Basic Information

Insect: Agrotis puta
Gene Symbol: -
Assembly: GCA_943137145.2
Location: CALPBO020001023.1:214980-221628[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 5 3.4e+02 2.3 0.1 3 20 17 36 16 36 0.91

2 11 0.035 2.4 9.1 1.6 1 23 205 228 205 228 0.91

3 11 0.00011 0.0073 17.0 0.2 1 23 249 271 249 271 0.97

4 11 0.028 1.9 9.4 0.1 2 23 278 299 277 299 0.95

5 11 0.026 1.8 9.5 0.2 2 23 305 327 304 327 0.96

6 11 3.5e-06 0.00024 21.7 1.1 1 23 333 355 333 355 0.98

7 11 0.0005 0.034 14.9 0.1 1 23 361 384 361 384 0.92

8 11 0.00048 0.032 15.0 1.0 1 23 393 415 393 415 0.98

9 11 0.00047 0.032 15.0 0.8 1 23 423 445 423 445 0.95

10 11 1.9e-05 0.0012 19.4 3.7 1 23 451 473 451 473 0.98

11 11 0.00011 0.0074 17.0 0.8 3 22 481 500 480 500 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	5	3.4e+02	2.3	0.1	3	20	17	36	16	36	0.91
2	11	0.035	2.4	9.1	1.6	1	23	205	228	205	228	0.91
3	11	0.00011	0.0073	17.0	0.2	1	23	249	271	249	271	0.97
4	11	0.028	1.9	9.4	0.1	2	23	278	299	277	299	0.95
5	11	0.026	1.8	9.5	0.2	2	23	305	327	304	327	0.96
6	11	3.5e-06	0.00024	21.7	1.1	1	23	333	355	333	355	0.98
7	11	0.0005	0.034	14.9	0.1	1	23	361	384	361	384	0.92
8	11	0.00048	0.032	15.0	1.0	1	23	393	415	393	415	0.98
9	11	0.00047	0.032	15.0	0.8	1	23	423	445	423	445	0.95
10	11	1.9e-05	0.0012	19.4	3.7	1	23	451	473	451	473	0.98
11	11	0.00011	0.0074	17.0	0.8	3	22	481	500	480	500	0.96

Sequence Information

Coding Sequence: ATGGACAAAATATGCAGATTTTGTTTAAAATTATCTGTCAAAAACATGTGCAGTTTACAAGAATGCGATATACTTTTTAACTTACAAAGGTTTTTAAAGATACATATCCCTACAAATGAGTATTATCCGAAAAATTTATGCAAGGATTGCTTTAAAAATGTATCACAATTAATTAAATTCTGTTTAACTCTCAAAGAGAATGAAGACGAATTACAAAGTTATGCAAGAAATGGCTTATTAGAAGATTATTATGCTAGAATTACACACAATGTATTTATTAAAGATGAGGCTAAAGAGCCAGAAAGTAGATTGGATACTTTTGTAGTAAAAGTTGAAGACGAAATAGCCACAGAATACTATGAAGAGTATGAATTTTTAAAAAGTGAAGGTTCCTCTATGGAATTCAATGAAACCCGTTACAGTTCCGATGATGAGGCAGCACTATCATCTATGAAGAGGGAGAATGAACTTGAAATAAATATAGAAAAACAACGTGAAATAAATATAGAAGAAAAACCTGAAATTACAGAGTTCAAACCTATTCCTATAGGACTAGAAAATTTTAAAAGAAAAAGAAAAGATGAACCACAAATCTTTGAATTTGTTAAACAATTTACTTGTCTATCATGTTTAAAAGAATGTGAAAATCAATCGGATCTAGCTAAACATTATTATGCGGAACATTACAGTAATTCAATGCCTGGTAAAAGGTATACGGAAAGTAAATTGGAAGATAAGATTACATATACTTGTGATATTTGTGGAGAAACATTTGATTTGAAGAAGGATATTAGAAAACATGTTATGGGCCACTCTGATGAAAGACCGTTGACTTGTAAAATTTGTGCAAGAACATACAGGACTGTTCCAGACATAGTCCGTCACGCCAGGGCACACAACGGTATCAAGCTGCAATGCCCCTACAACTGTGGCTTCTCCACCGCTTACCAAGGAGCTATGAAGGAGCACACAAGTAAACACCTAGATGAGTACAAGTACACCTGTGACCAATGCGGCAAGGGTTTCAACACGAAGACGTGGTTTGAGCAGCATCAAAACCTTCATACGGGAGAGAAGCCGTTCGTCTGTGATATTTGTGGCGTCGCCTTCCCTATGTCCAGATATCTTCAAACCCATAGAGCTGCGAATCACCCGCAGTCTTCCAACTTGAAGCGATACAGATGCGTCCATTGTGGCGAGCAGTGTGACAGCGCCAATAGTCTTGCTATACATATGCAGGACCATGGTATAAAGCATGAAAAAGATTTTCTTTGTGACTTTTGCGGCAAGATTCTCGCGACGGCTTATCAACTGGCGTACCATCATAGGATGCACATGGGAGTCAAACCTTATTCATGCCATATATGCAAGAAGAAATTCGCGAAGAAGTACAATGTACAACTGCACATGACGATCCACTCCGGAGATAAGTCCCACGGCTGCAATCGCTGCGGCAAGCAGTATTCGCAGCGAAGCACCCTGCTCAGACATCTTAAAAGGTAG
Protein Sequence: MDKICRFCLKLSVKNMCSLQECDILFNLQRFLKIHIPTNEYYPKNLCKDCFKNVSQLIKFCLTLKENEDELQSYARNGLLEDYYARITHNVFIKDEAKEPESRLDTFVVKVEDEIATEYYEEYEFLKSEGSSMEFNETRYSSDDEAALSSMKRENELEINIEKQREINIEEKPEITEFKPIPIGLENFKRKRKDEPQIFEFVKQFTCLSCLKECENQSDLAKHYYAEHYSNSMPGKRYTESKLEDKITYTCDICGETFDLKKDIRKHVMGHSDERPLTCKICARTYRTVPDIVRHARAHNGIKLQCPYNCGFSTAYQGAMKEHTSKHLDEYKYTCDQCGKGFNTKTWFEQHQNLHTGEKPFVCDICGVAFPMSRYLQTHRAANHPQSSNLKRYRCVHCGEQCDSANSLAIHMQDHGIKHEKDFLCDFCGKILATAYQLAYHHRMHMGVKPYSCHICKKKFAKKYNVQLHMTIHSGDKSHGCNRCGKQYSQRSTLLRHLKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00043833; iTF_00041143;
90% Identity: iTF_00041143; iTF_00043833;
80% Identity: -