Arep000281.1
Basic Information
- Insect
- Alcis repandata
- Gene Symbol
- SNAPC4
- Assembly
- GCA_949125135.1
- Location
- OX421221.1:2531165-2532857[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.11 1.2e+02 3.5 0.0 1 15 20 34 20 36 0.87 2 5 4.1 4.5e+03 -1.5 0.0 22 45 106 130 102 131 0.79 3 5 1.5e-06 0.0016 19.1 0.1 1 38 137 176 137 181 0.95 4 5 1.4e-06 0.0015 19.3 0.1 2 45 191 237 190 238 0.80 5 5 6.7e-13 7.4e-10 39.4 0.0 3 43 245 285 243 287 0.95
Sequence Information
- Coding Sequence
- ATGTTGTCAGAATCTAAACATGGATTAAAAGAAATAGCAGAAGTGATAAAGCAACTGAAAGTTGATTTCACACCTGAAGAAGATACCAACATCAAGCAAGCTCAAATgtacaagttttatttttgtcatatgGGCCAAGTGCCTGGTTGGACAACAAAAGACAGAACAGAGTTCTTCGACGCAATTCTAAGAATGTCCCGGGATATTAAAAGAAAAGAGCTAAGGAATACAATATCAgaattacaaaaagaaataaagcaaCTTGATAAAAAAACGCTAAACGAGCTTGCGTTGCCACTGGAGAGCCAAGAATACGATTGGAAAGTCTTGGCCAATTCCTTGACTCGAGTGCATACGGAACAAGAATGCCTGGCTGTATGGACAATGTTATTACACCCTAAAATTAACAAGACCAGTTGGTCAGAGGCTGAGCAGCAAGAATTGCATGAAATTGCTACAGCTAATAACTATGAAGACTGGGATACCATTGCCAAACAATTAAACACAAGACGCTCTGCATATCAGTGTTTTGTGTCTTACCGTACACCCATGGCAGACAATACTTTACCTGATAAATGGTCAAAGGAAGAAATGGAACACCTACAACTAACGGTTAACTTTCACGAAAAGAGTGGGCACATCCCCTGGGATGAAGTAGCATCCGTTATGGAGCACACTCAGAAACAGgtctataataaatatatgacaATGGCACCAAGCACCTGGACAAGAAAGTTTTTAAAGGAAGAAGATGTGGTTCTATTGAACTACCATGAAAAATATGGGAATGATTTTCAAAAGATAGCAGAGTTAATGGTAGGCAGAACAGCAGAGAAGCTAAAACATCGCTTCAATTTGTTGACTAAGTTAAGGCAGTCCACTACATGGCTTGTGAAGGATGACAGAAAACTTCTACAAATTATGACTAAATCCGCAGAGTCCCCGCCGGCGGCCGAGTCGAGCGCGCCGGCCGAGCCCTGCGACCCGGCGGCGCGCCTCGTTTCCGAGCTCTCCGAGAGCCTGCGCCTCGCCGACCTGATGCACCGGCGGCCCTCGCCCGCGGCGCCGCCcctcgccgcgccgccgcccctcaccgcgccgccgccgccgccgccgctcgccgACGATCCCAAGGAAACCGTCTCGCCGATCGACCTGAAGGCGAGCCTTCGCAAGACCTCCTTTTCCAACAACGCCGAGCGTCGCCTCGAGGGCGACGTGCGGGGCACGGACTTCAAATCGCAACTCAAGAAAGTGGAAACGCACAAGAAGTCCGCCGGCgccccacgttgggcgccagTGTCACGACTCGGTTTTAGGCgaggtttataa
- Protein Sequence
- MLSESKHGLKEIAEVIKQLKVDFTPEEDTNIKQAQMYKFYFCHMGQVPGWTTKDRTEFFDAILRMSRDIKRKELRNTISELQKEIKQLDKKTLNELALPLESQEYDWKVLANSLTRVHTEQECLAVWTMLLHPKINKTSWSEAEQQELHEIATANNYEDWDTIAKQLNTRRSAYQCFVSYRTPMADNTLPDKWSKEEMEHLQLTVNFHEKSGHIPWDEVASVMEHTQKQVYNKYMTMAPSTWTRKFLKEEDVVLLNYHEKYGNDFQKIAELMVGRTAEKLKHRFNLLTKLRQSTTWLVKDDRKLLQIMTKSAESPPAAESSAPAEPCDPAARLVSELSESLRLADLMHRRPSPAAPPLAAPPPLTAPPPPPPLADDPKETVSPIDLKASLRKTSFSNNAERRLEGDVRGTDFKSQLKKVETHKKSAGAPRWAPVSRLGFRRGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -