Aseg028760.1
Basic Information
- Insect
- Agrotis segetum
- Gene Symbol
- clz9
- Assembly
- GCA_036375495.1
- Location
- JAQSVV010000433.1:142928-145483[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-11 5.3e-08 33.4 0.0 6 43 9 45 7 46 0.94
Sequence Information
- Coding Sequence
- ATGACTGATAGGCAAAAGGTAATATTAAAGGCCATGGAGGCGGTTCAAAAAGGAGCCTCAATTTCAGCTGCTGCCAGGGAGTTCGGCATCCCACGGTCTACGTTGGATGACAAATTACGCGGCCGCTATTCTGTCGAATGCTCCAAGGGACCGGCTACAGTTTTGacgaaagaagaagaagaacatTTAAGCAGGTGGATTATTTTTATGGCAAATAGTGGGTTTCCCGTAAATAAGGCACAGTTATTGGATAGCGTGAGTTTATTGGTGAAAAAGATGAAGCGAGACAACCCATTTCATAATGGCAGACCAGGTCGTCATTGGTTTGAAGCTTTTATAAAGCGACACCCTGAAGTGGGCCAGCGAGTGGCCCAAAATTTGACGCAAACCCGAGCTTCAGTAAAAGAGAACGATGTTAGAGCATGGTTCAAAGAAGTGGAGGAGTATTTTATCAAGACGCATCTGGAAGGAGCAACTCGAGATCCATGTAGAATTTTCAATTGCGACGAAAGCGCTTTCTTTTTGTCACCGGCGGATAATAGAGTTCTCGCAAAACGAGGTGCAAAAAACGTATATAACGTTATCCCCAGCGGAGAAAAAGAGTGTGTGACAGTATTGGTTACGGCTAACGCAGCAGGTGAATTGGCGCCTCCgatggttttatttaaattaaagtccATACCACATAAGATTTTGAAAACGGCACCGAAAGACTGGGGATTAGGATTTACGCCAAAGGGATGGATGACAGGGGAGTCATTTTATGAATATATGACAAATGTCTTCTATCCTTGGCTCATTAAAACGAATATAGAATTcccaattattttcttcttagATGGACATTGCTCACACACGACACTGCCACTTAGCAATTTCTGTAGGGAAAAGAATATCCAACTGGTTGCATTATACCCAAACGCGACTCATTTAATTCAACCTATGGACGTGGCTGTGTTTAGACCGCTTAAAATGATATGGAAGAGATCGGTTTATGACTGGCGAAATGATAACCACTTCGTAAAACTACGCAAAGAAAATTTCTGTCCGCTGCTACATACATCTCTTACACAACTGGACCCCAACTCTATCAAAAGTGGATTTCGCAAATGCGGCTTGTCTCCATTTGATGCAAACGCCGTTGATTATTCTAAGTGTGTAACCAGTCAACCCAAAAAATCAGTCAAACCAGATAATTCTAACCAAATACAACCAGATACCATAAGCCATGTCAAATTCTTTGAATCACAAATAAGTCCTGAAAACCTCGAAGCTTTTTACAGCAACGGAAATGAAAGTTGGAAAGGGGATAAATCCTTAGAAGGATTATTCAATGTCTGGAGGCAAATGCATTTTCAAAATAATCTACCTTCAGACAGTTTCAATAATGACTCTTCGGCTTTGACAAAATTTTGTGCTCATGAAACGTCTAATATCAACGAACTGCAGCTGTCATCTGGAGATATTGGAAACTTCACAGGTATGACTGACATCTTGGATCCAAATTATTACTCAAACGAGCTCAGTGACTTCACAATGACTGAAAATGAAAGCCATGGAGGACAGatagaaatgtatgaaaatgttgATGGGATCTTGATGAAAATCATGGATGTGGAAATCCCAAATAATGACCCTTCACTGAcaaattttattgaagaaaacCAAACTCGTCCTGAAACTGAAGTACGAAACACACATAATTTATCAGGTCAAGTGATCCGAACAATAGGCTATAACCCTATATATATCACTTCTCGCAAAAATATTACAACAAACTCTGGAATAATAACAACAGCTATAACGCCGAATGTGGTTGAGACAGATACTATGAGTATGACACAGCCATCATTACTTACTAACACGACCTCCGTTACTGAATTAGTGCCGACACAAATACAATTTCAGTCAACTATGACACAATCATCATTTTCTAGCAAAGAACTCGTTCCTATAGCACCGCCAAGTAAAACATCACCAATTCATTTAAAGATGGCTGGTGATACAACTCCTAATCATACACCAAGCAGAATCAAAACATCCGAAAACGTGAAGACACCGCCACATACACCTATAGAACAAGCGTTACCCAAAGATGACAGCCGCAACCAAccaaaaactaaatattatgGAGATTTAGTTGTACCGACACCATTCAAAGACGCTTTATTTTGGCCAGAAACTCCTAATCTCACCACAAAAAGCAAAGTTAAATTACCTAGCGTGATAACATCTGATAGGTGGCAAATCTTTGCACAGAATAAGCTAGAAGCAAAGACAAGAAAAGAGGAGAATAAAGTTAAagcaaaagaaaacaaaagaaaaaaaactgagctTGGAGTTGGTAACAAGAAACCTAAGAAGAAATCAATAGATACTGGGGTGAGAGACATCACAAATGAAGATTGGTTTTGTCGGTTATGCCAAAGAAGCAAGAAATTGGACATGATAGAATGTGTGATTTGTAAGACCTGGTATCATACGATTTGTGCAGAAGTTTCACCAAATGAAATAACGTTTACTTGTATGTATTGTTACGTGTCGTTTGATGAATAA
- Protein Sequence
- MTDRQKVILKAMEAVQKGASISAAAREFGIPRSTLDDKLRGRYSVECSKGPATVLTKEEEEHLSRWIIFMANSGFPVNKAQLLDSVSLLVKKMKRDNPFHNGRPGRHWFEAFIKRHPEVGQRVAQNLTQTRASVKENDVRAWFKEVEEYFIKTHLEGATRDPCRIFNCDESAFFLSPADNRVLAKRGAKNVYNVIPSGEKECVTVLVTANAAGELAPPMVLFKLKSIPHKILKTAPKDWGLGFTPKGWMTGESFYEYMTNVFYPWLIKTNIEFPIIFFLDGHCSHTTLPLSNFCREKNIQLVALYPNATHLIQPMDVAVFRPLKMIWKRSVYDWRNDNHFVKLRKENFCPLLHTSLTQLDPNSIKSGFRKCGLSPFDANAVDYSKCVTSQPKKSVKPDNSNQIQPDTISHVKFFESQISPENLEAFYSNGNESWKGDKSLEGLFNVWRQMHFQNNLPSDSFNNDSSALTKFCAHETSNINELQLSSGDIGNFTGMTDILDPNYYSNELSDFTMTENESHGGQIEMYENVDGILMKIMDVEIPNNDPSLTNFIEENQTRPETEVRNTHNLSGQVIRTIGYNPIYITSRKNITTNSGIITTAITPNVVETDTMSMTQPSLLTNTTSVTELVPTQIQFQSTMTQSSFSSKELVPIAPPSKTSPIHLKMAGDTTPNHTPSRIKTSENVKTPPHTPIEQALPKDDSRNQPKTKYYGDLVVPTPFKDALFWPETPNLTTKSKVKLPSVITSDRWQIFAQNKLEAKTRKEENKVKAKENKRKKTELGVGNKKPKKKSIDTGVRDITNEDWFCRLCQRSKKLDMIECVICKTWYHTICAEVSPNEITFTCMYCYVSFDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01064591;
- 90% Identity
- -
- 80% Identity
- -