Aseg029557.1
Basic Information
- Insect
- Agrotis segetum
- Gene Symbol
- Mblk-1
- Assembly
- GCA_036375495.1
- Location
- JAQSVV010000499.1:5498-33073[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-14 1.1e-10 42.0 0.0 1 37 139 176 139 180 0.92 2 2 1.3e-18 1.4e-15 57.7 0.0 1 43 349 392 349 394 0.95
Sequence Information
- Coding Sequence
- AGTCCCGCATCGGAGTCGGACAGCAGTTCGGTGTCGGGGGCGAAGAGCCCGGCGTCGGCACCTCCGCTGTTGCAGCACCTTTTACAATTGCAGGCGCAGAACCCACAGACTATAGCACAGTTTCAGCAGATGCTGACGGCCCTGGCAGCGCTGGGCAGCGGGCtggtgccgccgccgccgctgtcgCAACCCTGGATGATGCAGCGGCTTGTGCAGAGACAGAATGAGAGGCTACCGGAGGAGAAGGCGCCGTCGTCTTCGTCCCCCAACCTTGCGGAGCAGCCTCTCGACCTGAGCGCCAAGTCTACCTCCAGCACCAGCGGCACACCACCTCCTGACTCCAAGCATTTGGATAACAGATTGAAGCGAGCAGTTCTCGAGGGCGCCAGTAATAGTTCTGGTCGCCGTGCGTACACTGAGGAGGAGCTGCAGTCAGCCGTGCGCGACATCCAGTCGGGCCGGCTGGGCACCCGGCGCGCCGCCCTCATCTACGGCATTCCGCGCTCCACGCTGCGCAACAAACTCAATAAGTTCGGCAACGTCGTCGACCACGCCGACTCCGACAACGACAGCGATGCTGACCGCGCCGACTCGCCGCCCTCTGTCATCCTCAAAATACCCACATTCCCCCCTCCTGATGACAAGAGTCCATCCCCCGCCGGACAACACCAAGCCCCCATCGCGCCCATAACACCGATGCTACCCACGGGTCAGCCTTCCCTCAAGGCCCCCTCACAGCTGTTGCTCCCGCCCTCGGTGTTCGCCGACCCTCCAGCAACACAGCACCTCTTCACGTCACTAAGTGATGTCATCGCTAAGAGCATCAGCCAAAAGTTCCAACAACCCTTAGATAGGCCGCACCACCAGACCGGTGAAATGATGTATGCGCGAGGTCCTGACCGACACGTGTCTGTAATCAAGACCCCACCTGACAACCAACGCTACCCTGCGCCCGGCAACTCCAAACAGATGCCAAACAACAACGGTCAGCCGGCCACTGGTGGCAAGGGCACGCGGCCCAAGCGCGGCAAGTACCGGAACTACGACCGTGACAGCCTCGTGGAGGCGGTGAAAGCGGTGCAGCGCGGCGAGATGTCCGTGCACCGCGCCGGCTCCTACTACGGCGTGCCGCACTCCACGCTCGAGTACAAGGTGAAGGAGCGTCACCTCATGCGGCCACGCAAGCGCGAGCCCAAGCCACCGCAGGACGCCAGCAAGCCGCAGCCTCCGAAACCGCAACCGCCCAAACCGCCGACGAAGCCGTTCTCCAACGGACTCAACGGGCCGGAAGCCCCGGGTTACCCTCCCGGCTACCCGTTCTGGCCGGGCAGCGGGTTCCCGCCACCACCCGCCCCGGACCTGTACGCCTCGCACATGATGCGACGACTACGCGAGGAGGCGCCGCCGCCCGCCAACGGCTCGTTCCTGGAGGGCATCATCCGCTCGAGCCTGGAGCGGCCCGCGCTGCTGCAGCGGCTGGCGGCCCCGCCACGCGCGTCCGACGGGTCGGAGCCGCCGGCGCGGCGGCCGCGGCTGGACAGCTCGGACCAGGCGCTGGCGGCGGAGATGCGCGACGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCGCGGGCACGCCGACccccccgcccgcgccgcccgcggagcccccgccgccgcccgccgcgccgcccgaccGCGCCTAG
- Protein Sequence
- SPASESDSSSVSGAKSPASAPPLLQHLLQLQAQNPQTIAQFQQMLTALAALGSGLVPPPPLSQPWMMQRLVQRQNERLPEEKAPSSSSPNLAEQPLDLSAKSTSSTSGTPPPDSKHLDNRLKRAVLEGASNSSGRRAYTEEELQSAVRDIQSGRLGTRRAALIYGIPRSTLRNKLNKFGNVVDHADSDNDSDADRADSPPSVILKIPTFPPPDDKSPSPAGQHQAPIAPITPMLPTGQPSLKAPSQLLLPPSVFADPPATQHLFTSLSDVIAKSISQKFQQPLDRPHHQTGEMMYARGPDRHVSVIKTPPDNQRYPAPGNSKQMPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDASKPQPPKPQPPKPPTKPFSNGLNGPEAPGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPPRASDGSEPPARRPRLDSSDQALAAEMRDAVQRLRADKLRPRAGTPTPPPAPPAEPPPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_00122280;
- 80% Identity
- -