Aput004060.1
Basic Information
- Insect
- Agrotis puta
- Gene Symbol
- Zfy1
- Assembly
- GCA_943137145.2
- Location
- CALPBO020000147.1:1633133-1643697[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 4.5 3e+02 2.5 0.3 5 21 176 192 175 200 0.76 2 21 1.1 73 4.4 1.5 2 23 247 268 246 268 0.95 3 21 0.66 44 5.1 0.0 6 23 280 298 280 298 0.95 4 21 0.46 31 5.6 0.4 2 23 309 331 308 331 0.92 5 21 5.2e-07 3.5e-05 24.3 1.0 2 23 354 375 354 375 0.97 6 21 4.9e-05 0.0033 18.1 3.8 1 23 381 404 381 404 0.96 7 21 0.0044 0.3 11.9 0.1 1 23 410 432 410 432 0.97 8 21 1.6e-06 0.00011 22.7 2.0 1 23 438 460 438 460 0.98 9 21 6.3 4.2e+02 2.0 0.7 1 9 466 474 466 476 0.89 10 21 0.035 2.3 9.1 2.8 1 23 579 601 579 601 0.95 11 21 0.00044 0.03 15.1 2.0 2 23 608 630 607 630 0.92 12 21 2.5e-06 0.00016 22.2 1.2 1 23 636 658 636 658 0.98 13 21 1.4e-06 9.2e-05 22.9 4.4 1 23 664 686 664 686 0.98 14 21 0.00035 0.024 15.4 0.2 1 23 692 714 692 714 0.97 15 21 0.00082 0.055 14.2 0.2 1 23 720 742 720 742 0.91 16 21 0.00045 0.03 15.0 2.4 1 23 748 771 748 771 0.95 17 21 9e-06 0.0006 20.4 0.5 1 23 843 866 843 866 0.95 18 21 4.6e-06 0.00031 21.3 4.1 1 23 872 894 872 894 0.96 19 21 1.1e-05 0.00071 20.2 0.2 1 23 900 922 900 922 0.98 20 21 2.2e-05 0.0014 19.2 0.1 1 23 927 949 927 949 0.97 21 21 0.0072 0.48 11.3 5.2 5 23 958 976 955 976 0.96
Sequence Information
- Coding Sequence
- ATGAATAATGGAACTGAACAAATATTTTTACTAAATGCTGCTCCGAGTCAGTCTTCAGCACCTACGCAGAGGATGGGCGCCCTAGCACCGCCGCCGAGCTATCAGGTTAACCTAGATAATGTCGAAGACTTCTCACATGTGTGTCGGATATGTGCCACTATCACAGAGTCCGTCATGCCCATATTCTCCGGGGAGGGGCTCCAGAACAACCTGGCCGACAAGATAAAGAAACACTTACCAATTCAAGTCCGCGAGGGAGATAAGCTGCCGCTGGTGGTGTGCTACCAGTGCTCGAGCACGCTGCTGGCGTGGCACGAGCTCGTCAAGTGCTGCATGCAGGCCGACACCGCCTTGCGCGCCAAGCTCAGCTCCAACCAGCGGAAAACAAATCCACCGAACAATGTAATCATAAAATCAAACCCAAGCATACAAAATGATCCACAAGATGACAAGTTGTATTACGAGAGTGTCAGGAATGCTCTTACGGACTTTCATCTGGACGAAGATGATACAGATGTTGAGTTTGTTTGTCAAAAATGTTTTGCAAAACCAGCACTGACCACTGTGCACAGCCTCGCATACCATATTCGTGACGAACACTCTCCAGAAATAATCAACAACAGTGTGCAATCATTCATCACCAACCACGTCACGTTCGAACAAATGCTAGCTGAAGATTCTGACAGAGAAACACAATCTGACACTAAAGAGAAGCCACAAGTAGTTCTACCGAGCCTGCACTGTCCGTTCTGCGCAAGTGTGTTCTCGTCGGCAACGCGGTTACTGTACCATTTCAACAAACACGTGGAGGTGAGCATAGCGGACGGAGTCATGTGCTGCGATCTCGTGTACAGCGATAAGAAACTCTTCGTGCAACACTTGCAAGAGGCACACGTCGATAAGACACCGGAGGAACAAACACAAGTGTGCGTTAGCTGTGACTTCACGACCGACACAATTGATGAACTAAGACAGCACTACAAAGATAAACACAACGATGTGAAAAGCACGAAAGAGAAGAAAGTAGAGAGTCCAAATAACCAGAAGTACATTCCAGCAGTGTGCCCTGAGTGCAATAAGACGTTCTCCAACAAGTACAACATGTTCGTACACTTGCGCAGCCACTCGCGCGCCGCGGTCTACACGTGCGACAAGTGCACGCGCACCTACCGCAACCAGGGCAACCTCACCCACCACAAGAAGCTCGCACACCAGGGAATACTCAAATTCATGTGCGTGGAGTGCGGCGAGGGGTTCCCCAGCCGCTCAGAACGAGACAACCACGCGCGCATACACTCTGGGGAGACGCCCTACAAGTGCCCGCATTGCGGCAAGTCATACCGCGCCAAGAACACGCTCACGCGACATCTCGAGATACACGCAGACATACGCAAATATGAGTGCAAGATCTGCTCCAAAAAGAGCCCCTGCCACTCGCCTGAGGAGCCCCGCAGTGCTCATTCCGACCACTTCGAGCTGTCCGATGACAAGCCCAACAAAAATCTCTATTCCAACTTCTACAATGCCCTCGTAAACTTTAGAGATCATTTTGTGAATGATCAACATCATGAGGATTATCCTGACTTCACTGACTCTAGTGTGTCGGACGCCGAGAACAACGACGTGGATAGGTTCGACGACCTGACGCAGAGCAACATGCGCAGAGACCGGCTGGACGAGGAGACTAGACTGGAGCTGAGGGAAGTGCAGAACAAGATCGACAAGAAGACGTACTACACGTGTAAGATCTGCGGAAAAAACTTGAGCTCGGCGCACACGTACCTGTTCCACAAGCGCATCCACACGGGCGAGCGGCCGTGCGTGTGCCACGTGTGCGGCAAGCAGTTCCGTGCGCCCAATGGCCTACAGCGACACCTCACAGAGACGCACGAGCGCGTGCGCCGGTACAACTGCAGCCTCTGCACCAAGAACTTCGCCAACTCGCAAAATCTCAAGCAGCACATACGGATACACACGGGAGAGAAGCCTTTCGTGTGCTCGCACTGCGGGAAGAGGTTCACTCAGAGCGGATCGCTACACGTTCATCTGAAGACTCACAGCGAACAGTTCTCGTACGATTGCGCGGAGTGCGGCGCCAAGTTCAGGCTGCGCTCGGGCCTGGTGCGGCACCGGCTGAAGCACACGGGCGAGAGACCGCACGCGTGCGCCATCTGCGGCGCCGGCTTCCGCCAGCGACACGAGCTGCGTGCGCACGCCGCAGCACACAGCGGCACCGCGCCGCACGCGTGCGCCTCCTGCCCGCGCGCCTTCCGCCAGCGTCGCGCGCTGCGGCACCACATCAAGCGCGTGCACGAAGCCGAGCCGCCTGACCTCGGCCATACGACGACAGTACTGCCAGACGAAGAAAACGTCCAAGAAGACGACAAAAAACTCGAAGTCATCGAGAAACCGGAGTTAACGATAAGCGAGGATGGGAAACGATACGCTTTGTGTGGCGTGTGTCGGAAGAGCGTGTGTGTAGGAGGGTGGACGAGACACGTGCGCGCGCACCTTGGGGAGCGGCGCCACAGCTGTCACTGGTGCGGGCTGGCCTTCAACGACAGCGGCAACCTGGCGCGCCACGTGCGAGCCATCCACGCCAAGCAACGGCCGCACGCCTGCCCCACCTGCTCTAAAACATTCTCGCGGAAGTCGCACTTGGAAGACCACGTGAAGTCTCACTCGGAGAGCAGGACGTTTGTTTGTGACATATGCGGGAAGGGATCCAAGTCGAGCGCGGCACTCCGCATGCACACGCGCACGCACGACGCGTGCAGGTTCCCGTGTGTGCAGTGCGGCGCGCGGTTCAAGAGGCGCGGCGAGTTGTCCGCGCACATGTCCGTGCACACCGGGGAAAAGGCGCATTTCTGCCACTGTGGCAAAACATTTCGCCTGCGAAGTCAGCTGACCGTGCATAGTAGAGTGCATCAAAAGACCCAAAAGATGGACGATGGAGAAGATTTAACCAGTGCTGGGAATGCACTAGGGTTGTATAACATAGAAGAGATGCAATAA
- Protein Sequence
- MNNGTEQIFLLNAAPSQSSAPTQRMGALAPPPSYQVNLDNVEDFSHVCRICATITESVMPIFSGEGLQNNLADKIKKHLPIQVREGDKLPLVVCYQCSSTLLAWHELVKCCMQADTALRAKLSSNQRKTNPPNNVIIKSNPSIQNDPQDDKLYYESVRNALTDFHLDEDDTDVEFVCQKCFAKPALTTVHSLAYHIRDEHSPEIINNSVQSFITNHVTFEQMLAEDSDRETQSDTKEKPQVVLPSLHCPFCASVFSSATRLLYHFNKHVEVSIADGVMCCDLVYSDKKLFVQHLQEAHVDKTPEEQTQVCVSCDFTTDTIDELRQHYKDKHNDVKSTKEKKVESPNNQKYIPAVCPECNKTFSNKYNMFVHLRSHSRAAVYTCDKCTRTYRNQGNLTHHKKLAHQGILKFMCVECGEGFPSRSERDNHARIHSGETPYKCPHCGKSYRAKNTLTRHLEIHADIRKYECKICSKKSPCHSPEEPRSAHSDHFELSDDKPNKNLYSNFYNALVNFRDHFVNDQHHEDYPDFTDSSVSDAENNDVDRFDDLTQSNMRRDRLDEETRLELREVQNKIDKKTYYTCKICGKNLSSAHTYLFHKRIHTGERPCVCHVCGKQFRAPNGLQRHLTETHERVRRYNCSLCTKNFANSQNLKQHIRIHTGEKPFVCSHCGKRFTQSGSLHVHLKTHSEQFSYDCAECGAKFRLRSGLVRHRLKHTGERPHACAICGAGFRQRHELRAHAAAHSGTAPHACASCPRAFRQRRALRHHIKRVHEAEPPDLGHTTTVLPDEENVQEDDKKLEVIEKPELTISEDGKRYALCGVCRKSVCVGGWTRHVRAHLGERRHSCHWCGLAFNDSGNLARHVRAIHAKQRPHACPTCSKTFSRKSHLEDHVKSHSESRTFVCDICGKGSKSSAALRMHTRTHDACRFPCVQCGARFKRRGELSAHMSVHTGEKAHFCHCGKTFRLRSQLTVHSRVHQKTQKMDDGEDLTSAGNALGLYNIEEMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -