Aput007565.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agrotis puta
Gene Symbol
-
Assembly
GCA_943137145.2
Location
CALPBO020000283.1:388663-409517[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.0012 0.078 13.7 6.5 1 23 282 304 282 304 0.98
2 26 0.37 25 5.9 1.5 1 23 311 333 311 333 0.96
3 26 0.13 8.7 7.3 0.2 1 23 337 360 337 360 0.98
4 26 0.15 10 7.1 7.1 1 23 367 389 367 390 0.96
5 26 2.9e-06 0.0002 21.9 0.4 2 23 396 417 396 417 0.98
6 26 5.8e-05 0.0039 17.8 4.5 1 23 423 445 423 445 0.98
7 26 0.00064 0.043 14.6 1.8 1 22 451 472 451 476 0.93
8 26 0.053 3.5 8.5 0.1 1 23 484 507 484 507 0.94
9 26 0.079 5.3 8.0 0.5 1 19 513 531 513 536 0.95
10 26 0.17 11 7.0 0.5 1 12 545 556 545 562 0.81
11 26 0.17 11 7.0 0.5 1 12 576 587 576 593 0.81
12 26 0.17 11 7.0 0.5 1 12 607 618 607 624 0.81
13 26 0.17 11 7.0 0.5 1 12 638 649 638 655 0.81
14 26 0.17 11 7.0 0.5 1 12 669 680 669 686 0.81
15 26 0.17 11 7.0 0.5 1 12 700 711 700 717 0.81
16 26 0.17 11 7.0 0.5 1 12 754 765 754 771 0.81
17 26 0.17 11 7.0 0.5 1 12 785 796 785 802 0.81
18 26 0.17 11 7.0 0.5 1 12 816 827 816 833 0.81
19 26 0.17 11 7.0 0.5 1 12 847 858 847 864 0.81
20 26 0.17 11 7.0 0.5 1 12 878 889 878 895 0.81
21 26 0.17 11 7.0 0.5 1 12 909 920 909 926 0.81
22 26 0.17 11 7.0 0.5 1 12 940 951 940 957 0.81
23 26 0.17 11 7.0 0.5 1 12 971 982 971 988 0.81
24 26 0.17 11 7.0 0.5 1 12 1025 1036 1025 1042 0.81
25 26 6.4e-06 0.00043 20.8 1.0 1 23 1056 1078 1056 1078 0.98
26 26 0.0003 0.02 15.6 0.9 1 23 1084 1107 1084 1107 0.95

Sequence Information

Coding Sequence
ATGGAAACAATGAGTTTAGGTAATGAAGAAGACATTAAACTTGATTTTGAGCAAGCAAAAGCCATTTGTAGATGTTGTTTAATGACAGAAAGACGAATGTACAGTGCAGTAGTGTTCGAGGCGTTTTTCAAAGATCTTGCCGGTTTAAACGTCACAGAATCGGATGGCTTGCCTCAATGGTTGTGCTACGAATGTGCGAGTCTCCTGCAGAAGTCAGTCCGGTTCAAACATAAGGTGCTCCGAGCTCACACGATGCTCTACGAGTATCTCACGAGGTGTGCTCCATTTCCCATAGAGGCGCAAGATGAGGAGTTATCGAAGTATGCGACTCCTCACCTCAGCACCACGAGTGTACTCACCATTGATATTGTTGGTAGAGGAAAAGCTGGCTACCAGCAAGTGTTAGAGCATGAGAAACAAGTTCAGCCTTCAGGATTGGACGACATAGATATACAAATGATTAATAAAATGGATGATGATATCGTGAAAGAAGAAAATGGATTCTCAGACTATGAAGATAATATAACTTTAGAAGAATTTAGATCTGTAGCAACAAAAATTACAGAGGATGATATCGCCTCGCTACTACAAGAGACTGGAACAGTAGAGATCAAGGAGGAGCCGGTCGTGAAGAAGAGAAAAGCCAAGATTAAAGATGTTAAGGTGAAGAAGAAGAAAAAAGAGATTGATTCATCAACTGGTGATGGTACTGCGGCAGAAACTAAGTCTTCAATAAGGAAACCGATGGAATTAGATCCAACGAAAATTAGAATAGTAACTTTGAATCCTGAAGAACAGATCAAACAGCGAGAGGAAGAAAGTAAAGCTGGTTTAAAATTCCCGTTCCATTGTAACTTGTGCCATAAGGGTTTTAATTTTGAGTCCAAATTACAAAATCATATGAGCAAACATAGTCCGTCCCGCGGTCCTTACGAATGCAAGCTATGTCGGATGCATCTCCCGACCTCGTACAGCTTCAGTGTTCACTCTCTTATACATAATAGAAGATATGAGTGCGTCACGTGTGGAAGGAGGATGATCGATAGAGCTTCTATTGTAGATCATTACAGAACACAACACGAAGGGTTCCTTACATTGTACACTTGTCATCTTTGTGGGAAAGTATCCAATAACAATAAAACTCACCGCGGCCACATGCGGAACCACCACAGCGGCGACCGACCCAAGTGTGAGCAGTGCGGGAAGACCTTCATCAACAAGGACTCGCTGGTGGAACATCAGCAAATCCACCAGGGAATTAAGAACTACGAATGCTCGATATGCAACAAGCGTTTCCGAACGAGGACTCAGATCAAACATCACCAGCTCTCGCACACCGACGTCAAGGAATACTATTGTGTCGAGTGTGACGTCAGATTCAAGTCGGCGCACAGTCTGAGACAACATCTGCAGAAGAGCTTGAAACATCGAGATAGACAGAGTTTGAAGTTCGCATGTTCCCGCTGTTCGCTCCGCTTCCCGTCCGTGCGCACCCTGGAGGCGCACGTGTCGGTGCAGCACGACGGCGTGCGCGCGCACGTGTGCGGGGAGTGCGGGGCCGCGCTCGCCAGCAGGTCCTCGCTCAGCAAGCACTGCACCGCCGTGCACCGGGGACAGCGACCGCCGCCCCGGCATGTGTGTGATACCTGTGGGAAGGCATTCCGGGTGAGTCCATACAGCAAGCACTGCACCGCCGTGCACCGGGGACAGCGACCGCCGCCCCGGCATGTGTGTGATACCTGTGGGAAGGCATTCCGGGTGAGTCCATACAGCAAGCACTGCACCGCCGTGCACCGGGGACAGCGACCGCCGCCCCGGCATGTGTGTGATACCTGTGGGAAGGCATTCCGGGTGAGTCCATACAGCAAGCACTGCACCGCCGTGCACCGGGGACAGCGACCGCCGCCCCGGCATGTGTGTGATACCTGTGGGAAGGCATTCCGGGTGAGTCCATACAGCAAGCACTGCACCGCCGTGCACCGGGGACAGCGACCGCCGCCCCGGCATGTGTGTGATACCTGTGGGAAGGCATTCCGGGTGAGTCCATACAGCAAGCACTGCACCGCCGTGCACCGGGGACAGCGACCGCCGCCCCGGCATGTGTGTGATACCTGTGGGAAGGCATTCCGGGTGAGTCCATACAGCAAGCACTGCACCGGGGACAGCGACCGCCGCCCCGGCATGTGTGTGATACCTGTGGGAAGGCATTCCGGCAAGCACTGCACCGCCGTGCACCGGGGACAGCGACCGCCGCCCCGGCATGTGTGTGATACCTGTGGGAAGGCATTCCGGGTGAGTCCATACAGCAAGCACTGCACCGCCGTGCACCGGGGACAGCGACCGCCGCCCCGGCATGTGTGTGATACCTGTGGGAAGGCATTCCGGGTGAGTCCATACAGCAAGCACTGCACCGCCGTGCACCGGGGACAGCGACCGCCGCCCCGGCATGTGTGTGATACCTGTGGGAAGGCATTCCGGGTGAGTCCATACAGCAAGCACTGCACCGCCGTGCACCGGGGACAGCGACCGCCGCCCCGGCATGTGTGTGATACCTGTGGGAAGGCATTCCGGGTGAGTCCATACAGCAAGCACTGCACCGCCGTGCACCGGGGACAGCGACCGCCGCCCCGGCATGTGTGTGATACCTGTGGGAAGGCATTCCGGGTGAGTCCATACAGCAAGCACTGCACCGCCGTGCACCGGGGACAGCGACCGCCGCCCCGGCATGTGTGTGATACCTGTGGGAAGGCATTCCGGGTGAGTCCATACAGCAAGCACTGCACCGCCGTGCACCGGGGACAGCGACCGCCGCCCCGGCATGTGTGTGATACCTGTGGGAAGGCATTCCGGGTGAGTCCATACAGCAAGCACTGCACCGCCGTGCACCGGGGACAGCGACCGCCGCCCCGGCATGTGTGTGATACCTGTGGGAAGGCATTCCGGGTGAGTCCATACAGCAAGCACTGCACCGGGGACAGCGACCGCCGCCCCGGCATGTGTGTGATACCTGTGGGAAGGCATTCCGGCAAGCACTGCACCGCCGTGCACCGGGGACAGCGACCGCCGCCCCGGCATGTGTGTGATACCTGTGGGAAGGCATTCCGGGTGAGTCCATACAGCAAGCACTGCACCGCCGTGCACCGGGGACAGCGACCGCCGCCCCGGCATGTGTGTGATACCTGTGGGAAGGCATTCCGGGGTAAGAGTGTGCTAACGAACCACGTGCGCACTCACACGGGCGAGAAGCCGTTCTCGTGCGAGTCGTGCGGGCGCCGCTTCACTCAGCGCACCGCCATGCGCACGCACGTCAAGCTCGTGCATCTCAAGCTGCCCAGGACTGCCAAGGTGAAACCAGAGGTCTCGCTAGAGATGCCGTCTCCGAAACAAGATATCTTCAAGCCCGAGCCTATCGGGGAGCCCTGGAGACAGCCTTGTGATGTCTACTTCCAAGTCACCGCAGGCCCGTGA
Protein Sequence
METMSLGNEEDIKLDFEQAKAICRCCLMTERRMYSAVVFEAFFKDLAGLNVTESDGLPQWLCYECASLLQKSVRFKHKVLRAHTMLYEYLTRCAPFPIEAQDEELSKYATPHLSTTSVLTIDIVGRGKAGYQQVLEHEKQVQPSGLDDIDIQMINKMDDDIVKEENGFSDYEDNITLEEFRSVATKITEDDIASLLQETGTVEIKEEPVVKKRKAKIKDVKVKKKKKEIDSSTGDGTAAETKSSIRKPMELDPTKIRIVTLNPEEQIKQREEESKAGLKFPFHCNLCHKGFNFESKLQNHMSKHSPSRGPYECKLCRMHLPTSYSFSVHSLIHNRRYECVTCGRRMIDRASIVDHYRTQHEGFLTLYTCHLCGKVSNNNKTHRGHMRNHHSGDRPKCEQCGKTFINKDSLVEHQQIHQGIKNYECSICNKRFRTRTQIKHHQLSHTDVKEYYCVECDVRFKSAHSLRQHLQKSLKHRDRQSLKFACSRCSLRFPSVRTLEAHVSVQHDGVRAHVCGECGAALASRSSLSKHCTAVHRGQRPPPRHVCDTCGKAFRVSPYSKHCTAVHRGQRPPPRHVCDTCGKAFRVSPYSKHCTAVHRGQRPPPRHVCDTCGKAFRVSPYSKHCTAVHRGQRPPPRHVCDTCGKAFRVSPYSKHCTAVHRGQRPPPRHVCDTCGKAFRVSPYSKHCTAVHRGQRPPPRHVCDTCGKAFRVSPYSKHCTGDSDRRPGMCVIPVGRHSGKHCTAVHRGQRPPPRHVCDTCGKAFRVSPYSKHCTAVHRGQRPPPRHVCDTCGKAFRVSPYSKHCTAVHRGQRPPPRHVCDTCGKAFRVSPYSKHCTAVHRGQRPPPRHVCDTCGKAFRVSPYSKHCTAVHRGQRPPPRHVCDTCGKAFRVSPYSKHCTAVHRGQRPPPRHVCDTCGKAFRVSPYSKHCTAVHRGQRPPPRHVCDTCGKAFRVSPYSKHCTAVHRGQRPPPRHVCDTCGKAFRVSPYSKHCTGDSDRRPGMCVIPVGRHSGKHCTAVHRGQRPPPRHVCDTCGKAFRVSPYSKHCTAVHRGQRPPPRHVCDTCGKAFRGKSVLTNHVRTHTGEKPFSCESCGRRFTQRTAMRTHVKLVHLKLPRTAKVKPEVSLEMPSPKQDIFKPEPIGEPWRQPCDVYFQVTAGP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-