Basic Information

Insect: Agrotis puta
Gene Symbol: -
Assembly: GCA_943137145.2
Location: CALPBO020001181.1:123503-126238[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.2e-08 1.4e-05 24.9 0.0 2 41 64 104 63 106 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.2e-08	1.4e-05	24.9	0.0	2	41	64	104	63	106	0.94

Sequence Information

Coding Sequence: ATGGGGAATGAGATAGGGGGAGAGAGAGAGAGGAGAATAAAGAGAGAGAGAGAGAGAGAGAGAAAGAAGAGCGAGATAGAGAGAGAAAGGAGAGAGAGAGAGAGTTTAGTAAAAAAAACACTCAAATCTCGCATTAAGCCAAGGAAGTCAAGACGTGAACTGGGATCGCGTATGTATAAAAATTATTCCGAAGAAATGCTCATGCTTGCGTGTGAAGCTGTCCAATCAGGTACAATTTCATCAAGAGATGCTGAAAAACAGTTCGGAATCCCAAGGCGGACCATAGTAAATAAAACAAAACGAGTACATATGAACCGCGTTGGTCGTCCTACTGCTTTAACAACCAAAGAAGAAGATCAAGTTGTTAAGGTCTTACAAGCATCAAGCAGTTTTGGCTCACCGCTTACAAAATTAGATCTTAAGCTATTGGTTTACGAATATTTAAAAAAGAACTCACGGAGTAATGCTTTTAACAATAAAATTCCTGGTGATGCATGGGTACATGGCTTTTTAGCAAGGCATGCCGATGCTTTGACATTAAGAACAACTCAAAATATTTGCAAGGCGAGGGCGGAAAAGGGAGCGCAAGAAATAATAGATTATTTTAGTAATTTAAGTACAACATTGAAAGACATACCACCTGAAAACATTGTCAATTTCGACGAAACTAACCTCTCCGATGACCCGGGATCTTCTAAGTGTATTTTTAGAAGAGGAGTAAAATATCCCGAGAGGGTAGTGAATTCTACCAAAGGGAACATATCTCTCATGTTTACTGCCACCGCAGCTGGTAAATGCCTCCCTTTATATGTAGTTTACAAAGCCACAAATTTATACACAGAATGGATTAATGGAGGACCACCAGAAACCAGGTACAATTGTACTAAGTCAGGCTGGTTTGACAGCTCCATGTTTGAAAATTATTTTGAAACAATAATACTTTCGTGGGCAAAAGAAACTGTGGGGACAAAAGTTGTCATTTGCGATAATCTATCTAGCCACATGAGTATCACAGTAGTAGAATTATGCGCTCAACACGATATCAAGTTAGTATTTATTCCTCCCCGATCAACACATTTGACGCAACCACTAGATGTGGCATTTTTTGCGCCCTTGAAAAGATGCTGGCGTAAAATTTTGTATCAGTATAAGCTCAAAAATCCGACACAAACTACATTAAATAAAAAACATTTTCCGAAGTTACTTTGCGAATTAACCGAAGCTATTAGGATGAATGAAAAAAGAAACATCATAAGTGGCTTTAAGGCAACAGGAATATTTCCATTGAATCCACAAGAAGTTCTTAAAAAAATACCGGAAACGCAAGAGGAAATAATATCATGTGGAATCGATCAAGTACTAGTGGATTATTTAACAGAGACCAGAATGCCAAAGCCTATGCAAGTATGGAGGAGTAAAAAAATCAATTGCGAGCCAGGAAAATCTGTGAGCATTTCTGATTTCAACGTTGACAATAAAAAAATTAAATCCATTAAAGCGTCTTATGTTGAAGAAGAAACAAACCACGGATCAGTCTATTTAGACGAAAAAACTGGTCTTTGTATACCAGAAATTGCTGATCTCTGTTCAGACATTGATGAAAATTATGCTCAAGACTTGGACCCTTGTAGTAGCCTACAGTGGCAAGATAGTATTCCTGAAAGTCTCAGCCAACAATGTATAAATGTAATGAATACCAATTTAAGTGTACCATTGTCAACATCATCCACTGATTTGAAAGCTTCCATAAATAATACCACAAACACATTAATGGCAAGAAATGATTCAGTTAAAAATAAGATTATTATACATTCTAATGTACTTATAAAAGCTGGAACACCAGCGACTGATGTTTGTTTTTTAAAAGATGCTTCCAGTAAGACTGAAAATATGCCGTTTATCTCTACACATAAAACTAATTTACCAGAATGCCTACAAGGGAAGAAAAATATATTAAAGAAGAAAATAGAACAGAAACATCCTAGAAAAGATAAGAAAAGTAATAAAGTCGAAAAAGTTAAAAATAATTCAAAAGGGAAAAAGTCAGCCCGAAGGCGTACTTCAATCAGAAGAAGACCACTATACGATAGTGAGTCGAGTGCGATATCAGTGGATAGTGAGTTTAAAACAGCTGACACAGATGATGAATACGAAACAATAAATGATTTTTACATTGCTGAATCCCTACAAGAACAAGAAGAGAAAGAAAACTTGGAGCTGCCAAATGTAATTTCCTTTGGACTACATGACATTGAATATTTTTCAGAAAATCGAGAAAAAATTAAAGAAAATGATTGGATTATTGTTCAGTTCGCTACAAAAAAGAGTTTAAAACATTTTGTAGGTAAGGTTTTGTCGATGAATGGTGTAAATCCTAAGGTAAAATTTTTACGGAAAGTTAAAGAATCCAAATTTGATACCGGAACTACTTTTTCATATCCAACGGTTGACGACATTTGCATCATACAACATTTAGAAGACGTTATAACCATTTTACCTTACCCAACGATTACTCGACGCGGACAGATTGTATTTCATGTAGATCTCAGTAATTTCAACATTCAATAA
Protein Sequence: MGNEIGGERERRIKRERERERKKSEIERERRERESLVKKTLKSRIKPRKSRRELGSRMYKNYSEEMLMLACEAVQSGTISSRDAEKQFGIPRRTIVNKTKRVHMNRVGRPTALTTKEEDQVVKVLQASSSFGSPLTKLDLKLLVYEYLKKNSRSNAFNNKIPGDAWVHGFLARHADALTLRTTQNICKARAEKGAQEIIDYFSNLSTTLKDIPPENIVNFDETNLSDDPGSSKCIFRRGVKYPERVVNSTKGNISLMFTATAAGKCLPLYVVYKATNLYTEWINGGPPETRYNCTKSGWFDSSMFENYFETIILSWAKETVGTKVVICDNLSSHMSITVVELCAQHDIKLVFIPPRSTHLTQPLDVAFFAPLKRCWRKILYQYKLKNPTQTTLNKKHFPKLLCELTEAIRMNEKRNIISGFKATGIFPLNPQEVLKKIPETQEEIISCGIDQVLVDYLTETRMPKPMQVWRSKKINCEPGKSVSISDFNVDNKKIKSIKASYVEEETNHGSVYLDEKTGLCIPEIADLCSDIDENYAQDLDPCSSLQWQDSIPESLSQQCINVMNTNLSVPLSTSSTDLKASINNTTNTLMARNDSVKNKIIIHSNVLIKAGTPATDVCFLKDASSKTENMPFISTHKTNLPECLQGKKNILKKKIEQKHPRKDKKSNKVEKVKNNSKGKKSARRRTSIRRRPLYDSESSAISVDSEFKTADTDDEYETINDFYIAESLQEQEEKENLELPNVISFGLHDIEYFSENREKIKENDWIIVQFATKKSLKHFVGKVLSMNGVNPKVKFLRKVKESKFDTGTTFSYPTVDDICIIQHLEDVITILPYPTITRRGQIVFHVDLSNFNIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -