Basic Information

Insect: Alcis repandata
Gene Symbol: ct
Assembly: GCA_949125135.1
Location: OX421241.1:2481927-2506310[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 5.8e-27 4.1e-23 81.8 0.0 3 70 144 212 142 219 0.94

2 3 1.9e-31 1.4e-27 96.2 0.0 4 77 543 617 541 619 0.96

3 3 9.5e-31 6.8e-27 93.9 0.0 3 75 746 819 744 823 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	5.8e-27	4.1e-23	81.8	3	70	144	212	142	219	0.94
2	3	1.9e-31	1.4e-27	96.2	4	77	543	617	541	619	0.96
3	3	9.5e-31	6.8e-27	93.9	3	75	746	819	744	823	0.95

Sequence Information

Coding Sequence: ATGCTCCGCTCACTAGAGCTAGGTCCGAGTGAGCGAATGGAGCGAATGGAGCGGAAGGTCGAGCGGCCGCCGAGCGCCGCTCCGAGCAGTGTGAGCGAGCGCGAGCGAGTGCGGGAGGAGCGCAACTCGATGGAGAGGGAGCGAAGCGCCGAGAGAAGAGACCAAGGTGGCGAAGAGTGGCCCGGGACGCCGCCGCTCAACAACAACACGACGCACCACAACAACAACGGGCCGACGCCgctgccgctgccgccgccgagCCCCTTTCGCTTCGACGAGCACCGCCCCTACCGGTTCGCGGATGACATGGGCCCGCTGCCGCCCGGCGCGCTCGTCGGACGCCTAGGAGACTCCCTCATACCCAAAGGCGACCCCATGGAAGCGCGCCTCCAAGAGATGCTCAGATATAACATGGACAAATACGCGAATAGTAACCTTGACACTTTACACATAAGTCGGAGAGTCCGAGAATTGCTATCGGTCCATAATATTGGACAGAGACTGTTTGCAAAATATGTGCTGGGACTCTCACAAGGAACAGTGTCAGAACTGCTATCGAAACCGAAGCCCTGGGACAAACTGACGGAAAAGGGCCGGGACTCGTATAGGAAGATGCACGCGTGGGCCTGCGACGAAGCCGCCGTCATGCTTCTGAAGTCTCTGATCCCTAAAAAAGTGGGCACCAAAGATGGCACCATCGGGCCCGGATACGGCCGATCGGAGGGCGACGGCGACGAGCGCTTGGCGCACATCCTCGAAGCATCCCACATGATGAAGACTCCCTCGCAAGCCAACAACGATGACTCCAGGAGCAATGAAGACTCCAGCTCGCCTAGGACGCAGTGTCCGTCGCCTTTCTCCAATAAGGACTCGAGCCAAAACCGGAGGATAAAGAAGTACGAAAACGATGACATTCCGCAGGAGAAGGTGGTGCGCATCTACCAGGAGGAGCTGGCCAAGATCATGAGCAGACGAGTCGACGATATTCGCCACAACCGGGAGGGGTTCCCTGGCATGTTTCCGCCTTTTTTCAGCGGCGGCATGCCTCCACACATGGAGCGGCCACCTGAGGACATCCGCATGGCTCTCGAGGCGTACCACCGCGAGCTGGCCAAGATCCAACCTGGCTCCAACATTCCCAACCTCCACAACCTGCCCGGTATGCCGCCCTTCCAAAACTTGCTAGCCCTCCAGCAGCAAGCCATGCAAGCCCAGAGCCAGCACCTGAACGGGGCGCAAGCCGTGCAGGACCTCTCCCTACCTAAGGACAAGAACGCCAAAATAAATGGAATGACTGATAGCGATAAGGAACGATCTATGGATGCCGAAGAGGCTATACGGCACGCGCGCAGCGCTTTCTCTCTCGTACGGCCGAAGCTGGAGCCGGGCCAGCAGTCGACCGGCTCGTCAGCGTCAAGCCCGCTCGGGAACGCGATCCTACCGCCTGCGATAACACCCAATGACGACTTTAGCAGTTCGACGGCAGCCAGCCCCTTGCAAAGAATGGCATCGATTACAAACAGCCTGATCTCTCAACCTTCTAACCCTCCACACCATCCGACCCCACAGCGGTCTATGAAAGCGGTTCTTCCACCGATCACGCAGCAGCAATTCGATCTCTTCAACAATCTTAACACGGAGGATATTGTGCGAAGAGTGAAGGAGGGCTTGAGTCAGTATTCGATAAGCCAGAGGTTATTTGGGGAGTCAGTGCTAGGGCTGTCACAAGGTTCGGTGAGCGACCTGCTGGCGAGGCCCAAACCCTGGCACATGCTGACGCAGAAGGGTCGGGAGCCTTTCATTAGAATGAAGATGTTCCTAGAAGACGACAACGCGGTACACAAGTTGGTCGCGTCACAGTACAAAATCGCGCCAGAGAAACTAATGAGGACCGGCAACTATAGCGGAGCACCTACATGTCCGCCGAACATGAACAAGCCGATGCCCCCGACGCAGAAGATGCTCTCGGACGCCACCTCCCTGCTCAGCAAGATGCAGCAGGAGCAGCTGCTGGGCGGCGCGCACCTGGGCCACCTGGGCCAGCCCGCGCCGCTGCTGCTCACTCCGCCCGGCTTCCCCCCGCACCACGCCGTCACCCTGCCCCCGCAGCACCCACACCACGATAACAACAACAAGGAGCGCAAACCCCCACCCCCGCCGCACCACCCGCCGCCCGTACTCCGCAGCTTACACCAGCATATCTCTCCCAGCGTCTACGAAATGGCCGCGCTCACGCAAGACCTCGATACGCAGACGATCACGACCAAAATTAAGGAGGCTCTGCTCGCGAACAACATCGGCCAGAAGATCTTCGGCGAGGCGGTGCTCGGCCTCTCGCAGGGCTCCGTCAGCGAGTTGCTATCCAAACCGAAACCGTGGCACATGCTCAGCATAAAAGGCCGGGAACCGTTCATCAGGATGCAACTCTGGCTCAGCGACGCGCACAACATCGACCGTTTACAGGCGCTGAAAAATGAGAGACGAGAAGCGAACAAGCGGCGGAGATCCAGCGGGCCCGGACAGGACAACTCCTCGGACACGTCTTCCAACGATACGAGCGAGTTCTACCACTCCAGCTCGCCGGGGCCCGCGGGGGGCGGAGGCGCGCCGTGCGCCAAGAAGCAGCGCGTCTTATTCTCCGAGGAACAGAAAGAGGCGCTCCGGCTCGCATTCGCGCTCGACCCTTACCCCAACATGCCGACCATAGAGTTCCTGGCGGCGGAGTTGGGACTCTCCACGCGGACTATAACCAACTGGTTTCACAATCATCGCATGAGGCTGAAGCAGCAGGCTCCACACGGGTTGCCGGCGGAGCCGCCGGCGAGAGATCAGGCCGCGGCGCCCTTCGACCCGGTTCAGTTCAGACTCCTGCTGAATCAGAGACTACTCGAGCTGCAAAAGGAGCGCATGGGACTCGCGGGAGTTCCGCTTCCGTACCCGCCGTACTTTGCGGCGAATTCCAACCTAGCGGCGCTGATAGGTCGGGGTTTAGCGCCACCCGAGGAGGCTAAGGACCCCGCCGGCGGCTTAGATTTATCCATGCCGCTGAAACGAGAACCCGACACGGACGATTTCGAGGATGACGACGTGGACAGTAACCTGGGGTCGGATGATTCGTTGGACGACGACGCGAAAGCTGAGCCTAAAGCGACGTCCACACCGTCAGGCGGCGGCTCCCGGTCGAGCCGGCGCAAGCCCGCCGCGCCGCAGTGGGTCAACCCCGACTGGCAGGAAGACAAGCCTCGCAACCCCGACGAGGTCATCATCAACGGCGTGTGCGTGATGAGAGGAGACGACTTCCGGCGCGACTCGGCGCCGTCCCCGGTGCGCGTGGAGCCGGCGCCGGTGCCGCGGGACTCCTCCCCctccgcgccgccgcccccgccccgcacGCCCCTCACCCCGCACGATGACGTCATACCCGAAGACAAAATCAAAGCGGAAGCGGACGACGATCGGTGGGAGTACTAG
Protein Sequence: MLRSLELGPSERMERMERKVERPPSAAPSSVSERERVREERNSMERERSAERRDQGGEEWPGTPPLNNNTTHHNNNGPTPLPLPPPSPFRFDEHRPYRFADDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANSNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAVMLLKSLIPKKVGTKDGTIGPGYGRSEGDGDERLAHILEASHMMKTPSQANNDDSRSNEDSSSPRTQCPSPFSNKDSSQNRRIKKYENDDIPQEKVVRIYQEELAKIMSRRVDDIRHNREGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGSNIPNLHNLPGMPPFQNLLALQQQAMQAQSQHLNGAQAVQDLSLPKDKNAKINGMTDSDKERSMDAEEAIRHARSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNDDFSSSTAASPLQRMASITNSLISQPSNPPHHPTPQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEGLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPTCPPNMNKPMPPTQKMLSDATSLLSKMQQEQLLGGAHLGHLGQPAPLLLTPPGFPPHHAVTLPPQHPHHDNNNKERKPPPPPHHPPPVLRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPAGGGGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQAAAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLAPPEEAKDPAGGLDLSMPLKREPDTDDFEDDDVDSNLGSDDSLDDDAKAEPKATSTPSGGGSRSSRRKPAAPQWVNPDWQEDKPRNPDEVIINGVCVMRGDDFRRDSAPSPVRVEPAPVPRDSSPSAPPPPPRTPLTPHDDVIPEDKIKAEADDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01338275;
90% Identity: iTF_00390264;
80% Identity: iTF_00044350;