACGCATTTAGCGGCGCACGCGTCTAACATAGAGGATGACAACGATGACACCGTGCACGATGATGGCGACTCGAGACCAAGTACGTTTGACGATTCTGCGTCCATGCACTCTGCTCACAGTACACCCGCTCCTGGTGGGTTAATAAAATGCCGCGTATGCGACAAAGGCTTCAAGTACCGCAAGTCGCTCGCTTCTCACGAAGCGAAACACACTGAAGAGGAAGTTAGAGTGAAAACCGAACCTCCGGACAGACAGTCCATGAGTTTACTAAGCGAGACCCACGAGCGAGTGTCTGATTTCGAATCTAGTCAAGATGACGATGAAGCGGACGACCTAACCTGTGACATTTGCGAGAAAATGTTCTCCTACAAACGCCTACTTGACCATCACAAGAGAACAAAGCACAACATGTCTTCAGGCACGAAGCGAGCGAAAATAAATCTTAAAGACTGCTCCGTAAGGTGCTTGCTGTGCGACTTGGAGATGAAAGTTAGTGCCATTAATGAGCACAACCAGAAGCACATCTCAATGAACATCAAGCCGAGGAATATCTACACATGCGCCGAGTGCGGGCAGAAGTTCAAGAGCTGTAGTAATTTGGCGAATCATATTAAACTAATTCATAGGTTGAAGCAGACAGAAGATCAAGTGCCGCGGCAGTTCATGGGCGCGGACCTGGCGGATTTTTGTGAAGTCGTTGTGACAAAGGCGGAACCCCTGGACCCAATCCAGAGTCACAACGACTTTGGCGAGGTTTCGTCTCAGGCGGCTCCGACAGTGGACCTTAGCGGGTTCACGTGTCCCATCTGCGGCAAGAAAATGGCCACCCTCCTCTCCCTGAAGCGCCACGTGAACTGGCACTCGTACGTCGGGGCCAACCTCGAGAAGAAATACGAGTGCTTCGTGTGTAAGGAGACATTCAAGTTCCAGTGCCACTACAAGGTGCACATGCGCGCGCACTACCACGACCCGCACGTGGACGCGGCCCTGCTGACGTGCGCCGTGTGCGGCCGCCGCAGCAAGCACCTGCGCGCGGCGCAGGCGCACAGCAACTGGCACAAGCAGACGCGCTTCCAGAACAAGGACTACCAGTGCTCCATCTGCAAGCGCGTCTTCCAGTACAGGAAGGTCTACCTGTCCCACATGGCCATTCACTACAAGAAGGGCGAGAGCGCCATGAACACCGTGGTGGGAGACAGGCAGGGGGCCGAAAAGGAACCCCTCGATGGCACTTCGACTTGCCACCTCTGCGGGAAGGTCTGCCTGTCCGAGATCTCCCTGAAGCACCACCTCATCTGGCACAAGTCGAAGACTCTTCTATACGGGGCGCGGCACGAGTGCCAGATGTGTCGGCTGCAGTTCACCAACAAGCGGCACCTGGAGCTGCACACGCGCGCGCACTACGAGGACGAGAACGGACCCTACAAGTGCAGTGTCTGCGGCAAGGGGTACATCGACGAGGAGTACATGCGGCGCCACGTGAAGGGGCACAACTTCGACCACTCCTCGCACAAGAAGCGGCTCGAGAAACTTCGAAAGGATAAGGTCAAGTGCCCGATTTGCTCCCGGTTCTACCCCGACGTGGTGCGACTGATCCGTCACCTGCGCCGCACGCATCCCGAGTCCAAGATGATCAAGGAGGACCcggacgcgccgccgccggcctaCTTCTCCTGCAAGCTCTGCGCGAAAGTTTTCCTCGACGAGGCGCGACTGAAGAAACACGAGGAGATGCACCTGCGCAAGCCGAACTTTTTCCGATGCAAATTCTGCGCTCGAAAGACGATATCCCTCAAAGCGCACAACGCGCACATCAAGGCGCACCTGACGAGGAAGCACGTGGACAACCCGCTGAAGTGCCCGGAGTGCGCCGAGACCTTCGTGCTGGGGTACGCGCTGCATCACCACCTGCGGGACGCGCACGGGGTCCGCGAGACGTGGATCGCGGAGCGCGCCGACGCGCCGCTCGAAGGCCCTCTTAAAGAGTTCCAGTGCGCGGTCTGCATGAAAGTCCTCGCGAGCAAAGGGAACTTCGAGCGGCATCTCGACTACCACAACTCGCTGCGCTGCAACTACTGCTTCGACTACTTCGGCGGGCTGCGCTTCCTGGAGGGGCACCTCGCCTTCAGCTGCGACAAGAAGAGGCTGGTCGGCGACACCGAGGTCCATCCGCGGCGCATCAAGTGCCAGCTGTGCTACAAGGCCTTCCACCTCCAGGTAAAGCTGGACTGCCACCTGCGCGCGCGGCACGGCGTGGCGGTGGAGCGGCGCGCCGGCGCGGCCAGCGCCGACACGGTGTGCGACTACTGCTTCCGCGCCTTCGAGAACGAGTTCGCGCTGGCGGGCCACCGGGTCTACCACCGCTCCGTCGGCTACTTCGGCTGCATCTACTGCGCGAGGAAGTTCAACACGCGCGCCGCCTACAACCGGCACAAGACGCAGCACCTCTACACGCTCAACGCGGACGACCCCACCAAGTGCGAGCACTGCGACAAAACGTTCGTCGCCTTCCGGGACATGATCGACCACATGAAGGACGAGCACGGCGACGACAAGGAGTGGATCGTCGAGCCGAAGGAGTCGACGGAGGAGAGGTGCCCGATATGCGACAAGATGTTCTACAACCTGCCGCGCCACCTGCAGTACCACGAGGAGAACAAGTGCAAGAAGTGCAACGAGTACTTCCGGTCGCGTCTCGATTTCGACAATCACCTGTGCGCGATCGAGAGCGACGCGGAGGAGACGTTCGGCGAGGATACCCCGGCGCGAGCTTACGAGGAGTGCACCTTCTGTTTCAAACCGATCACCAAAAAAGACTCGAAGAAAAAGCACGATATCCTGCACAAAACGTCGGGCGCGATTTCGTGCCGCTTCTGCCACCTCAAGTTCAAAACGATCGACGCGTTCAACATCCACGCGTTCTCCCACCGCAGCCGCAAGTACGCGAAGCGGCCGATCAAGTGCCGCGTCTGCGGCGAGCGCTTCGTCAAGTACGGACCCTTCATCAAGCACATGAAGGCGGCGCACAAGTCCACGAAGAAGCTGCACTACCGCGCCGTGGTGAAGCCGGAGCGCTGTGTGGTGTGCGGCGAGTTCTTACCGAACCTGCACAACCACTACCGTGCGCATCTCGTCAACCGCTGCCAGCTGTGCGACAAGTACTTCGCTTCGTCCCGACTTTACATGCGACACGAGTGCGACAAGGAAGACGCGGATCCCACCAAAGTTTTTACGTCGGACGCGGACCTGCCCGCGCTCATCGCCTCCTACGTCGCCAAGGACGAGAAGGACGACGAGAAGTTCTACGGGTACACCGACGACGAGGACGAGCCGGAGCCCGAGGCGAAGGAGGACGAATTGCCGTCGCGGCCGAAACCTAAGACAGTCAAGACCTACTCGAAGCCGGCCAAGCGGGCTCGCGTCTCCGAGTTGCCGGCGCCGCTGGACACCCAGCTGGCGGAGGACGAGCGCAACCTGCACTTGATGGTGCAGTCTCCGATCATCTCGGAGGTGCTCTCCCTCTACCAGAAGCAGGAGGCGGACGTCGACTCCAAGAGTCAGGGCTGCGAGGTCGTCGATCTCAGCGACGATTCTCTGGACGCGACCGACTTAGCCGCGCCCGTCATTGTCATCGACGATTCTAATTAA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNAVQLAEMVMDCARIKVYDGDGLPDKVCAECIQKLSSAYIFKQQCERSDQELRRNYVPPPGFSISPPPPNRQSSDSAFSTHTDSSNLKSSFIDSKVTPVKRNRKRSVESDNASEASRSQDYSQPSSSKRVDELRRTQKRPRLTTNSNNSQCDSDYEDNGGSSYVPETDIDSDEPLINPNENKCEICKKTFRWKKTLKAHVKNIHGRKDSFDAALAANSVTAGSTPNNKTDTSLEDDEKLSCSRCDKTFKLKIMLKRHLESCTGKPPVKTPQKELFISLEPIDAVHKITVKKPTCEYCTAIFKSVENLEKHLRVVHAAVLKKEIDTKVAKAGPQPSLQFKEGSNVFTIPCVYCQTPFDDYYVHQSHFTTCPKKDKRSSFECPICLKVSNRKNGYFIHIKNIHFEPRASKLEDPSEASFECRLCYKKLLSQEMLVTHLAAHASNIEDDNDDTVHDDGDSRPSTFDDSASMHSAHSTPAPGGLIKCRVCDKGFKYRKSLASHEAKHTEEEVRVKTEPPDRQSMSLLSETHERVSDFESSQDDDEADDLTCDICEKMFSYKRLLDHHKRTKHNMSSGTKRAKINLKDCSVRCLLCDLEMKVSAINEHNQKHISMNIKPRNIYTCAECGQKFKSCSNLANHIKLIHRLKQTEDQVPRQFMGADLADFCEVVVTKAEPLDPIQSHNDFGEVSSQAAPTVDLSGFTCPICGKKMATLLSLKRHVNWHSYVGANLEKKYECFVCKETFKFQCHYKVHMRAHYHDPHVDAALLTCAVCGRRSKHLRAAQAHSNWHKQTRFQNKDYQCSICKRVFQYRKVYLSHMAIHYKKGESAMNTVVGDRQGAEKEPLDGTSTCHLCGKVCLSEISLKHHLIWHKSKTLLYGARHECQMCRLQFTNKRHLELHTRAHYEDENGPYKCSVCGKGYIDEEYMRRHVKGHNFDHSSHKKRLEKLRKDKVKCPICSRFYPDVVRLIRHLRRTHPESKMIKEDPDAPPPAYFSCKLCAKVFLDEARLKKHEEMHLRKPNFFRCKFCARKTISLKAHNAHIKAHLTRKHVDNPLKCPECAETFVLGYALHHHLRDAHGVRETWIAERADAPLEGPLKEFQCAVCMKVLASKGNFERHLDYHNSLRCNYCFDYFGGLRFLEGHLAFSCDKKRLVGDTEVHPRRIKCQLCYKAFHLQVKLDCHLRARHGVAVERRAGAASADTVCDYCFRAFENEFALAGHRVYHRSVGYFGCIYCARKFNTRAAYNRHKTQHLYTLNADDPTKCEHCDKTFVAFRDMIDHMKDEHGDDKEWIVEPKESTEERCPICDKMFYNLPRHLQYHEENKCKKCNEYFRSRLDFDNHLCAIESDAEETFGEDTPARAYEECTFCFKPITKKDSKKKHDILHKTSGAISCRFCHLKFKTIDAFNIHAFSHRSRKYAKRPIKCRVCGERFVKYGPFIKHMKAAHKSTKKLHYRAVVKPERCVVCGEFLPNLHNHYRAHLVNRCQLCDKYFASSRLYMRHECDKEDADPTKVFTSDADLPALIASYVAKDEKDDEKFYGYTDDEDEPEPEAKEDELPSRPKPKTVKTYSKPAKRARVSELPAPLDTQLAEDERNLHLMVQSPIISEVLSLYQKQEADVDSKSQGCEVVDLSDDSLDATDLAAPVIVIDDSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00634735;
90% Identity: -
80% Identity: -