Aseg026754.1
Basic Information
- Insect
- Agrotis segetum
- Gene Symbol
- Zfhx3
- Assembly
- GCA_036375495.1
- Location
- JAQSVV010000317.1:76082-91767[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.00037 0.033 15.6 1.8 2 23 11 33 10 33 0.95 2 18 9.1e-05 0.0082 17.5 0.7 1 23 65 89 65 89 0.92 3 18 0.013 1.2 10.7 0.4 1 22 137 158 137 161 0.91 4 18 0.043 3.9 9.1 4.9 1 23 545 568 545 568 0.95 5 18 0.19 17 7.0 0.0 1 23 575 598 575 598 0.95 6 18 0.0041 0.37 12.3 2.5 2 22 653 673 653 676 0.91 7 18 0.35 32 6.2 0.6 1 23 688 713 688 713 0.94 8 18 0.017 1.5 10.4 1.3 1 23 731 753 731 753 0.97 9 18 0.002 0.18 13.3 0.3 2 23 760 782 759 782 0.96 10 18 0.00036 0.032 15.6 3.1 1 23 888 912 888 912 0.92 11 18 0.015 1.3 10.5 0.7 1 22 932 953 932 956 0.89 12 18 0.0015 0.13 13.7 0.2 1 23 1003 1027 1003 1027 0.93 13 18 2.3 2.1e+02 3.6 0.1 3 21 1102 1120 1101 1121 0.90 14 18 1.1 97 4.7 3.5 2 19 1211 1228 1210 1233 0.91 15 18 3.8e-05 0.0034 18.7 2.9 1 23 1742 1764 1742 1764 0.99 16 18 0.001 0.09 14.2 0.3 1 23 1850 1872 1850 1872 0.98 17 18 0.0094 0.85 11.2 0.4 2 23 2010 2032 2009 2032 0.97 18 18 0.42 38 6.0 1.6 2 22 2262 2282 2262 2285 0.88
Sequence Information
- Coding Sequence
- ATGCATAGTCGAAATTCCTGCAAAACCTTGAAATGTCCGAAGTGCAATTGGCATTACAAATATCAAGAGACATTAGAAATACACATGAAAGAGAAACATCCTGAAGCTGAGACGAGCTGTATTTACTGCATAGCTGGACAACCTCATCCACGGCTGGCACGTGGAGAAACCTATACCTGTGGATATAAACCATATCGATGTGAAGTGTGCAATTACTCGACTACGACTAAGGGAAACCTAAGCATACACATGCAATCagataaacatttaaataatatgcAAGAGCTTCAAAATGGTGGCAATCCTGGCGAAGGCACTCTACCTCCTGCGCCACAACATACTCCTCCTGGCCCACACAAGCCACCACTGCCACATCATTCTCCCTTGGGTCAAAAACCAAAGCCAACTTTCCGCTGCGACGTTTGCAATTATGAAACTAATGTTGCGCGAAACCTAAGGATACACATGACTTCTGAAAAGCATACCCACAACATGTTGGTTCTACAGCAAAACGTGAAACATATGCAGACGTTATCAGCTCTGCATCACAGACAACAAAGCCAACAACAGCTTGAAAGCTTACTGCATTTTCATGGCGGTGATGCCCCTCCTCCTAATCCTGAGGCTGCACTCGCCGACATGGCTTACAACCAAGCGTTGATGATCCAACTCATGACAGGAGGGCCCGGTCCCTCACCACCTGAGCTGGGTGCTCATCTTGACGTTGGCCTAAATCCAGAGGCAATGGAACCGCCACCAGAACCAGCTGACCCAGAGCCAGAAAGAACATACCATTGTTGCATCTGCAATTGTTTCTCAACAGACTCCTTAGAAGCGCTAGGTCATCACTTGGCCCAAGACCGAACGAAGATCAGAGAACAAGAGATCCTGGCTTTAGTAGCTGGTCATTACGTTTGCAAGCTCTGCACATACAAAACTAACTTAAAGGCCAACTTCCAACTACATTGTAAAACAgataaacatttgcaaaggctGCAGCATGTGAACCACGTGAAGGAAGGTGGTCCAAGAAACGAATGGAAACTGAAGTTCTGCGGTGGTGTTGGTACTGGTGGTGCGAGCGTTGGTGGCGTGCAAGTTCGCTGCTGCGCGTGTGATTACTATACTAACTCTGCGCATAAGCTTCAGCTTCACGCAGCTGGCGCGAGGCATGAGGCTGCTGCCTTATTATTGCGACATCTTCGTGAGTGTGCGGCGCGTATCCCTCGAGAACGACCGCGAGTGTACCGTTGTGCTCTCTGCGGCTTCGGAGCCCCTCACCGGTTGCCACTGCTACAACACGTTCGATCTGTCAAACATCTGCAGATGGAACAAATCCATCAGCTCCAACGTCGGTCTGAGGGCAAAGATCCAACGCCTGACGTCGCTGAGCTGTTCCAAGTGATCCCTCAACCCAGTGATATGCAAAGCCCGTACGATCAGCAAGATAATGACACCAAGGAGCCAATCGACCAGAAGCCTGAATTGACTCAAGAGCAGAAGATGATGAGATTTTTGGAACAACATCAGCAGCAACAacagcaacaacaacagcagcagcagcagctTGTGCAACAACAAACTCAACAAGGCCCCAGTGAGCGGGAGGAGGAACGCGAGACACCGGGACCACACACGTGTCCTTATTGTAACTTTAGTTGCTCGAACGAGTCTCGCCTACACGCACATGTCTCCTCCGTACATGGCGATCCCTCGCGACATTTCATTTGCCCTCTTTGCCAAGATGGCTTCAAGGAGCGACCAGCCCTCGAACGACACGTCATGCAAATCCATTCCGTTAACTCTGAAGGTCTACAGAGATTATTATTACTTGTTGACCAAAGCCATTGGTTGAACGGTGGAACCCAATCTCAAAGAGACGAATCTCGACAAGGAGATGACGAAAGGGAGATATCCTCGCCTCGATCAGAGGGCAGTGCTGATGGCGAAACAGAAAGATGCTCAACATGTAACCGTACTTTCCGAAACGTTGATGAATTGTGTCAACATCAGAATGAGTCCGGCCACCTAGAACTGAAACAAACGCCTCAAGGGCCGGGCTACGTGTGCTGGAAGAAAGGATGTAATCGGTATTTTGACGCTGCTCATGCACTGCAGAATCACTTCAGAGAAGCGCACGCACGTAACTCTATCACAAACATGTCAGTGTCAGAGAAACATGTGTATAAATACCGTTGCAATCAATGCAGTCTAGCTTTCAAGACGATTGAAAAACTACAGCTACATTCACAATATCACGTTATCAGAGATGCTACCAAGTGCGTGTTATGCGGAAGAAGTTTTAGATCTGTGTTGGCACTTCAAAAGCACGTTGAGACGTCCCACCCGGAATTATCTGAAGAAGAACTCAGTGCATTCAAGCGAAGCTTAGCATCGAACCCTTTGTTACAAGCTGCCCAAGGCACAGCTTTAGATGCCGCAACAGCTGAGCTCTTACGCAAAGAAGCTCTAAGAACTCCCGATGATGACCTAGCTGATATGGAAGACAGAGATTCCAGCGCTACTGTCGCTGATGAGTCCGGTCATAATGACGCTGAGAACTCCGATGACTCAATTATTTACAAAGATCAACAATTCTTGGAAGATTACCTAAACTCCCAAGCAATGGCGGAAGACTCATACAATGACCCCAACAGAAAGTACAAATGCCATCGATGCAAGGTAGCCTTTACACGCCAATCGTACTTGACTGCTCATAACAAAACACTCCTCCATAGAAAAGGTGAAAAACTAACCTACCCCATGGAAAAGTACCTTGACCCAAACAGACCATTCAAATGTGATGTATGTAAAGAATCGTTTACGCAAAAGAACATTTTGCTGGTACACTACAATAGCGTGAGCCATTTGCATAAATTAAAGCGAGCTATGCAAGAAcaacagaataataataatcctcCCGTGTCGCCCGGGGCAGGCTCGGCACCCTCTAATTTGACACTCACTCCCAAGAGTACATCGAGTGAGGAGGATGACCGCAAACGATATAAATGCAACATTTGCAAAGTTGCGTACACGCAAGGAAGCACGCTCGACATTCACATGAGGTCAGTTTTGCATCAAACACGCGCTGGCAAGTTACAAGAGCTCGCCGCAGCTGGACACGTGGACTTGTCAAGGCCTTTGGTTGAGCAACCGGACCGGACCGACCCCGCCAAAATTTTACAAGACGTGTTGTCGCCGAAAAATACATCCCCTTCGTCTACAAGCAGTGGGGGCCCGCGTTCCTCGCCCCCTGCTCGCCCAGGTAGTCCGCGTTCCCCGCGCGCAGGTAGCGCTTCGTGCGATCGCTGTCACGCGTCATTCCCAACCGGGGAGCTACTCGACGCACATCGAGCGACCTCATGTCCGTTTGGCGATGCGCGGGCGCATTCGCCTCTAGGTGAAGCTGAAACAGCTGCACTTGACGAGATGGTCGCCAAGGGCAATCCGCCCAAACGCAATTCACAAATGTATAAGCAACTGTTAGAAACTTTCGGCTTCGATCTCGTCATGCAATACAATGAAAATCAACGAAGAAAAATGCAAGAAGAACGAGAGATGGCGCGCGTACCAAGTCCGCCGCCACCGCCTCCTGAAGAGAAGCCCCCGGATGGTGAAACTAAATCGACGTGTCAACATTGCAACAAGGAGTTTTCTAGTGTGTTCGTTCTTAAAACTCATTGTGAGGAAGTGCATAAGGACAAAGTACCGTTGGAATTCCTGGAGCAGTTTGCTGAGCAGTTCAAATCGGAATACGAGAGGAAGTCTGGTGCGCCCAACTCCCCGCGCGCTGCGTCTCCGGCGCCGCAGGGTGAGAGGTCACCGTCTCCACGTGGTGATAACAGTGGGAACTTCAATGAGAACGGTAACACGCAAGGCGATGCGCAAGCTGGTGCGTTACTAGCAGCGCAAGTGCAAGAGATGCAGGCTGCTTTAAATATGAtccaactgcagcagcagctggGACAGTTGCACCCGATGGTGGCTCAAATGCTATCGTTGGGCCTTCCTCTCGGTTTGAACGTGGGAGCGCTGGCGGCGATGAACCTACAACCACCTCTGGTTCCGCTGATGCTGCCGCCTCCTCCATTCGACGCGATGCCCTTCGCACACGACGCACAAATGAAGCAACAACAACTATTACAGCAGCAGCAACAGgCTAACGCTGCAGCTGGTCAAAAGAGGGCTCGCACTCGCATCACCGACGAACAATTGAAGATTTTGCGAGCGCACTTCGACATAAACAACTCGCCCAGCGACGAGGCTATCGCGAAAATGGCCCAACAGTCTGGACTCGCAACCAAGGTAATCAAACATTGGTTCAGAAATACCCTTTTCAAGGAGCGTCAGCGGAACAAGGATTCACCATACAACTTTAACAATCCTCCCTCCACAACGCTCAACCTCGAGGAGTACGAGAAGACTGGTGAGGCTAAAGTAACAACTTTGGATTCATCAGCAAGCTCGGATGAAGGCAAACCACCGCCcgaaaaaaaggcaaaaattgaAGATACTAGTATGATGATGCAACAGGAGGTAAAGTCAGAGCCTAACGACGAGCCATCAATGGAGGAGAAGTACAACTCGTACGATGATCGCCACCAAGAAGATAAAAGTTTTATCTTTCCCCAAGCGCCATCACAGAGTCCAGCACCATTAATACATACAAATGACCACCATCATCAAAATAAATCGCGACCGCAAACTCCCACCCATATGTCGCTGAACTCGCTGATTCAGTCTCAGTTAGATTCAATCCCGGCTACGACAATACCGCAGCCGCCTCATCCATCGATGCTTCCACCAAAACTGAATCCTAACTTCACGTCCCCAAACTCCGCGCCCCCGAACGTCCTACCTTTGACCCCGAATCGCAGCCTCAGTCCTGGCAGGGGACCGGCCGATTTCGGACTTTCCGGGGGCAATTCGAACGGATCCAACAGCTCAACGGGGTCTTCTGGCAAACGCGCCAACAGAACTAGGTTCACAgactatcaaataaaagtattaCAAGAGTTTTTTGAAAACAACGCATATCCCAAAGATGATGATCTCGAATATTTATCAAAGTTACTGGGATTGAGTCCAAGAGTAATAGTGGTATGGTTTCAAAATGCGCGCCAAAAAGCGAGAAAAGTCTATGAAAACCAACCAGCTGCAGACCCACCTGCGAGCGCTACAGATGATGCCAACAGATTTCAGCGTACTCCAGGTCTTAACTACCAGTGCAAAAAGTGCCAATTAGTATTCCAAAGGTACTATGAACTCATTAGACATCAGAAGACTCATTGTTTTAAGGAAGAAGATGCTAAAAGATCAGCACAGGCACAGGCGGCAGCAGCTCAAGTGGCTGCCACATTGAGCAGTGAGGACTCCAACTCGAGTAATGTTGAACACCACCCTCCGCATGTGCCGGTCtcgcccgccccgccccgcaCGCCCACTCCCGCGGCGCCTACCTACCCAGTCTCTCCAGCACCACCAGCGCCTTTAACGCCAGTCACTCCATTATCACACGCACCCCGTGAAGAAAAAGATGGAAATTTTCAATGTGATAAATGCAACCTAGTCTTCCCTCGGTTTGACTTATGGCGGGAACATCAACTTGTTCACATAATGAATCCAAATTTATTCCCCACATACCCGCCGGATTCCCCTTTTGGGATTCTTCAGCAGCACGCGCAGCTGCAACAGCTAAATGCGTCCCTTGGGAGTGATGAGGCTCGCCATCCTTTAGTGGCAGCTCTTAATCAACAAGTAGCAAAGAGGAAATTCGACGAATACGAAGAAGTTGAAACTGGTGAACAGCCAAAAGACAAACGCTTGAGAACTACAATTCTACCAGAACAACTGGATTACCTCTACCAAAAATACCAAATCGAATCTAACCCATCGCGAAAAATGCTTGAAAACATAGCACGCGAAGTTGGGTTAAAAAAAAGAGTGGTACAAGTTTGGTTTCAAAATACACGAGCACGTGAGAGGAAAGGACAGTTTCGTGCGCATGCACAAGTGATAAACAAGCGATGTCCGTTTTGTCCAGCTTTGTTCAAGGTAAAGAGCGCATTAGAAAGTCATTTGAGCACTAAACACGCAGATCAGTGTGCGAGAGGCGAAATCAATGTCGACGCGCTGCCTGACGAAGAGTTAAGTACAGAATCTACACCGAGTTTTGGCTCCCAACAAAGTGACCGGCAGCAAAATTTTTCCCAAGCGGGGGCTCCCATGTTGCCCCCTATTTTTCCACCTTTTCACTCAGACATGGAGAAATTTATCAAGCAGTACAGTGAGGAGTCAATGAAGCGCTATGTAACTGAATTACAAGCACATGCCGCCGCCCAACAAAACGGTGGTGGGAACAATGAAACATCTGAGCGACGCCCAGAACATGGAAAATCAGAGATACCCTTAGATCTCAGCAAACCTGTTGATCTGTCAAGACCCGGGTCGGACGCCGATGAGCGTTCTGACACCGCTTCCGAGACCATGGAGTTCTACGAAGAAGACGAGCCGACCTCGCCACTACCCGGTCAACAGCAATCGGCGCGTCCCCCGGGTAAGCGATACCGCACGCAAATGTCATCCTTGCAAGTCAAAATCATGAAATCGTTATTCGGTGACTACAAAACTCCCACTATGGCCGAGTGCGAGGCGCTCGGGCGGGAAATCGGGCTGCCCAAACGCGTGGTGCAAGTTTGGTTCCAAAACGCACGTGCCAAAGAGAAGAAGGCGCGCCTAGCCGCCGGGCTTATGGAGGTGTCTGACGCGCCGCCGCCGGAAGAGTGTCGAGTGTGTGACTTCAAATACAGTCACAAGTACTCGGTGCAGGACCACGTGTTCACTCGCGGCCACATTGCGGCCGTGCGCGCGCGCCTCGagagcggcgcgggcggcggcgaggACAGCACGCTGGCGCTCATGCAGATGGCGGCGCGCCTCGAGAGCGGCATGGGTGGCGACCTGCACAACGCGTTCCTACGGCCCCAGCTCGCCGGAAACGGTGAGTGTACAACTTGA
- Protein Sequence
- MHSRNSCKTLKCPKCNWHYKYQETLEIHMKEKHPEAETSCIYCIAGQPHPRLARGETYTCGYKPYRCEVCNYSTTTKGNLSIHMQSDKHLNNMQELQNGGNPGEGTLPPAPQHTPPGPHKPPLPHHSPLGQKPKPTFRCDVCNYETNVARNLRIHMTSEKHTHNMLVLQQNVKHMQTLSALHHRQQSQQQLESLLHFHGGDAPPPNPEAALADMAYNQALMIQLMTGGPGPSPPELGAHLDVGLNPEAMEPPPEPADPEPERTYHCCICNCFSTDSLEALGHHLAQDRTKIREQEILALVAGHYVCKLCTYKTNLKANFQLHCKTDKHLQRLQHVNHVKEGGPRNEWKLKFCGGVGTGGASVGGVQVRCCACDYYTNSAHKLQLHAAGARHEAAALLLRHLRECAARIPRERPRVYRCALCGFGAPHRLPLLQHVRSVKHLQMEQIHQLQRRSEGKDPTPDVAELFQVIPQPSDMQSPYDQQDNDTKEPIDQKPELTQEQKMMRFLEQHQQQQQQQQQQQQQLVQQQTQQGPSEREEERETPGPHTCPYCNFSCSNESRLHAHVSSVHGDPSRHFICPLCQDGFKERPALERHVMQIHSVNSEGLQRLLLLVDQSHWLNGGTQSQRDESRQGDDEREISSPRSEGSADGETERCSTCNRTFRNVDELCQHQNESGHLELKQTPQGPGYVCWKKGCNRYFDAAHALQNHFREAHARNSITNMSVSEKHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRDATKCVLCGRSFRSVLALQKHVETSHPELSEEELSAFKRSLASNPLLQAAQGTALDAATAELLRKEALRTPDDDLADMEDRDSSATVADESGHNDAENSDDSIIYKDQQFLEDYLNSQAMAEDSYNDPNRKYKCHRCKVAFTRQSYLTAHNKTLLHRKGEKLTYPMEKYLDPNRPFKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQQNNNNPPVSPGAGSAPSNLTLTPKSTSSEEDDRKRYKCNICKVAYTQGSTLDIHMRSVLHQTRAGKLQELAAAGHVDLSRPLVEQPDRTDPAKILQDVLSPKNTSPSSTSSGGPRSSPPARPGSPRSPRAGSASCDRCHASFPTGELLDAHRATSCPFGDARAHSPLGEAETAALDEMVAKGNPPKRNSQMYKQLLETFGFDLVMQYNENQRRKMQEEREMARVPSPPPPPPEEKPPDGETKSTCQHCNKEFSSVFVLKTHCEEVHKDKVPLEFLEQFAEQFKSEYERKSGAPNSPRAASPAPQGERSPSPRGDNSGNFNENGNTQGDAQAGALLAAQVQEMQAALNMIQLQQQLGQLHPMVAQMLSLGLPLGLNVGALAAMNLQPPLVPLMLPPPPFDAMPFAHDAQMKQQQLLQQQQQANAAAGQKRARTRITDEQLKILRAHFDINNSPSDEAIAKMAQQSGLATKVIKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYEKTGEAKVTTLDSSASSDEGKPPPEKKAKIEDTSMMMQQEVKSEPNDEPSMEEKYNSYDDRHQEDKSFIFPQAPSQSPAPLIHTNDHHHQNKSRPQTPTHMSLNSLIQSQLDSIPATTIPQPPHPSMLPPKLNPNFTSPNSAPPNVLPLTPNRSLSPGRGPADFGLSGGNSNGSNSSTGSSGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVIVVWFQNARQKARKVYENQPAADPPASATDDANRFQRTPGLNYQCKKCQLVFQRYYELIRHQKTHCFKEEDAKRSAQAQAAAAQVAATLSSEDSNSSNVEHHPPHVPVSPAPPRTPTPAAPTYPVSPAPPAPLTPVTPLSHAPREEKDGNFQCDKCNLVFPRFDLWREHQLVHIMNPNLFPTYPPDSPFGILQQHAQLQQLNASLGSDEARHPLVAALNQQVAKRKFDEYEEVETGEQPKDKRLRTTILPEQLDYLYQKYQIESNPSRKMLENIAREVGLKKRVVQVWFQNTRARERKGQFRAHAQVINKRCPFCPALFKVKSALESHLSTKHADQCARGEINVDALPDEELSTESTPSFGSQQSDRQQNFSQAGAPMLPPIFPPFHSDMEKFIKQYSEESMKRYVTELQAHAAAQQNGGGNNETSERRPEHGKSEIPLDLSKPVDLSRPGSDADERSDTASETMEFYEEDEPTSPLPGQQQSARPPGKRYRTQMSSLQVKIMKSLFGDYKTPTMAECEALGREIGLPKRVVQVWFQNARAKEKKARLAAGLMEVSDAPPPEECRVCDFKYSHKYSVQDHVFTRGHIAAVRARLESGAGGGEDSTLALMQMAARLESGMGGDLHNAFLRPQLAGNGECTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00213858;
- 90% Identity
- iTF_00006114;
- 80% Identity
- iTF_00043305;