Aput015365.1
Basic Information
- Insect
- Agrotis puta
- Gene Symbol
- -
- Assembly
- GCA_943137145.2
- Location
- CALPBO020000762.1:210432-212738[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-07 0.00028 20.8 0.0 2 38 13 50 12 55 0.90 2 2 4.7 3e+03 -1.7 0.1 17 25 106 114 105 114 0.87
Sequence Information
- Coding Sequence
- ATGGATGACCCCAACAAGAAGAACAGAAAATACTCGGAGACCGATCTTAAAACCGCTGTTGAAAATGTTTTGAGTTCAACAATGACAGTTTACAGAGCTTCGAAGGAGTTTAAGATTCCATGGTCGACATTAAAAGAGAATGTGACGAAGTACAAAACTCTACGAGAGAGTAATCAAGATGCACAGATCGTAATGTCCAAGATAGGAAGGCCGTTTGCGTTACCTGTTGAAATAGAACAAAAGTTACTGGCCTATATTATTGAGATGCAAGAACGTGGTTTTGGTCTTACAGTTACCAAAATAAAGCAAATAGCATTATCTTTAGCAAAAGCTGCGAACATTTGCTGCACATTCAATGACAAAAAGGGATCTGCAGGTTGGAATTGGTGGGTGAAGTATAAAGAACGCTACGGGTTGTCTTTGCGAACACCGGAGAATCTTTCAGCAGGTAGAGCGATTTGTTCAAACCCGGTTATTTTAGAAGATTTTTATGAAAAATTAGAAAAACAGTTAAATGAACATGATATTCCACCCGAAAGAATATGGAATTGCGATGAAACTGGTCTGATGTTTGTCAACAAACCCAACAAAATTGTGACAAGCATTGGAAAAAAATATGTTTACAACAGAACATACGCAGAAAAGGGTACGACAACCACATTATTGGCGTGCATAGATGCGACAGGATGTTACATCCCCCCATTTATTATATTCAAAGGTGTAAGAATCATACCACAACTGACAAAAGGATTTATGCCAAACACCCAAGTACGATTTTCTCGAAAGGGATGGATCACGGGTGAACTATTCCTAGATTGGTTAAAATTCTATGTTCGATGTATCCCTCCAGCAAGACCCGTTCTATTGATAATGGACTCACACGCCAGTCACGTTACGCCTCCTGTACTGGATTACGCTCGATCACAACAAATAATATTGTTTACAATACCTTCTCACACGAGTGCGATTCTTCAACCACTTGATGTAAGTGTTCATCGACCTCTGAAAGTAGCCTGGAGGACAATAATCGAAACCCACAAAATGGAAAATCCTTGCCAAATCCCAAACCGCTATGATTTTCATAAATTTTTTACCCCTGCATTTGAAAAAAGCTTCACGCCATCTAACATACGAGCTGGGTTCAAAAAAGCGGGTATCTATCCGTTAAACAGAACAGCTGTGAATCCACTGGCACTTGCTCCATCAAAGTTGACAGACAAACCATTTCCAGAATCGGCAGAAGAGGTCACACTTCATAAAGATGAACAAACTCAAATTTTAGAGGAAACCGTATATTGCAACATTGACCAAGAAAATGGGTCCCTGGAAACAGATTACCTTGTGGATCTTTATTCAGCGTGTTCTCCATTAAAATGTGAAGAAAATGGATGTCTAAGAACAGGTGACTCTCTATGTGATCCTCTTCATTCAGCGGGTTTTCAATTTGAATGTGAAGAAAATGGGTCTTTCAAGATAGATGATCCTGTGTGTTATCCTCCTCATCCAGCGGATTCTCAATTTGAATGTGCCAAGCTACCTGTCCAGCTTGAAGAAGACGTAATTATAGATGATGTTCCGGGTCAGAATTCGCCTATCATTCATCAACAAAATATTAAAATAACTGATAGTACAAATATATTTGAGAACGACAATTCTGCAGAAAAAGAAACCAGCAGGCTCAGAAAAGTGAGAATTCCCTCAAAACGTCCTCATTGTAATGACACGATCTCAACTGCAACTGAATTGGGAATTTTAGACTCTTCCCAACACTGTCCTCAAATTACCCCCATTCAAGAAGTTTCATTTGAAACAGTTGAACCACTTAAACTAAATAAAACATTTAAAATTCGAATTTTAAATGAAGTTATAATTCCAGCTCCGGTACCTAAACAAAACTTCACAGTTCATTTAGATAAGATTTTAAAAGTGCCCAAGTTAGAGCAGAATCAAAATAAAAAAAAGAGAAGGACCGTCCCTCATGCACGATGTTTAACTCCTATGGCTGACAAGGACCTAAACGACGCTGCTGTTCCTAGCACGTCAAAATCTGAATCAAAAGTGAAACGAAGTAAGAGAGCAAATAAAAATAATACTGCACCTGCGAAGAAGAAAAATAGAACTGAAGACGGCGATTGGCTATGTGAAATATGTAAGAGATGGTACTCAGAAGATGCAGCTTCTAAAAATGGAGCAGACTGGATTTCTTGTTCCTTCTGCTCTAAAACGTACCACGTACATTGCCAAAGTCAAGAATTTGAGGCTATTGAGACGATTTTTAAGTGTGATATGTGTTGCGCCGAAGAATAA
- Protein Sequence
- MDDPNKKNRKYSETDLKTAVENVLSSTMTVYRASKEFKIPWSTLKENVTKYKTLRESNQDAQIVMSKIGRPFALPVEIEQKLLAYIIEMQERGFGLTVTKIKQIALSLAKAANICCTFNDKKGSAGWNWWVKYKERYGLSLRTPENLSAGRAICSNPVILEDFYEKLEKQLNEHDIPPERIWNCDETGLMFVNKPNKIVTSIGKKYVYNRTYAEKGTTTTLLACIDATGCYIPPFIIFKGVRIIPQLTKGFMPNTQVRFSRKGWITGELFLDWLKFYVRCIPPARPVLLIMDSHASHVTPPVLDYARSQQIILFTIPSHTSAILQPLDVSVHRPLKVAWRTIIETHKMENPCQIPNRYDFHKFFTPAFEKSFTPSNIRAGFKKAGIYPLNRTAVNPLALAPSKLTDKPFPESAEEVTLHKDEQTQILEETVYCNIDQENGSLETDYLVDLYSACSPLKCEENGCLRTGDSLCDPLHSAGFQFECEENGSFKIDDPVCYPPHPADSQFECAKLPVQLEEDVIIDDVPGQNSPIIHQQNIKITDSTNIFENDNSAEKETSRLRKVRIPSKRPHCNDTISTATELGILDSSQHCPQITPIQEVSFETVEPLKLNKTFKIRILNEVIIPAPVPKQNFTVHLDKILKVPKLEQNQNKKKRRTVPHARCLTPMADKDLNDAAVPSTSKSESKVKRSKRANKNNTAPAKKKNRTEDGDWLCEICKRWYSEDAASKNGADWISCSFCSKTYHVHCQSQEFEAIETIFKCDMCCAEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00042576;
- 90% Identity
- iTF_00042576;
- 80% Identity
- iTF_00042576;