Aseg000408.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agrotis segetum
Gene Symbol
TY3B-I
Assembly
GCA_036375495.1
Location
JAQSVV010000002.1:3832910-3838005[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-08 4e-05 24.2 0.0 2 31 1300 1329 1299 1329 0.97

Sequence Information

Coding Sequence
atggccaacaACGATCAAGAACTTTCCGGTGTGTCGACTTCGCCGCGCATTCCACCCATCTGGCGCGACAAAATTCGTCTATGGTTCGCGCAATTCGAAGCCATCATGTCCGTGCAGAAGAAAAGTGACCAAGCCATGTTCGAGCTCGTCATCGGTCAACTAGAGCGACAAGACCTCGACGAAATCTCAGACATAATTCTCCAACCACCTGAGAAGAACCGATACGACGCGTTGAAGAATCGATTGTTCCAAGTTTACGAGGAATCCGAGCAAAGAAAAGTGCAAAGGCTGCTGTCAGAAATGGAACTTGGCGACATGAAGCCTTCACAGCTGCTACGTCGCATGAAAAACCTCGCCGCTGACAATATCTCCGACTCAGCCCTGCGGATAATGTGGACCAACCACCTACCGCAATCTGTTCGCGCAGTCCTCGCCGTCAGTGATAACATCGCGAAACACTCCGATATCCACGAGCTGGCAATGATGGCAGACAAAATCCTCGAGCAGACGCAACCACTTGGCGCAGTCGCCGCAGTTACCTCCGTTCCCACCGCCCCGAGTGCATCTACGTCAATTGAAGAGAAAATCGACGCGCTCACCAAAGAAATCGCAGAGCTAAAAGCATACCGATCGCATCAAAATCGACGCAGATTCGACAGACGACATTCAAGATCACGTTCATCAAGCCGAGCCAATCGCAGTCGCGCACGAAACGACCAATCAGAGACTTGTTTCTATCATCGCAAGTTCGGCAAAGAGGCCCGAAGGTGTACGCGTCCCTACAAAAACTCACGTCTGTCATTCCTTATTGATACTGGCGCCAACGTCTCCGTAATACCACGAAGAAAAGGCGGAAATACTACATCAACAGATTTTTGCTTGTATGCAGCGAACAACACAGTAATTCCAACGTACGGAGAGAAAACATTACAACTGGATCTCAACCTACGAAGACCATACACGTGGAAGTTCATCATCGCTGCAGTCAGCAAACCCATCATCGGTGCCGACTTCCTGAAACATCATCAACTTCTTGTCGACATAGCCGGCCGATGTCTAGTCGACAAAGTTACCAATCTCACAGTCAAGGCACCAGTCACCTATTCCGCTGAGCCTACAGTAAGAAGCATCGACATTGACCAGCCATATCATCAGCTTCTCAGCAAGTTCCCCGACATCCTACGACCATCATGCATGAAAGATACTCCAAAGCACCGTGTAGAACATCACATTGAAACTACCGGTCCTCCAGTACACAGCAAGAGCAGGCCGCTACCACCACATCGGTACTTGGCCGTGAAGAAAGAATTCGAGTCTATGATGCAGCAAGGAATATGCCGTCCAAGCAAAAGTCCTTGGTCCAGCCCGCTACACGTCGTCCCAAAGAAAAACGGCGATCTTCGTGTATGTGGCGACTACCGCAGACTCAATGACGTCACGAAACCAGACCGCTATCCAGTGCCACGTCTCAAAGATTTTACCTACCTGCTCCACGGGAAGAAGATCTTCACGACACTCGACCTAAACCGCGCTTACCAACAACTGCCTGTTTACGAACCAGATATTGAGAAAACAGCCATTACAACACCCTTCGGCTTGTTCGAATTTCCACGAATGTGTCCTGGTCTCAAAAACGCCGGACAGACATTCCAACGATTCATTCATCAAGTGCTCAACGGGTTAGACTACGCATTTCCATTCATTGATGACGTCATCGTCGCATCAAATGACGAAACTAGTCACATCGAAGATCTACAGGAGGTGTTACGCAGATTAGACGAGTATGGCATCACTATAAATCCATCAAAATGCGTCTTCGGCAAAGAAAACGTCGAATTCCTGGGTTATCAAGTGTCCAGCAACGGAATCAAACCACCACAAGATAAAGTCACTGCCGTCACCGCTTATCCCAAACCCGAAACAATAGAAGACTTACGTCGATTTATTGGAATGGTAAACTTTTATCGTGACAGCATACCAAACGCCGCACACATACAAGCACCTCTCAACGCGTTCCTGCACAATTCGAAGAAACGCGATAAGACAAAGATCAACTGGAACACAGAAGCGATACAAGCATTCGAGTCATGTAAAGTCAGCATACAAAACGCAGCTTTACTCGCTCATCCATCTCCATCACCAAACGACGCCATCTCCCTCATGTGCGACGCTTCAGATACCTGCGCGGGAGCTGTACTTAAACAGTATGTCAACAAGAAATGGATACCGCTTGGCTACTTCTCAAAGAAATTCTCCGAAACACAACAGCGATACAGTACATTCGACCGAGAATTATTATCAATCTACATGGCAATCAAACACTTCCGAAAAATGTTCGAAGGAAGAGAACTAACAGTCTACACAGACCACAAACCGCTGACCTACGCTATTCGCAAGCCTCCGTCCGATAACGATACGCAACGGCGCACGCGTCAGCTATTGTTTATCAGTGAATTTACGACCGACATCCGGCACGTTAGCGGTGTGAACAACGTTGTCGCCGACGCGCTCTCACGCATCGAAACCATCGACTTCCCATCACCCATAAACTACGAAGAACTATCCCAAGCACAAGAAAAAGACAGCAATATACCAACCCTAtcacaacaaacaaatattcaaCTCAAGAAAATCGTCATGCCCGGAACTAGCAAACCAATATTCTGCGAGACGTCTACGTCACACATTCGTCCATACCTACCAACTGAGTTTCGTCGCATCGCATTCAACGCCGTGCACAGTGCAAGTCACCCTGGTATAAGAACTACGCGCAAACTCATGCAAGAGCGTTACTTTTGGCCAGCAATGAACATCGACATTGGCGAGTGGACGAAAACATGCACTTCGTGTCAACTATCGAAAGTACAACGACACAATCACAGTGACGTCACATCATTCCCACCGAGCGAACGATTTCAACACATCCACGTCGATATTGTTGGACCGCTACCTACATCTTCGTGTGGACATCGATACCTACTCACGATGATTGACCGCTGTACACGATGGCCCGAAGCAGTATCACTTCAAGAGATAACCGCCAAAGTCGTCGCAAGAAAGCTGTACGAAACATGGATATCTCGTTTCGGTTGTCCTACAAGAATAACGACTGATCAAGGACGACAGTTTGAAAGTCGACTATTCCAAGACCTTGCACAACTACTTGGAGTAGAAAAAACCCGTACTACTGCCTACCACCCGCAGAATAACGGCATCGTCGAACGCTGGCACCGATCACTGAAAGCCGCACTCATGTCTCGACTAGAAAACAGCAACAAATGGATCGACGAATTACCTACTGTTTTAATGGGTCTACGAGCCGCCACGCGCACCGACACCAACACAAGTGCCGCGCAGCTCACTTACGGTCAAGCAATACGACTACCCGGCGATTTTATATCACCATCACCAGCCGTAGCGAAGATGGACCACACCTACGTCGATCAGCTGCATGACGCAATCACGAAGCTGACACCTACATACAAGCCGCATTCAAACAAACGGTGTATGTTCGTGCACAACGACTTATCAACATGCAGTCACGTGTTTGTACGAGATGACACCGTCCGCAAGCCACTTCAACACCCATACAAAGGCCCATTCAAGATTATAGAGCGCAAAGAGAAATACTATACGATTCAACTACCAGATCGACATACCAACATATCAATCGAACGTCTCAAGCCGGCGTACTCTATCAACATCGAGGACAAACATACGAGTAACGAGACACATCAACCAGCGGCAGCTACCACTGAAGATTACTCCAGCCTTCCTCCAGCGACGAACACCAGCGAACAGCGCACGAGATCAGGCAGGATCATCAAGACACCCGTACGCTTCGCTAAGGGGGGGaTGGCACGAAATTATAAAAGGAAAACGACCGACAAATACCCTCGAGAAACTCTGCTGGCAGCTGTTACAGCAGTACGGGAGAAGCAGATGACGGCGTTGAGGGCGTCTACAGTTTATGGTGTTCCTAGATCAATCTACACTTAA
Protein Sequence
MANNDQELSGVSTSPRIPPIWRDKIRLWFAQFEAIMSVQKKSDQAMFELVIGQLERQDLDEISDIILQPPEKNRYDALKNRLFQVYEESEQRKVQRLLSEMELGDMKPSQLLRRMKNLAADNISDSALRIMWTNHLPQSVRAVLAVSDNIAKHSDIHELAMMADKILEQTQPLGAVAAVTSVPTAPSASTSIEEKIDALTKEIAELKAYRSHQNRRRFDRRHSRSRSSSRANRSRARNDQSETCFYHRKFGKEARRCTRPYKNSRLSFLIDTGANVSVIPRRKGGNTTSTDFCLYAANNTVIPTYGEKTLQLDLNLRRPYTWKFIIAAVSKPIIGADFLKHHQLLVDIAGRCLVDKVTNLTVKAPVTYSAEPTVRSIDIDQPYHQLLSKFPDILRPSCMKDTPKHRVEHHIETTGPPVHSKSRPLPPHRYLAVKKEFESMMQQGICRPSKSPWSSPLHVVPKKNGDLRVCGDYRRLNDVTKPDRYPVPRLKDFTYLLHGKKIFTTLDLNRAYQQLPVYEPDIEKTAITTPFGLFEFPRMCPGLKNAGQTFQRFIHQVLNGLDYAFPFIDDVIVASNDETSHIEDLQEVLRRLDEYGITINPSKCVFGKENVEFLGYQVSSNGIKPPQDKVTAVTAYPKPETIEDLRRFIGMVNFYRDSIPNAAHIQAPLNAFLHNSKKRDKTKINWNTEAIQAFESCKVSIQNAALLAHPSPSPNDAISLMCDASDTCAGAVLKQYVNKKWIPLGYFSKKFSETQQRYSTFDRELLSIYMAIKHFRKMFEGRELTVYTDHKPLTYAIRKPPSDNDTQRRTRQLLFISEFTTDIRHVSGVNNVVADALSRIETIDFPSPINYEELSQAQEKDSNIPTLSQQTNIQLKKIVMPGTSKPIFCETSTSHIRPYLPTEFRRIAFNAVHSASHPGIRTTRKLMQERYFWPAMNIDIGEWTKTCTSCQLSKVQRHNHSDVTSFPPSERFQHIHVDIVGPLPTSSCGHRYLLTMIDRCTRWPEAVSLQEITAKVVARKLYETWISRFGCPTRITTDQGRQFESRLFQDLAQLLGVEKTRTTAYHPQNNGIVERWHRSLKAALMSRLENSNKWIDELPTVLMGLRAATRTDTNTSAAQLTYGQAIRLPGDFISPSPAVAKMDHTYVDQLHDAITKLTPTYKPHSNKRCMFVHNDLSTCSHVFVRDDTVRKPLQHPYKGPFKIIERKEKYYTIQLPDRHTNISIERLKPAYSINIEDKHTSNETHQPAAATTEDYSSLPPATNTSEQRTRSGRIIKTPVRFAKGGMARNYKRKTTDKYPRETLLAAVTAVREKQMTALRASTVYGVPRSIYT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-