Aput018445.1
Basic Information
- Insect
- Agrotis puta
- Gene Symbol
- clz9
- Assembly
- GCA_943137145.2
- Location
- CALPBO020001161.1:22051-24777[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-09 1.1e-06 28.5 0.0 3 38 20 56 18 59 0.92
Sequence Information
- Coding Sequence
- ATGCCAAGACACTACAAAAGAAAAGTAGGAAATCGCAGATACGTGGATTATTCCAAGGAGCAACTCGTAGAATGTTTGGCTAGGATACGATCCAAATCACTAACACAAAGAGCTGCTGCTGACCTATATGGCATTCCTCGCAGCAcgttaaaactcaaattaaaaaaaatagatggcaacaagcctggtcacccaacagtgttttctgaagatgaagagaattcatttgtggcccatataactgctttatcagagtttgggttccctttgactgacgttgatctccagtttattgttaaagattatttatcatcacaaggaagagaagtaagacaattcaaaaataatgttccgggaagagagtggataaaagcttttctcagaagacacaagagtttgtcaaagcgttttgcaaataatataaaaagaatcagagctcaagtttcagaaaataatatgaaagaattcatcgaaaatgtgagtacggaagtagactcagttccacctcaaaatgtttacaactatgatgaaacaaatctgacagatgacccaggaagaaaaaaagttatatgcaggcgtggatctaagtacccagaacgtgttttaaactctaccaaagtcagttattctgtcatgttctgcggaaatgctgctggaaccgcagtccctccttatattatatataagtcagagcatttATGGACTACGTGGACAGAAAATGGGCCCGATGGTGCACGTTATAATCGAACCAAGAGCGGCTGGATGGATTCTGTAACCTTTGAGGACTGGTTTATCCGCCATTTGTTGCCAATACTAAAAAAACAAGAAGGTCGAAAAGTTGTCATTGGAGACAACTTATCGTCGCACATCAGCAAAAATGTTTTGTTAGAATGCGAGAAACATAACATTAGCTTTATCTGCTTGCTTCCCAATGCTACTCACATCTTACAGCCGTTGGATGTAGCATATTTTCGGCCTTTAAAAATTAAATGGCGAGAAGAGTTGATGGCGTGGAAAGAAAGCCAGCAAGGTAGAAAACTCCCTTCAACGCCAAAAGAACTGTTTCCAAGTCTGTTGAAGAAGGCTCTCAATAAATTAACAGACACTTCCACCAATTTGATTTCTGGTTTTAGAAGATCAGGGATCTATCCACCAAATGTGGAAGAACCTCTAAAGAGGTTGCCAAAGCAAGACAGAATTGTTAACATTGACTTGATTGGAGACGTCTTCCTTCAAAAACTGGACCAGGCACGTAATTCTGACATAGCAACCGCAACTAAAACGATTAAAAAGAAAAAAATAGATGTGCCTGCAGGTCCTTCTATTTGTGCAAAAGACGTTTTAGATGCTGGACCTTCTGGCTGTCAGTCTAAATCCCGGAAAATGCTTCAACCAAAAACTACAAAGAAAGTCTTAAAGAAAAAGCCCGTATTATTTGAAAATTCTTCAACAGATTGCAGTGATGCTGATATTATTAGCCTTGCTTCATCTACAGAAGATCTTATCATGGCCTGTGAAGTACCGGAGGACTCTGAAGATGACATGCCATTAGCAACGCCCAATCCTCAGAGCAGTGATAGAGAAGACAAAACTATCTGTATCTCACCAGTACTGAAGCTTCCAACGCCCGATCCTCAGAGCTATGATAAAGAAGACAATGCTATCGGTGACTCACCAGTACTGTGGCTTCCGACGCCAGATCTTCAGAGCTATGATAAAGAAGACAATGCTTTCGGTGACTCACCAGTACTGAGGCTTCCGACGCCAGATCTTCAGAGTCTAGATGCTGGATACGAGGAAATAGGTCATGCTCAGAACTGCCATAAGGCAGAGAAAGCCGTTGCTGACTCACCACTACTAAAGCTTTCCACGCCTGATGCTCAGGTATGTGATAACAGAAATGAACCTTCGACGAACTCATCTTTGGTCTGTCTTCCAACACCCAATGATTATTCGATTGGTGATCACGTTATTGTTTTATGGAATTCTGTTAAATATCCTGGTCTAATCATATCCGAATCTGAAGAAGGAGCAATGGTTTCTTGTATGAAGAAATGTAAAGAATTTTGGCGATGGCCTGCCATAAAAGACGAGCAGCTTTATAGGTGGGAAGACTTGATAGAGAAGATTGGGATTCCCAAATTTATAAAGAAAGGGTGTTTCGTCGTGTCAGAACTGGATAAGGAAAACAAAGTTATCTGTGACTCACCAGTAGTGAAGCTTCCGACGCCCGATCCTCAGAGCTGTGATAGAGAAGACAATGCTATCGGTGACTCACCAGTACTGAAGCTTCCGACGCCAGACCTTCAGAGTCTAGATGCTGGATACGAGGATACAGGTCATGCTCAGAACTGCCATAAGGCAGAGAAAGCCGTTGCTGACTCACCACTACTAAAGCTTTCCACGCCTGATGCTCAGGTATGTGATAACGGAAATGAACCTTCGACGAACTCATCTTTGGTGTATCTTCCAACACCCAATGATTATTCGATTGGTGATCACGTTATTGTTTTATGGAATTCTGTTAAATATCCTGGTCTAATCATATCCGAAACTGAAGAAGGAGCAATGGTTTCTTGTATGAAGAAAAGTAAAGAATTTTGGCGATGGCCTGCCATAAAAGATGAGCAGTTTTATAGGTGGAAAGACGTGATTAAGAAGATTGGGATTCCTAAATTTATAAAGAAAGGGTGTTTCGTCGTGTCAGAACTGGATAAAAGTTCCTAA
- Protein Sequence
- MPRHYKRKVGNRRYVDYSKEQLVECLARIRSKSLTQRAAADLYGIPRSTLKLKLKKIDGNKPGHPTVFSEDEENSFVAHITALSEFGFPLTDVDLQFIVKDYLSSQGREVRQFKNNVPGREWIKAFLRRHKSLSKRFANNIKRIRAQVSENNMKEFIENVSTEVDSVPPQNVYNYDETNLTDDPGRKKVICRRGSKYPERVLNSTKVSYSVMFCGNAAGTAVPPYIIYKSEHLWTTWTENGPDGARYNRTKSGWMDSVTFEDWFIRHLLPILKKQEGRKVVIGDNLSSHISKNVLLECEKHNISFICLLPNATHILQPLDVAYFRPLKIKWREELMAWKESQQGRKLPSTPKELFPSLLKKALNKLTDTSTNLISGFRRSGIYPPNVEEPLKRLPKQDRIVNIDLIGDVFLQKLDQARNSDIATATKTIKKKKIDVPAGPSICAKDVLDAGPSGCQSKSRKMLQPKTTKKVLKKKPVLFENSSTDCSDADIISLASSTEDLIMACEVPEDSEDDMPLATPNPQSSDREDKTICISPVLKLPTPDPQSYDKEDNAIGDSPVLWLPTPDLQSYDKEDNAFGDSPVLRLPTPDLQSLDAGYEEIGHAQNCHKAEKAVADSPLLKLSTPDAQVCDNRNEPSTNSSLVCLPTPNDYSIGDHVIVLWNSVKYPGLIISESEEGAMVSCMKKCKEFWRWPAIKDEQLYRWEDLIEKIGIPKFIKKGCFVVSELDKENKVICDSPVVKLPTPDPQSCDREDNAIGDSPVLKLPTPDLQSLDAGYEDTGHAQNCHKAEKAVADSPLLKLSTPDAQVCDNGNEPSTNSSLVYLPTPNDYSIGDHVIVLWNSVKYPGLIISETEEGAMVSCMKKSKEFWRWPAIKDEQFYRWKDVIKKIGIPKFIKKGCFVVSELDKSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00363962;
- 90% Identity
- iTF_00111583;
- 80% Identity
- -