Basic Information

Insect: Agrotis puta
Gene Symbol: -
Assembly: GCA_943137145.2
Location: CALPBO020000455.1:114423-117869[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.2 78 4.3 1.6 1 23 266 289 266 289 0.96

2 8 0.026 1.8 9.5 4.2 1 23 355 377 355 377 0.97

3 8 0.0016 0.1 13.3 2.9 2 23 382 403 381 403 0.96

4 8 0.00046 0.031 15.0 0.2 1 23 408 431 408 431 0.97

5 8 0.97 65 4.5 3.3 2 23 437 459 436 459 0.93

6 8 3.6e-05 0.0024 18.5 2.0 1 23 465 488 465 488 0.97

7 8 4e-06 0.00027 21.5 2.3 2 23 494 515 493 515 0.97

8 8 6.4e-05 0.0043 17.7 3.3 1 23 521 543 521 543 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.2	78	4.3	1.6	1	23	266	289	266	289	0.96
2	8	0.026	1.8	9.5	4.2	1	23	355	377	355	377	0.97
3	8	0.0016	0.1	13.3	2.9	2	23	382	403	381	403	0.96
4	8	0.00046	0.031	15.0	0.2	1	23	408	431	408	431	0.97
5	8	0.97	65	4.5	3.3	2	23	437	459	436	459	0.93
6	8	3.6e-05	0.0024	18.5	2.0	1	23	465	488	465	488	0.97
7	8	4e-06	0.00027	21.5	2.3	2	23	494	515	493	515	0.97
8	8	6.4e-05	0.0043	17.7	3.3	1	23	521	543	521	543	0.98

Sequence Information

Coding Sequence: ATGGATGTGGAAAACGCGGAGACCTGGGCATCGCAACCTGATGTGTGCCGCTGTTGCTTGTCTGCAAGCGGGACGTGGGATGTCACCGCTTCTTATATTACGGAGAACGGAACCAAAGAAGTTTACTCTGAAATGATGCAAGAGTGTTACGGATTTTCCTTGTCATATCTCATGGAGTGGGGTCCAAGTAGAATGGTGTGTGCACTCTGTGTGAGCCACCTAAGGGATGCATGCAGCTTCCGGAAGCAGGTGGAAGAAGCCGAGAGACACTTTGTAGCTTATTGTAGTAGAAAAGATATGATGAACCAAGAAACGATTAAGACTGAAATTGATGAAATACCTCATAATATAGAGAGTCCACAGTGTTCTAATACTATTGCAGAAGACAGTGAAGATGACAATAAAGAAATTTCAAAGACAGACACAGCAATTTTAGAAAAAAACAATACATTAAAAAAAGTCAAATCCAAGAGGCATGCAATTTTAAAAGGGAAAAGAAAGAGAAAAAGGATTGATTTGAAAGAAGAGGTCGATTCAGATACTCCTCTAACTGAGTTGTCAAAGAAAAATGTCCCAAAAGATGTATTGAGTAAGGAAGAAATTGAAATAACAGACAGTTTACTACAAGAAAATGATGTAAAAGATCTTCAGACTTCCGTTGTTGGAATAGGCTTCCAACACACAACCGTACAGAATGGAGTCAAACAAGTTTCTGAGCGAAAACGTGTCATGCTGACATGTGACACCGTCCTTAGAGATACTACCGCCTGTCCCTTCAGACATCACAAGAGCTGGTTCCAGTGCTTCTTCTGCCGACAGGATTTCATGGAAATAAACCTTCTTAGAGATCACACGCTGAAAACCCACGCAGACATAGACGTGGAAATCAAAAAAATAAAACGATACCCGCGCTCGTTTCAAATAGAAATTTCGAATCTCAAATGTCGGCAGTGTAATTTGAATTTGACAGATGTCATTTCGATGTGCCGCCATTTTGTTGAGGTGCACAAGAAGGTTATATACAAGGAGTGCATAGCTGATTACAAAGTTGACGCTAGTCCTTACTCTTGCCATTTATGCGGCTTACAGTTTCACGTTTTCAGAACGCTCACAACACATTTAAACGAGCATTATGCGAATTGTATTTGCGATGTATGTGGTAAATCATTTCTGAATTCAAAGCGCTTGAAAGTCCACAAAAGATCACACGAAAACGGCCAATTTCCTTGTGGGGAATGTGGCAAAATCCTTAAGACACAAACGTCAAGATCGAACCACATACAAACCGCTCACTCTAAACGTGTAATGAAGTGCCATATATGTTTTAAGCCCATGAAACATTATAATGATAGGATAAAACACATGTCAGAAGCCCATAACATAACTCATAAGTTCAAATGTCCGTATTGTGGACGAGAATATAACATAAAACATTATCTAGCTACACATATACGACAGACACATGGACAGAAAAACAAGAGTTGTTCTGAATGTGGTATGGCGTTTATAACTAATCACAGTTTGAAGAAACATATGTTGAAACACACAGGATTAAAGCCTTTTAGCTGTAATATATGTTGCAAGTCATATGCAAGGAATTATACGTTGAGGGAGCATATGAGAGTGCATGTTAATGAAAAACGTTTTGTAGAAAATGAATAA
Protein Sequence: MDVENAETWASQPDVCRCCLSASGTWDVTASYITENGTKEVYSEMMQECYGFSLSYLMEWGPSRMVCALCVSHLRDACSFRKQVEEAERHFVAYCSRKDMMNQETIKTEIDEIPHNIESPQCSNTIAEDSEDDNKEISKTDTAILEKNNTLKKVKSKRHAILKGKRKRKRIDLKEEVDSDTPLTELSKKNVPKDVLSKEEIEITDSLLQENDVKDLQTSVVGIGFQHTTVQNGVKQVSERKRVMLTCDTVLRDTTACPFRHHKSWFQCFFCRQDFMEINLLRDHTLKTHADIDVEIKKIKRYPRSFQIEISNLKCRQCNLNLTDVISMCRHFVEVHKKVIYKECIADYKVDASPYSCHLCGLQFHVFRTLTTHLNEHYANCICDVCGKSFLNSKRLKVHKRSHENGQFPCGECGKILKTQTSRSNHIQTAHSKRVMKCHICFKPMKHYNDRIKHMSEAHNITHKFKCPYCGREYNIKHYLATHIRQTHGQKNKSCSECGMAFITNHSLKKHMLKHTGLKPFSCNICCKSYARNYTLREHMRVHVNEKRFVENE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: iTF_00043997;
80% Identity: -